; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G007770 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G007770
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein SA
Genome locationCma_Chr04:3956746..3958832
RNA-Seq ExpressionCmaCh04G007770
SyntenyCmaCh04G007770
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600605.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.8e-16798.36Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAP
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP  AAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAP
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAP

Query:  PAAS
        PAAS
Subjt:  PAAS

KAG7031241.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-16697.7Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAP
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP  AAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E G P
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP--AAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAP

Query:  PAAS
        PAA+
Subjt:  PAAS

XP_022942879.1 40S ribosomal protein SA-like [Cucurbita moschata]5.5e-16999.01Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

Query:  AS
        AS
Subjt:  AS

XP_022982113.1 40S ribosomal protein SA-like [Cucurbita maxima]3.4e-171100Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

Query:  AS
        AS
Subjt:  AS

XP_023554616.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]4.4e-16697.38Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP---AAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP   AAAAAAAPVSNVEWALEPVALG AADGWD AEAPPAPL E G 
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVP---AAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGA

Query:  PPAAS
        PPAAS
Subjt:  PPAAS

TrEMBL top hitse value%identityAlignment
A0A1S3BXR8 40S ribosomal protein SA7.5e-14888.37Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW  A  PPAP  E  APP+
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

Query:  A
        +
Subjt:  A

A0A5A7TNP4 40S ribosomal protein SA7.5e-14888.37Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATG EQRQL+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPG+KWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        VDLFFYREPEE KEKEEE+AVAPPDYGIADFG+APL  D+WV DAQWDA ++ P AAAA+  VSNVEWA EPV   GAADGW  A  PPAP  E  APP+
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

Query:  A
        +
Subjt:  A

A0A6J1C6Q9 40S ribosomal protein SA3.3e-15191.39Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGT QRQL+QKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTW+KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+R GHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEA-PPAPLPETGAPP
        VDLFFYREPEEAKE EEE+AVAPPDYGIADFGAAPL  D+W  DAQW A D+VP  AAAAAP SNVEWA EPVAL GAADGWDAA A PPAP  E GAPP
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEA-PPAPLPETGAPP

Query:  AA
        A+
Subjt:  AA

A0A6J1FSL7 40S ribosomal protein SA2.7e-16999.01Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWD AEAPPAPL E GAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

Query:  AS
        AS
Subjt:  AS

A0A6J1J410 40S ribosomal protein SA1.7e-171100Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

Query:  AS
        AS
Subjt:  AS

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA5.1e-12577.24Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MAT T  R L+QKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR T+ PGHKWDVM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAP---LVADRW---VADA-QWDAPDMVPAAAAAAAPVSN-VEWALEPVALGGAADGWDAAEAPPAPL
        VDLFFYREPEE KE+E ++ VA PDYGI D+ A     L    W   + DA QW A D+   A   A P SN  + A  P A+  A DGWDAA APP  +
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAP---LVADRW---VADA-QWDAPDMVPAAAAAAAPVSN-VEWALEPVALGGAADGWDAAEAPPAPL

Query:  PE---TGAPPAA
        P     G PP A
Subjt:  PE---TGAPPAA

O22518 40S ribosomal protein SA1.1e-12276Show/hide
Query:  ATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
        A     RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI
Subjt:  ATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAI

Query:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMV
        AGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDVMV
Subjt:  AGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMV

Query:  DLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA
        DLFFYREPEEAK++EEE+A A  DY I DF A  + AD +W         D VP    A   V  V W     A   A   W  A  PP  +P    PP+
Subjt:  DLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPA

O65751 40S ribosomal protein SA4.0e-12276.16Show/hide
Query:  MATGT-EQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH
        MAT T   RQLTQKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAH
Subjt:  MATGT-EQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RPG KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDV

Query:  MVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVA--DAQWD--APDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPE
        MVDLFFYREPEEAK+ EE++ VA PDY IADF  + + +D +W A  D  W+   P  +PA  A       V WA  P A+ G    W  A  PP  +P 
Subjt:  MVDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVAD-RWVA--DAQWD--APDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPE

Query:  TG
         G
Subjt:  TG

O80377 40S ribosomal protein SA3.8e-12076.61Show/hide
Query:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA
        MA+G   R+L+  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHA
Subjt:  MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHA

Query:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM
        IAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG +  GHKW+VM
Subjt:  IAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVM

Query:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPL-VADRW--VADAQWDAPDMVPAAAAAAAPVSNVEWA-LEPVALGGAADGWDAAEAPPAP
        VDLFFYREPEE K++EEE  +   DY +AD+ AAP+  AD+W  + DAQW    + PA +A  A      W    P+    A DGWDAA APP P
Subjt:  VDLFFYREPEEAKEKEEEQAVAPPDYGIADFGAAPL-VADRW--VADAQWDAPDMVPAAAAAAAPVSNVEWA-LEPVALGGAADGWDAAEAPPAP

Q9ZSR8 40S ribosomal protein SA1.9e-11674.47Show/hide
Query:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QL+QKEADI+MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKL MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+RP  KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEQAVAPPDYGI--ADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAP
        PEE K ++E++     ++G+   ++G         + DA W      P +AA AA   N     +  A   A  GWDAA  P
Subjt:  PEEAKEKEEEQAVAPPDYGI--ADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAP

