; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G007790 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G007790
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionATP-dependent DNA helicase DDM1
Genome locationCma_Chr04:3971220..3974465
RNA-Seq ExpressionCmaCh04G007790
SyntenyCmaCh04G007790
Gene Ontology termsGO:0044030 - regulation of DNA methylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004386 - helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0140658 - ATP-dependent chromatin remodeler activity (molecular function)
InterPro domainsIPR000330 - SNF2, N-terminal
IPR001650 - Helicase, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR038718 - SNF2-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136852.1 ATP-dependent DNA helicase DDM1 [Momordica charantia]4.5e-12277.21Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVE+MLPRKKEIIIYA++TEYQKNFQ+HL+NKTLE HL +KGSG                                 Y P+
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRLFA KHKVLIFSQWTK+LD+MEYYFSEKGFEVCRI+GGVKLDER+RQI+EFN+ +S YRIFILST+AGGLGINLT+ADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRILKRAFSKLKLEHVVIEKGQFH ER+K +SGA VEE DLLALL+EEDSAEDK+
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI

XP_022929281.1 ATP-dependent DNA helicase DDM1 [Cucurbita moschata]2.6e-12278.86Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRL A KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +EE DLLALLR+EDSAEDK I TD
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD

XP_022985070.1 ATP-dependent DNA helicase DDM1 [Cucurbita maxima]2.6e-12278.86Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRL A KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +EE DLLALLR+EDSAEDK I TD
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD

XP_023553491.1 ATP-dependent DNA helicase DDM1 [Cucurbita pepo subsp. pepo]2.6e-12278.86Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRL A KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +EE DLLALLR+EDSAEDK I TD
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD

XP_038877277.1 ATP-dependent DNA helicase DDM1 [Benincasa hispida]2.4e-12379.25Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        +VAKLH ILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHL+NKTLENHLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQ+VEQCGKF LLDRLLT+LFA KHKVLIFSQWTKILD+M+YYFSEKG+EVCRI+GGVKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQSI+GRILKRAFSKLKLEHVVIEKGQFH ERTK + G  VEE DLL LLRE DSAEDKI
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI

TrEMBL top hitse value%identityAlignment
A0A0A0KUD3 Uncharacterized protein3.7e-12278.23Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLH ILRPFLLRRMKSDVELMLPRKKEII+YANMTEYQKNFQEHL+NKTLENHL +KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQ+VEQCGKF LLDRLLTRLF  KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI
        LYDSDWNPQMDLQAMDRCHRIGQ+KPVHVYR ATAQSI+GRILKRAFSKLKLEHVVIEKGQFH ERTK  +   VEE D+LALLREEDSAEDK+
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI

A0A1S3BWZ3 ATP-dependent DNA helicase DDM18.2e-12278.23Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLH ILRPFLLRRMKSDVELMLPRKKEII+YA MTEYQKNFQEHL+NKTLENHLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQ+VEQCGKF LLDRLLTRLF  KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI
        LYDSDWNPQMDLQAMDRCHRIGQ+KPVHVYR ATAQSI+GRILKRAFSKLKLEHVVIEKGQFH ERTK +    VEE D+LALLREEDSAEDK+
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI

A0A6J1C6L0 ATP-dependent DNA helicase DDM12.2e-12277.21Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVE+MLPRKKEIIIYA++TEYQKNFQ+HL+NKTLE HL +KGSG                                 Y P+
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRLFA KHKVLIFSQWTK+LD+MEYYFSEKGFEVCRI+GGVKLDER+RQI+EFN+ +S YRIFILST+AGGLGINLT+ADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRILKRAFSKLKLEHVVIEKGQFH ER+K +SGA VEE DLLALL+EEDSAEDK+
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKI

A0A6J1EMP5 ATP-dependent DNA helicase DDM11.3e-12278.86Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRL A KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +EE DLLALLR+EDSAEDK I TD
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD

A0A6J1JAC1 ATP-dependent DNA helicase DDM11.3e-12278.86Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV
        VVAKLHAILRPFLLRRMKSDVELMLPRKKEII+YA MTE QKNFQEHLINKTLE+HLS+KGSG                                 Y PV
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSG---------------------------------YSPV

Query:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI
        EQIVEQCGKF LLDRLLTRL A KHKVLIFSQWTKILD+M+YYFSEKGFEVCRI+G VKLDERKRQIQEFND +S YRIFILST+AGGLGINLTAADTCI
Subjt:  EQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCI

Query:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR ATAQS++GRIL RAFSKLKLEHVVIEKGQFH ERTK +SGA +EE DLLALLR+EDSAEDK I TD
Subjt:  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD

SwissProt top hitse value%identityAlignment
F4JY24 ISWI chromatin-remodeling complex ATPase CHR174.4e-5643.01Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK + + L+ K LE                      NH      ++ G  Y+  + +V  
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G++ CRI+G    DER   I+ +N   S+  +F+LST+AGGLGINL  AD  ILYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ+DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + +LL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

