; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G007690 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G007690
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationCma_Chr04:3906567..3908384
RNA-Seq ExpressionCmaCh04G007690
SyntenyCmaCh04G007690
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-14596.25Show/hide
Query:  MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGF+PLGGGREPNYHLP  TTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEMGNFP+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQ  PPPPPNSASPDGG LLITAP+TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_022942307.1 protein SHORT INTERNODES-like [Cucurbita moschata]2.0e-14697.37Show/hide
Query:  MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFFPLGGGREPNYHLP  TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEM NFP+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQ-PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQ PPPPPNSASPDGGALLITAP+TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQ-PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_022982329.1 protein SHI RELATED SEQUENCE 1-like [Cucurbita maxima]1.2e-151100Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCC
        MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCC
Subjt:  MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCC

Query:  KSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQ
        KSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQ
Subjt:  KSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQ

Query:  QQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        QQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  QQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_023552309.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]1.3e-14595.9Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTT---TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
        MAGF+PLGGGREPNYHLPTTTT   TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
Subjt:  MAGFFPLGGGREPNYHLPTTTT---TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
        TCCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEMGN P+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
Subjt:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG

Query:  PEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        PEQQQQ  PPPPPNSASPDGGALLITAP+TTMELPPIS ALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  PEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_023552316.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-14395.15Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTT---TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
        MAGF+PLGGGREPNYHLPTTTT   TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
Subjt:  MAGFFPLGGGREPNYHLPTTTT---TDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
        TCCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASS  EMGN P+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
Subjt:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG

Query:  PEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        PEQQQQ  PPPPPNSASPDGGALLITAP+TTMELPPIS ALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  PEQQQQ--PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein6.2e-9866.9Show/hide
Query:  MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW-------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVI
        MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W       QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG V 
Subjt:  MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW-------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVI

Query:  SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQF
        SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSD  N KRP+D      SSGL+MGNFP EV++ AVFRCVRMT+LDET+DQ+
Subjt:  SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQF

Query:  AYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        AYQTAVNIGG  FKGILYDHGPE   QPPPPP+S+                     SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  AYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like4.0e-9766.67Show/hide
Query:  MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV
        MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV

Query:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV++ AVFRCVRMTTLDET+DQ
Subjt:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ

Query:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        +AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like4.0e-9766.67Show/hide
Query:  MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV
        MAGFFPL     GGR PNYH PT T        TT+GLFWY+NYE L  W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFFPL----GGGREPNYHLPTTT--------TTDGLFWYRNYESLGIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV

Query:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSD  N KRP+D      SSGL+M NFPMEV++ AVFRCVRMTTLDET+DQ
Subjt:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN--TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQ

Query:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        +AYQTAVNIGGH FKGILYDHGPE   QPPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like9.5e-14797.37Show/hide
Query:  MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFFPLGGGREPNYHLP  TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFFPLGGGREPNYHLP--TTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEM NFP+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQ-PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQ PPPPPNSASPDGGALLITAP+TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQ-PPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like5.7e-152100Show/hide
Query:  MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCC
        MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCC
Subjt:  MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCC

Query:  KSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQ
        KSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQ
Subjt:  KSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQ

Query:  QQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        QQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  QQQPPPPPNSASPDGGALLITAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 15.1e-4938.98Show/hide
Query:  MAGFFPLGGGREPNYHLPTT------TTTDGLFWYRN--------------YESLGIW----------QQQQVQQQ----------------------AG
        MA FF LGG +E  +   ++      T ++  F YRN              Y+   +W          Q  Q QQQ                      + 
Subjt:  MAGFFPLGGGREPNYHLPTT------TTTDGLFWYRN--------------YESLGIW----------QQQQVQQQ----------------------AG

Query:  EGF-VYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNL--------------
         GF + +GD    RS  VM+RSG  GGG  ISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER  +  A                 
Subjt:  EGF-VYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNL--------------

Query:  KRPRDNTAASS-----------GLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGG------
        KR R++ +ASS           GLE+G FP +V ++AVF+C++M+++++  DQ AYQ AV+IGGH FKGILYD G E Q          +  GG      
Subjt:  KRPRDNTAASS-----------GLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGG------

Query:  ------ALLITAPTTT-MELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
              A + TA TT+  +      +    P  +PAPL+T++ AGTQFF P  S
Subjt:  ------ALLITAPTTT-MELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

Q9FXH7 Protein SHI RELATED SEQUENCE 71.1e-4042.8Show/hide
Query:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN----------------
        D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTWV A+KRRER  +      KR RD                 
Subjt:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN----------------

Query:  -----------------TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA-----
                          A+SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP           S+S +G       
Subjt:  -----------------TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA-----

