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CmaCh04G007760 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G007760
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionindeterminate(ID)-domain 4
Genome locationCma_Chr04:3954318..3956264
RNA-Seq ExpressionCmaCh04G007760
SyntenyCmaCh04G007760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600604.1 hypothetical protein SDJN03_05837, partial [Cucurbita argyrosperma subsp. sororia]1.9e-9080.37Show/hide
Query:  MGALQLHSISPSLHVCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFWHQRVQKRWHHHSQNLLY---------------------------FVRLL
        MGALQLHSISPSLHVCLEP PSCVHHNPSRALGDLNISQSSPIGKLILKFWHQRVQKRWHHHSQNLL+                           FVRLL
Subjt:  MGALQLHSISPSLHVCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFWHQRVQKRWHHHSQNLLY---------------------------FVRLL

Query:  LLLQPPQQPILHPTDATSSISSILKKRKLEEVLNWRPTFISEHLWRLFHFIGRCIFLQVRPAPHINFNLRLTLSSIISRNRIELITLGEIPEAALTTGRQ
         LLQPPQQPILHPTDA SSISSI KKRKLEEVLNWR TFISEHLWRLFHF+GRCIFLQVRPAPHINFNLRL LSSIISRNR       EIPEAALTTGRQ
Subjt:  LLLQPPQQPILHPTDATSSISSILKKRKLEEVLNWRPTFISEHLWRLFHFIGRCIFLQVRPAPHINFNLRLTLSSIISRNRIELITLGEIPEAALTTGRQ

Query:  ILDVLRSSLHFTWYRFYVD
        IL VLRSSLHFTWYRFYVD
Subjt:  ILDVLRSSLHFTWYRFYVD
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14580.1 C2H2-like zinc finger protein6.4e-0443.86Show/hide
Query:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
        V L PEPSCVHH+P+RALGDL   +     K   K W          VQ  W  HS+
Subjt:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
AT1G14580.2 C2H2-like zinc finger protein6.4e-0443.86Show/hide
Query:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
        V L PEPSCVHH+P+RALGDL   +     K   K W          VQ  W  HS+
Subjt:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
AT2G02070.1 indeterminate(ID)-domain 52.9e-0445.61Show/hide
Query:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
        V L PEPSCVHH+PSRALGDL   +     K   K W          VQ  W  HS+
Subjt:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
AT2G02080.1 indeterminate(ID)-domain 46.4e-0443.86Show/hide
Query:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
        V L PEP+CVHH+PSRALGDL   +     K   K W          VQ  W  HS+
Subjt:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
AT2G02080.2 indeterminate(ID)-domain 46.4e-0443.86Show/hide
Query:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ
        V L PEP+CVHH+PSRALGDL   +     K   K W          VQ  W  HS+
Subjt:  VCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFW-------HQRVQKRWHHHSQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTCTTCAACTCCATTCTATCTCTCCTTCCTTACATGTCTGCCTGGAGCCGGAGCCATCGTGCGTCCACCATAATCCGTCGAGGGCCCTTGGCGACCTCAACAT
TTCGCAGTCAAGTCCGATTGGAAAGCTCATTCTAAAATTTTGGCACCAGAGAGTACAGAAGAGATGGCATCATCACTCACAGAACCTTCTGTACTTCGTCCGCCTGCTCC
TCCTCCTTCAGCCGCCCCAACAGCCCATTCTCCATCCGACTGATGCGACATCGTCAATCTCGTCCATTCTGAAAAAAAGAAAACTGGAGGAGGTTTTGAATTGGCGCCCG
ACATTCATTTCGGAGCATCTTTGGCGATTGTTTCACTTCATAGGAAGATGCATTTTCCTTCAAGTTCGCCCGGCTCCTCATATTAACTTCAACCTTCGACTCACTCTCTC
GTCTATTATTTCCAGAAACCGAATTGAATTAATTACTCTTGGAGAGATTCCTGAGGCTGCGTTGACAACTGGCCGACAAATATTAGACGTATTGCGTAGCTCTCTTCATT
TCACCTGGTACAGGTTCTACGTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTCTTCAACTCCATTCTATCTCTCCTTCCTTACATGTCTGCCTGGAGCCGGAGCCATCGTGCGTCCACCATAATCCGTCGAGGGCCCTTGGCGACCTCAACAT
TTCGCAGTCAAGTCCGATTGGAAAGCTCATTCTAAAATTTTGGCACCAGAGAGTACAGAAGAGATGGCATCATCACTCACAGAACCTTCTGTACTTCGTCCGCCTGCTCC
TCCTCCTTCAGCCGCCCCAACAGCCCATTCTCCATCCGACTGATGCGACATCGTCAATCTCGTCCATTCTGAAAAAAAGAAAACTGGAGGAGGTTTTGAATTGGCGCCCG
ACATTCATTTCGGAGCATCTTTGGCGATTGTTTCACTTCATAGGAAGATGCATTTTCCTTCAAGTTCGCCCGGCTCCTCATATTAACTTCAACCTTCGACTCACTCTCTC
GTCTATTATTTCCAGAAACCGAATTGAATTAATTACTCTTGGAGAGATTCCTGAGGCTGCGTTGACAACTGGCCGACAAATATTAGACGTATTGCGTAGCTCTCTTCATT
TCACCTGGTACAGGTTCTACGTTGATTGA
Protein sequenceShow/hide protein sequence
MGALQLHSISPSLHVCLEPEPSCVHHNPSRALGDLNISQSSPIGKLILKFWHQRVQKRWHHHSQNLLYFVRLLLLLQPPQQPILHPTDATSSISSILKKRKLEEVLNWRP
TFISEHLWRLFHFIGRCIFLQVRPAPHINFNLRLTLSSIISRNRIELITLGEIPEAALTTGRQILDVLRSSLHFTWYRFYVD