O60264 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 51.3e-5242.8Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE------------------------NHL-----SDKGSGYSPVEQIV
        +V +LH +LRPFLLRR+K+DVE  LP KKE+ IY  +++ Q+ +   ++ K ++                        NH      ++ G  Y+    +V
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE------------------------NHL-----SDKGSGYSPVEQIV

Query:  EQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDS
           GK  +LD+LL +L     +VLIFSQ T++LD++E Y   + +E CR++G    DER+  I  +N+ +S   +F+LST+AGGLGINL  AD  ILYDS
Subjt:  EQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDS

Query:  DWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQ
        DWNPQ+DLQAMDR HRIGQTK V V+RF T  +++ RI++RA  KL+L+ +VI++G+
Subjt:  DWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQ

Q7G8Y3 Probable chromatin-remodeling complex ATPase chain2.6e-5643.37Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK +   L+ K LE                      NH      ++ G  Y+  E +VE 
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G++ CRI+G    ++R   I+ FN   S+  +F+LST+AGGLGINL  AD  +LYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + DLL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

Q8RWY3 ISWI chromatin-remodeling complex ATPase CHR112.9e-5542.65Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK + + L+ K LE                      NH      ++ G  Y+  + ++  
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G+  CRI+G    DER   I+ +N   S+  +F+LST+AGGLGINL  AD  ILYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ+DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + +LL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

Q9XFH4 ATP-dependent DNA helicase DDM11.8e-10566.89Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSD---KGSG-------------------------------YSP
        VV+KLH ILRPF+LRRMK DVEL LPRKKEII+YA MT++QK FQEHL+N TLE HL +   +G G                               Y P
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSD---KGSG-------------------------------YSP

Query:  VEQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTC
        VE+IV QCGKF LL+RLL RLFA  HKVLIFSQWTK+LD+M+YYFSEKGFEVCRI+G VKLDER+RQI++F+D  S   IF+LST+AGGLGINLTAADTC
Subjt:  VEQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTC

Query:  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR +TAQSI+ R+LKRA+SKLKLEHVVI +GQFH ER KS +   +EE D+LALL+E+++AEDK I TD
Subjt:  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD

Arabidopsis top hitse value%identityAlignment
AT3G06400.1 chromatin-remodeling protein 112.0e-5642.65Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK + + L+ K LE                      NH      ++ G  Y+  + ++  
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G+  CRI+G    DER   I+ +N   S+  +F+LST+AGGLGINL  AD  ILYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ+DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + +LL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

AT3G06400.3 chromatin-remodeling protein 112.0e-5642.65Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK + + L+ K LE                      NH      ++ G  Y+  + ++  
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G+  CRI+G    DER   I+ +N   S+  +F+LST+AGGLGINL  AD  ILYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ+DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + +LL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

AT5G18620.1 chromatin remodeling factor173.1e-5743.01Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK + + L+ K LE                      NH      ++ G  Y+  + +V  
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G++ CRI+G    DER   I+ +N   S+  +F+LST+AGGLGINL  AD  ILYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ+DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + +LL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

AT5G18620.2 chromatin remodeling factor173.1e-5743.01Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ
        VV +LH +LRPFLLRR+KSDVE  LP KKE I+   M++ QK + + L+ K LE                      NH      ++ G  Y+  + +V  
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLE----------------------NHL-----SDKGSGYSPVEQIVEQ

Query:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW
         GK  LLD+LL +L     +VLIFSQ T++LD++E Y   +G++ CRI+G    DER   I+ +N   S+  +F+LST+AGGLGINL  AD  ILYDSDW
Subjt:  CGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDW

Query:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR
        NPQ+DLQA DR HRIGQ K V V+RF T  +I+ ++++RA+ KL L+ +VI++G+   ++T       V + +LL ++R
Subjt:  NPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLR

AT5G66750.1 chromatin remodeling 11.3e-10666.89Show/hide
Query:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSD---KGSG-------------------------------YSP
        VV+KLH ILRPF+LRRMK DVEL LPRKKEII+YA MT++QK FQEHL+N TLE HL +   +G G                               Y P
Subjt:  VVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSD---KGSG-------------------------------YSP

Query:  VEQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTC
        VE+IV QCGKF LL+RLL RLFA  HKVLIFSQWTK+LD+M+YYFSEKGFEVCRI+G VKLDER+RQI++F+D  S   IF+LST+AGGLGINLTAADTC
Subjt:  VEQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEYYFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTC

