CuGenDBv2

Gene ID	CmaCh04G007830
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Genome location	Cma_Chr04:3992403..3993811
RNA-Seq Expression	CmaCh04G007830
Synteny	CmaCh04G007830
Gene Ontology terms	GO:0006099 - tricarboxylic acid cycle (biological process) GO:0006121 - mitochondrial electron transport, succinate to ubiquinone (biological process) GO:0005749 - mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) (cellular component) GO:0008177 - succinate dehydrogenase (ubiquinone) activity (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domains	IPR015939 - Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal IPR030664 - FAD-dependent oxidoreductase SdhA/FrdA/AprA IPR037099 - Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8664240.1 Succinate dehydrogenase flavoprotein subunit [Hibiscus syriacus]

2.9e-38

93.02

Show/hide

Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

XP_011099603.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Sesamum indicum]

2.9e-38

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

XP_022136565.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Momordica charantia]

1.7e-38

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD +ETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

XP_022775310.1 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial isoform X1 [Durio zibethinus]

2.9e-38

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

XP_039021075.1 LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial-like [Hibiscus syriacus]

2.9e-38

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

TrEMBL top hits

e value

%identity

Alignment

A0A6A2X5N1 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

1.4e-38

93.02

Show/hide

Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

A0A6A2Z0K0 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

1.4e-38

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

A0A6I9UMV9 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

1.4e-38

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

A0A6J1C499 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

8.2e-39

93.02

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD +ETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

A0A6P6BDX6 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

1.4e-38

93.02

Show/hide

Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDENWMKHTLG+WENEKVRLDYRPVHMNTLDDEV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

SwissProt top hits

e value

%identity

Alignment

O82663 Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial

2.8e-36

82.56

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IET+ELENLLINA IT+ SAEARKESRGAHAREDFTKR+D  WMKHTLG+WE+EKVRLDYRPVHM+TLDDE+ +FPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

Q1RHB9 Succinate dehydrogenase flavoprotein subunit

3.3e-21

59.77

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTL-GFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD +E +EL+NLL  A +T+ SA ARKESRGAHARED+  R+D+ WM+HTL G  E  KV LDY+PV + TL DEV + PP  RVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTL-GFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

Q6ZDY8 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

2.3e-38

88.37

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IETIELENLLINACIT+ SAEARKESRGAHAREDFTKRDDE WMKH+LG+WENEKVRL YRPVHMNTLD EV SFPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

Q92J97 Succinate dehydrogenase flavoprotein subunit

2.6e-21

60.92

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTL-GFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD +E +EL+NLL  A +T+ SA ARKESRGAHARED+  R+DE+WMKHTL    E  KV LDY+PV + TL DEV + PP  RVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTL-GFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

Q9ZPX5 Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial

1.4e-35

80.23

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Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IET+ELENLL+NACIT+ SAEARKESRGAHAREDFTKRDD NWMKHTLG+WE   V+L+YRPVHM TLDDEV +FPP+ RVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

Arabidopsis top hits

e value

%identity

Alignment

AT2G18450.1 succinate dehydrogenase 1-2

9.9e-37

80.23

Show/hide

Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IET+ELENLL+NACIT+ SAEARKESRGAHAREDFTKRDD NWMKHTLG+WE   V+L+YRPVHM TLDDEV +FPP+ RVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

AT5G66760.1 succinate dehydrogenase 1-1

2.0e-37

82.56

Show/hide

Query:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY
        NSD IET+ELENLLINA IT+ SAEARKESRGAHAREDFTKR+D  WMKHTLG+WE+EKVRLDYRPVHM+TLDDE+ +FPP+ARVY
Subjt:  NSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

Sequences

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CDS sequence

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mRNA sequence

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ATGAACTCTGATTCCATAGAGACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATTCCCTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACAT
GCTCGTGAAGATTTTACAAAAAGAGATGATGAGAACTGGATGAAGCACACGTTGGGATTCTGGGAGAATGAGAAGGTCAGACTGGACTATAGGCCAGTGCACATG
AACACATTGGACGATGAGGTCGGATCATTCCCTCCTCAGGCCCGTGTATACTGATCATCAAAGACTCTGGTAGTTTATTTACAATAATAGATGAAAGAAGACTGC
AATAAATCACTGTAGGCAAGCCATGTGGACGGAGATGGACGTTTATAAGCTACAAGCATGAATCATTCAAGTAGGAGATGTCACGGTTTTTTACTCAATAAATTG
CTTGAGGTAACTTTTCCGTCTCTAGTAACTTCTTTTTTTCTATGAACTATTTCATAATTGGCAACTGCATAGTTACAAATATACGAATGAGATCTTAGTTGGTTT
GGAAGTATCAATCGATCCGAGTCATTAGTCGTAGTCACATGTGCCCCAACCACACCAATACCACTGTTTCTGAATAAAGTTGGATTTATCATATCTGCCAAGTTG
GGGAGTCTGTATATCATCTTTTTCTTCCGCTACAATGATGAGAAAAATTTTCAATTGATTGAATTGAATGCATTTAGGAGTGGGGAAAAACGTGAGTGGTGTGTA
TTTGATCTTCTGTAGTGACAGTTTCTCCCACTTTGGCCTTATATTTTACTACTAAATTCCAACAAAGTAGTTGCTTCTTCTGTAGCATTTCCATTTCAGATTTGA
CCTGAAATACCAATCCTACAACATTAATGCTTATAATTCAATCTCAACCATTCATTGACATGAGTTGTAGATATTATTT

Protein sequence

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MNSDSIETIELENLLINACITIPSAEARKESRGAHAREDFTKRDDENWMKHTLGFWENEKVRLDYRPVHMNTLDDEVGSFPPQARVY

CmaCh04G007830 (gene) of Cucurbita maxima (Rimu) v1.1 genome