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA4.0e-11773.72Show/hide
Query:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QL+QKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETG
        PEE K ++E++A    +YG        +V  D+W    + DA W      P +AA AA      W+    A   A  GW+AA APP+  P  G
Subjt:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETG

AT1G72370.2 40s ribosomal protein SA5.2e-11773.38Show/hide
Query:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG
        QL+QKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPG
Subjt:  QLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPG

Query:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE
        TFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+  G KWDVMVDLFFYRE
Subjt:  TFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYRE

Query:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETG
        PEE K ++E++A    +YG        +V  D+W    + DA W      P +AA AA      W+        A  GW+AA APP+  P  G
Subjt:  PEEAKEKEEEQAVAPPDYGIADFGAAPLV-ADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETG

AT3G04770.1 40s ribosomal protein SA B1.2e-10288.38Show/hide
Query:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        T  RQ+++KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVD
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMV+
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B2.9e-11572.07Show/hide
Query:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR
        T  RQ+++KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGR
Subjt:  TEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGR

Query:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLF
        HTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGT+    KWDVMVDLF
Subjt:  HTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLF

Query:  FYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPA
        FYREPEEAK++ +E+A    DYG+          D+W    ++DA W      P +AA A  V+              A GW+AA  P A
Subjt:  FYREPEEAKEKEEEQAVAPPDYGIADFGAAPLVADRW----VADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAACAGAACAGCGTCAACTCACGCAGAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAGATGGA
GCGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATTATTAACCTGGGCAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATCGAGAATCCTC
AAGACATTATTGTTCAGTCTGCCAGGCCTTATGGCCAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTC
ACCAACCAGCTTCAGACCTCATTCAACGAGCCACGTCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAAT
TGCCTTTTGCGACACTGATTCACCAATGCGGTATGTTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGG
TTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCACAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCTGAGGAGGCAAAGGAGAAAGAGGAAGAACAGGCA
GTTGCGCCACCAGATTATGGCATTGCAGATTTTGGTGCTGCTCCGCTGGTTGCAGATCGATGGGTTGCTGATGCTCAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGC
TGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGGCCCTAGAGCCAGTCGCTCTTGGAGGAGCAGCAGATGGATGGGATGCTGCAGAAGCACCACCAGCACCTTTACCGG
AAACTGGTGCACCTCCAGCCGCCAGTTAG
mRNA sequenceShow/hide mRNA sequence
TCCATTTGTTAGGGGCAGTGGTATTTTCGAAATTACATCAAGATGTTCAATATAACCTTCCCTACCCAGCATTCGTCTTCTTCAGCAGAGCCCTCTTAACCCGGCCGCCC
ATTCTCACTTCCACTTCTCGGTTTCTCCACTGACGGCGGTTCGCCATCTCTCGGCCGTCTCTCCAAGATTGAACAATGGCGACTGGAACAGAACAGCGTCAACTCACGCA
GAAGGAGGCGGACATTCAGATGATGTTGGCCGCTGAGGTTCATCTAGGTACTAAAAACTGCAATTTCCAGATGGAGCGATACGTTTTCAAGCGCCGGAATGATGGAATCT
ACATTATTAACCTGGGCAAAACATGGGAGAAACTTCAGATGGCTGCTAGAGTTATTGTGGCTATCGAGAATCCTCAAGACATTATTGTTCAGTCTGCCAGGCCTTATGGC
CAGAGAGCTGTTTTGAAGTTTGCACAATACACTGGTGCTCATGCAATTGCTGGGAGGCACACCCCTGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAGCCACG
TCTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCCCTTGGAAACATTCCTACAATTGCCTTTTGCGACACTGATTCACCAATGCGGTATG
TTGACATTGGGATTCCAGCTAATAACAAGGGGAAACACAGCATAGGATGTCTATTCTGGCTTCTTGCGAGGATGGTTTTGCAAATGCGTGGAACAGTTCGTCCTGGGCAC
AAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCTGAGGAGGCAAAGGAGAAAGAGGAAGAACAGGCAGTTGCGCCACCAGATTATGGCATTGCAGATTTTGG
TGCTGCTCCGCTGGTTGCAGATCGATGGGTTGCTGATGCTCAGTGGGATGCTCCTGATATGGTTCCAGCTGCTGCTGCTGCTGCTGCTCCAGTTTCTAATGTGGAGTGGG
CCCTAGAGCCAGTCGCTCTTGGAGGAGCAGCAGATGGATGGGATGCTGCAGAAGCACCACCAGCACCTTTACCGGAAACTGGTGCACCTCCAGCCGCCAGTTAG
Protein sequenceShow/hide protein sequence
MATGTEQRQLTQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTF
TNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTVRPGHKWDVMVDLFFYREPEEAKEKEEEQA
VAPPDYGIADFGAAPLVADRWVADAQWDAPDMVPAAAAAAAPVSNVEWALEPVALGGAADGWDAAEAPPAPLPETGAPPAAS