Query:  --LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF
          L+ + P+  TT  +  ++     +DP   Y A   P N +VA GT FF
Subjt:  --LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 51.6e-4241.35Show/hide
Query:  YRNYESLGIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC
        Y N +   IW           QQQQ QQ A         G V SG  S       RS    + S    GG  +      +CQDCGNQAKKDC HMRCRTC
Subjt:  YRNYESLGIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC

Query:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DATNLKRPRD--------------------------NTAASSGLEMG-NFPMEVSSTAVF
        CKSRGF C+THVKSTWVPA+KRRER         H  S  +  N KR R+                          N  ++SGLE+  + P EV+S A+F
Subjt:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DATNLKRPRD--------------------------NTAASSGLEMG-NFPMEVSSTAVF

Query:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPI--------SAALLDPPPPYPAPLNTYV
        RCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE Q          +     L  TA TT +E            +  +LDP   YPA LN+++
Subjt:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPI--------SAALLDPPPPYPAPLNTYV

Query:  AAGTQFFLPPTS
         AGT FF PP S
Subjt:  AAGTQFFLPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 11.5e-4848.99Show/hide
Query:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDATNL-------KRPRDNTAAS------
        ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+KRRER  +       T L       KR R+N  A+      
Subjt:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDATNL-------KRPRDNTAAS------

Query:  ------SGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPNSASPDGGAL---LITAPTTTMELP
              SGLE+GNFP EVSS+AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S+S  GGA    LITA + T+   
Subjt:  ------SGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPNSASPDGGAL---LITAPTTTMELP

Query:  PIS--------------AALLDPPPPYPAPLNTYVAAGTQFFLPPTS
          S              A  +DP   YP P+NT++ AGTQFF  P S
Subjt:  PIS--------------AALLDPPPPYPAPLNTYVAAGTQFFLPPTS

Q9XGX0 Protein SHORT INTERNODES1.4e-4940.24Show/hide
Query:  MAGFFPL---GGGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW----------QQQQVQQQ--------AGEGFVYSGDESPP
        MAGFF L   GGG  P+ H      P+++ T+   W RN  S              L +W          QQQQ QQQ        AG G   S      
Subjt:  MAGFFPL---GGGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW----------QQQQVQQQ--------AGEGFVYSGDESPP

Query:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-----------------------HLRSDATNLKR
         S  +L+M+RSG   GG   SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER                        + + +T++  
Subjt:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-----------------------HLRSDATNLKR

Query:  PRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP
         R  +  +SGLE+GNFP EVSS+AVFRCVR++++D+  +++AY+TAV+IGGH FKG+LYD GP ++         +S  GG+    L+   P+ +   P 
Subjt:  PRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP

Query:  ISA----------ALLDPPP-PYPAPLNTYVAAGTQFF
        +S             +DP    YP P+NT++  GT FF
Subjt:  ISA----------ALLDPPP-PYPAPLNTYVAAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 78.2e-4242.8Show/hide
Query:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN----------------
        D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTWV A+KRRER  +      KR RD                 
Subjt:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN----------------

Query:  -----------------TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA-----
                          A+SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP           S+S +G       
Subjt:  -----------------TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA-----

Query:  --LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF
          L+ + P+  TT  +  ++     +DP   Y A   P N +VA GT FF
Subjt:  --LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF

AT1G19790.2 SHI-related sequence 78.2e-4242.8Show/hide
Query:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN----------------
        D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTWV A+KRRER  +      KR RD                 
Subjt:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDATNLKRPRDN----------------

Query:  -----------------TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA-----
                          A+SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP           S+S +G       
Subjt:  -----------------TAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA-----

Query:  --LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF
          L+ + P+  TT  +  ++     +DP   Y A   P N +VA GT FF
Subjt:  --LLITAPT--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF

AT1G75520.1 SHI-related sequence 51.1e-4341.35Show/hide
Query:  YRNYESLGIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC
        Y N +   IW           QQQQ QQ A         G V SG  S       RS    + S    GG  +      +CQDCGNQAKKDC HMRCRTC
Subjt:  YRNYESLGIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC

Query:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DATNLKRPRD--------------------------NTAASSGLEMG-NFPMEVSSTAVF
        CKSRGF C+THVKSTWVPA+KRRER         H  S  +  N KR R+                          N  ++SGLE+  + P EV+S A+F
Subjt:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DATNLKRPRD--------------------------NTAASSGLEMG-NFPMEVSSTAVF

Query:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPI--------SAALLDPPPPYPAPLNTYV
        RCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE Q          +     L  TA TT +E            +  +LDP   YPA LN+++
Subjt:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLITAPTTTMELPPI--------SAALLDPPPPYPAPLNTYV