Query:  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD
        ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYR +TAQSI+ R+LKRA+SKLKLEHVVI +GQFH ER KS +   +EE D+LALL+E+++AEDK I TD
Subjt:  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKLEHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDK-IDTD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTAGCAAAGCTGCATGCAATCCTGAGACCATTTCTACTTCGGAGAATGAAATCTGATGTTGAGCTAATGCTCCCTCGGAAAAAAGAAATCATAATTTATGCAAA
CATGACTGAGTATCAGAAGAACTTTCAGGAACATTTAATTAACAAGACATTGGAAAATCATCTCTCAGATAAGGGATCAGGATATTCTCCTGTAGAGCAGATAGTTGAGC
AGTGTGGAAAATTTTGCTTACTAGATAGATTGTTGACACGGTTATTTGCACCCAAGCATAAAGTCCTTATATTCTCTCAATGGACTAAGATTTTGGATCTCATGGAGTAC
TATTTTAGTGAGAAGGGATTTGAAGTTTGCAGAATCAATGGTGGTGTGAAACTAGATGAAAGAAAAAGACAGATCCAGGAGTTCAATGATGGTAGCAGCAAGTACAGGAT
ATTTATTTTAAGCACGCAGGCTGGTGGTCTGGGTATCAACCTTACTGCTGCAGATACTTGTATACTCTATGATAGCGATTGGAACCCACAAATGGATTTGCAGGCCATGG
ATAGGTGTCACAGGATAGGTCAAACGAAACCTGTACATGTTTACAGATTTGCAACCGCTCAGTCTATAGATGGCCGCATTCTGAAAAGGGCCTTTAGTAAGTTGAAGCTT
GAGCACGTGGTCATTGAGAAGGGGCAATTTCACCATGAACGGACAAAATCCGACTCTGGAGCTGCTGTAGAGGAAGCGGATCTATTAGCACTACTAAGAGAGGAAGATTC
TGCTGAAGACAAGATTGATACAGACAGACAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAGTGTCTCTTATAACATATAGCAATGGATTTTAGGAAACTTATAATCCTGAAAGCATATTTTTCTAGAAGGGGCATCGGCTGAAAAACTCAAAATGCAAATTGCTGAAG
GAGTTGAAGTATATAACTGTTGAAAATAAACTGCTGGGACACCCCTACAGAATAACTTGGCAGAGCTTTGGTCGTTGTTGAACTTTATTTTGTCAGTTGTCTTTTCATCC
AATGAAGAATTTGAGTCATGGTGGTAGCAAAGCTGCATGCAATCCTGAGACCATTTCTACTTCGGAGAATGAAATCTGATGTTGAGCTAATGCTCCCTCGGAAAAAAGAA
ATCATAATTTATGCAAACATGACTGAGTATCAGAAGAACTTTCAGGAACATTTAATTAACAAGACATTGGAAAATCATCTCTCAGATAAGGGATCAGGATATTCTCCTGT
AGAGCAGATAGTTGAGCAGTGTGGAAAATTTTGCTTACTAGATAGATTGTTGACACGGTTATTTGCACCCAAGCATAAAGTCCTTATATTCTCTCAATGGACTAAGATTT
TGGATCTCATGGAGTACTATTTTAGTGAGAAGGGATTTGAAGTTTGCAGAATCAATGGTGGTGTGAAACTAGATGAAAGAAAAAGACAGATCCAGGAGTTCAATGATGGT
AGCAGCAAGTACAGGATATTTATTTTAAGCACGCAGGCTGGTGGTCTGGGTATCAACCTTACTGCTGCAGATACTTGTATACTCTATGATAGCGATTGGAACCCACAAAT
GGATTTGCAGGCCATGGATAGGTGTCACAGGATAGGTCAAACGAAACCTGTACATGTTTACAGATTTGCAACCGCTCAGTCTATAGATGGCCGCATTCTGAAAAGGGCCT
TTAGTAAGTTGAAGCTTGAGCACGTGGTCATTGAGAAGGGGCAATTTCACCATGAACGGACAAAATCCGACTCTGGAGCTGCTGTAGAGGAAGCGGATCTATTAGCACTA
CTAAGAGAGGAAGATTCTGCTGAAGACAAGATTGATACAGACAGACAGAAGTGACGCTGATTTGGAGCGCATTTTAGACCGCTCTGATCTGGTTGTCCCATCTGGTTCAG
AGGATGAGAAAGCTAAAGTTAATGGTGAGTTATATCCTCTGAAAGGGCCTGGCTGGAAGGTGGTGATACCAACTTCAACAGGAGGGGTACTCTCTACCCTTAACTCTTAC
TATTAGCGCTAGGTTTGTGGGTGGGAACATGCATGTAGTTGAGGGTTTCTGGTTGCATGCAATTTTTGGTCCTCATAGTTGAACCGTCTTCTGCATCTGATATTGTAATC
TTCAGTGCAGAGTTTCTACGGTCCTAATTAAACC
Protein sequenceShow/hide protein sequence
MVVAKLHAILRPFLLRRMKSDVELMLPRKKEIIIYANMTEYQKNFQEHLINKTLENHLSDKGSGYSPVEQIVEQCGKFCLLDRLLTRLFAPKHKVLIFSQWTKILDLMEY
YFSEKGFEVCRINGGVKLDERKRQIQEFNDGSSKYRIFILSTQAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRFATAQSIDGRILKRAFSKLKL
EHVVIEKGQFHHERTKSDSGAAVEEADLLALLREEDSAEDKIDTDRQK