Query:  AAGTQFFLPPTS
         AGT FF PP S
Subjt:  AAGTQFFLPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related1.1e-4948.99Show/hide
Query:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDATNL-------KRPRDNTAAS------
        ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+KRRER  +       T L       KR R+N  A+      
Subjt:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDATNL-------KRPRDNTAAS------

Query:  ------SGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPNSASPDGGAL---LITAPTTTMELP
              SGLE+GNFP EVSS+AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S+S  GGA    LITA + T+   
Subjt:  ------SGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ----QQPPPPPNSASPDGGAL---LITAPTTTMELP

Query:  PIS--------------AALLDPPPPYPAPLNTYVAAGTQFFLPPTS
          S              A  +DP   YP P+NT++ AGTQFF  P S
Subjt:  PIS--------------AALLDPPPPYPAPLNTYVAAGTQFFLPPTS

AT5G66350.1 Lateral root primordium (LRP) protein-related9.6e-5140.24Show/hide
Query:  MAGFFPL---GGGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW----------QQQQVQQQ--------AGEGFVYSGDESPP
        MAGFF L   GGG  P+ H      P+++ T+   W RN  S              L +W          QQQQ QQQ        AG G   S      
Subjt:  MAGFFPL---GGGREPNYHL-----PTTTTTDGLFWYRNYES--------------LGIW----------QQQQVQQQ--------AGEGFVYSGDESPP

Query:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-----------------------HLRSDATNLKR
         S  +L+M+RSG   GG   SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER                        + + +T++  
Subjt:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRER-----------------------HLRSDATNLKR

Query:  PRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP
         R  +  +SGLE+GNFP EVSS+AVFRCVR++++D+  +++AY+TAV+IGGH FKG+LYD GP ++         +S  GG+    L+   P+ +   P 
Subjt:  PRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGA----LLITAPTTTMELPP

Query:  ISA----------ALLDPPP-PYPAPLNTYVAAGTQFF
        +S             +DP    YP P+NT++  GT FF
Subjt:  ISA----------ALLDPPP-PYPAPLNTYVAAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAAT
ATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGG
GAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCAC
GTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGA
AATGGGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACA
TCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATC
ACCGCCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATT
TTTTCTTCCCCCAACGTCTTAA
mRNA sequenceShow/hide mRNA sequence
GAATAAGAGAGAGAAAAGGTAATCAATCATGTCTGCGACTGCAACATAATCAGAGGATAGAGAAAGGGAAAGGGCTCAGAGAAGGCAGAGAAGAAAAACAGCAACAGCAA
CAAGAAGAAGAAGAAGAAGCAGCAGCAGCAGCGTATGAGTGGATATGGGACTTTAGTGGTGTATTTAAGTTAGCACTTCGCCCCTAAACAAAGCCCATGGCGGCGTTGCA
GACTTCACTTCAGTTTTAGACAGAGAGAGAAAAATACCCTTTAGTGTATTAGAGAGACAGAGACAGAGACAGAGAGATTTCAGAATCTGATTCCCAATTCGACCTCTTTT
CGACCTCTTTTCTACCTCCCCCCCCCCTTTCTTTTCTCTTGTAGTACGAAGAATTTGATTAAGAATTTCGAGAATTTGAGAAGGTAAGGAGAAAAAGTTGGAAAGGAATT
GATTGATACATACCCTTTTTACAACTCTGGCTTTCGATCGCCCTTGAGAGGTTGTTTCTGATATGGATTTTAATTCCAAATCAGGAATAGTATCTCCGGTGGAAATATGG
CCGGTTTTTTCCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGGAATATGG
CAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGG
GCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCA
AAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGCCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATG
GGGAATTTTCCGATGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGGATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGG
AGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGTGCCCTCCTCATCACCG
CCCCCACCACCACCATGGAATTGCCGCCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTT
CTTCCCCCAACGTCTTAATGTTGTAGCGAATTTTAAGAGATCGAAGAGAAATAGCTGAAATTGAGAAGGGGGAATGAAGGAAGTATATAATTTTTTATGATAAATTTATA
AGCTTGTAATTTTTCAAGAGTTCGCATTAATATGCCGCCATTGTTGGAACTTCGATGCAACCTTTTCCTTTTTTTTTTTCTTTCTTCTCGGTTTCGTATTTCGTAATTCT
CAATCTCTCAAACCCT
Protein sequenceShow/hide protein sequence
MAGFFPLGGGREPNYHLPTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETH
VKSTWVPASKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPNSASPDGGALLI
TAPTTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS