; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G009040 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G009040
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRING-type domain-containing protein
Genome locationCma_Chr04:4703906..4704508
RNA-Seq ExpressionCmaCh04G009040
SyntenyCmaCh04G009040
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060638.1 putative RING-H2 finger protein ATL19 [Cucumis melo var. makuwa]4.0e-5160.59Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR
        MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGST+LD H     D+EAGE N+NQ     ++    +   +  
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR

Query:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN
        GR ++ R ESN WRE +ERT+         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F VC HIFHYSCIQ WL++NMTCPICR  I N
Subjt:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN

Query:  QNC
          C
Subjt:  QNC

KAG6577373.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4054.64Show/hide
Query:  PQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSR-----
        P  NPPPS LPFLT+FSI+I+I +SI+IFS+LASF+II+ ++ +C+YL+  T LD H   D  + A ER          NQNQ+Q+ R R LVS      
Subjt:  PQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSR-----

Query:  --YESNIWREALERTMAERKGRRAQIVMKMAT-RVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPI
           E+  WRE L     ERKG R Q + K  T  V YGSSE  AK+ DCAICLE+FE GE CQIF VC HIFHY CIQRWL++NMTCPICR  I
Subjt:  --YESNIWREALERTMAERKGRRAQIVMKMAT-RVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPI

KAG6600727.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]2.9e-8992.46Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRS
        MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHH   LDVEAGER          NQNQNQTMRGRS
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRS

Query:  LVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN
        LVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYG SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN N
Subjt:  LVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN

KAG7027690.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3953.03Show/hide
Query:  PQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSR-----
        P  NPPPS LPFLT+FSI+I+I +SI+IFS+LASF+II+ ++ +C+YL+  T LD H   D  + A ER          NQNQ+Q+ R R LVS      
Subjt:  PQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSR-----

Query:  --YESNIWREALERTMAERKGRRAQIVMKMAT-RVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN
           E+  WRE L     ERKG R Q + K  T  V YGSSE  AK+ DCAICLE+FE GE CQIF VC HIFHY CIQRWL++NMTCPIC   I  ++
Subjt:  --YESNIWREALERTMAERKGRRAQIVMKMAT-RVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN

KAG7031368.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]2.8e-6891.67Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRS
        MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHH   LDVEAGER          NQNQNQTMRGRS
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRS

Query:  LVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVV
        LVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYG SEVAAKYTDCAICLEEFENGEDCQIFVV
Subjt:  LVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVV

TrEMBL top hitse value%identityAlignment
A0A0A0L6M6 RING-type domain-containing protein4.1e-4959.5Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQ---NNNQNQNQNQNQTMR
        MIPQAL TVPQSNPPPS LPFLTAFSIVIVI I+I+IFS++ASF+II+ I+V+C+YLIGST+LDGH     ++EAGE N+NQ     ++    +   +  
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQ---NNNQNQNQNQNQTMR

Query:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN
        GR ++ R ESN WRE +ERT+         ++ K+A  V YGSSE A K  DCAICLE+FENGE CQ F VC HIFHYSCIQ WL++NMTCPICR  I N
Subjt:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN

A0A5A7UZF7 Putative RING-H2 finger protein ATL191.9e-5160.59Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR
        MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGST+LD H     D+EAGE N+NQ     ++    +   +  
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR

Query:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN
        GR ++ R ESN WRE +ERT+         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F VC HIFHYSCIQ WL++NMTCPICR  I N
Subjt:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIAN

Query:  QNC
          C
Subjt:  QNC

A0A5D3BTV2 Putative RING-H2 finger protein ATL194.8e-3458.48Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR
        MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGST+LD H     D+EAGE N+NQ     ++    +   +  
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR

Query:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVV
        GR ++ R ESN WRE +ERT+         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F V
Subjt:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVV

A0A7N2R922 RING-type domain-containing protein5.4e-1735.75Show/hide
Query:  MIPQALTTVPQSNPPPSTLPF------LTAFSIVIVIIISIVIFSILASFSIIIFIFVL-CQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQN
        M+PQA   +  S PP     F      L    + I+III  +IF +++ F  I+ + ++ C++L        H     D+E GER  +Q  +   +  Q 
Subjt:  MIPQALTTVPQSNPPPSTLPF------LTAFSIVIVIIISIVIFSILASFSIIIFIFVL-CQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQN

Query:  QTMRGRSLVSRYESNIWREALERTMAE---RKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPI
                  R    IW  +L+R + +   RK +  Q + K+ + V YGS EVA+ Y  C ICLEEFENG+ CQ+F  C HIFH +CI RWL+R +TCPI
Subjt:  QTMRGRSLVSRYESNIWREALERTMAE---RKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPI

Query:  CRSPIAN
        CR  +++
Subjt:  CRSPIAN

E5GBS2 Uncharacterized protein8.2e-3458.58Show/hide
Query:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR
        MIPQAL TVPQSNPPPS LPFLTAFSIVIVI ISI+IFS++ASF+IIIFI+++C+YLIGST+LD H     D+EAGE N+NQ     ++    +   +  
Subjt:  MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQN---NNQNQNQNQNQTMR

Query:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIF
        GR ++ R ESN WRE +ERT+         ++ K+A  V YGSSEV AK  DCAICLE+FENGE CQ F
Subjt:  GRSLVSRYESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIF

SwissProt top hitse value%identityAlignment
Q8LGA5 E3 ubiquitin-protein ligase ATL312.3e-0948Show/hide
Query:  DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ
        +CAICL EFE+ E  ++   C H+FH  CI  WL+ ++TCP+CR+ +A Q
Subjt:  DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ

Q8RXX9 E3 ubiquitin-protein ligase ATL61.4e-0948Show/hide
Query:  DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ
        +CAICL EFE+ E  ++   C H+FH  CI  WL  ++TCP+CR+ +A Q
Subjt:  DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ

Q8W571 RING-H2 finger protein ATL323.0e-0937.18Show/hide
Query:  AERKGRRAQIVMKMATRVRYGS---SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRS
        + R+G     V++      Y S   S++ +K  +CAICL E E+ E  ++  +C H+FH  CI  WL  + TCP+CRS
Subjt:  AERKGRRAQIVMKMATRVRYGS---SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRS

Q9FGJ6 RING-H2 finger protein ATL791.6e-1043.94Show/hide
Query:  TRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN
        T V     E+A    +CAICL EFE GE  Q+   C+H FH  CI +WL    +CP CR+ I +Q+
Subjt:  TRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN

Q9LZV8 RING-H2 finger protein ATL741.2e-1043.42Show/hide
Query:  TMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICR
        T+A+R G + + + K      YGS EV    T+CAICL EF +GE  ++   C H FH SCI  WL  + +CP CR
Subjt:  TMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICR

Arabidopsis top hitse value%identityAlignment
AT3G05200.1 RING/U-box superfamily protein9.7e-1148Show/hide
Query:  DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ
        +CAICL EFE+ E  ++   C H+FH  CI  WL  ++TCP+CR+ +A Q
Subjt:  DCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQ

AT4G33565.1 RING/U-box superfamily protein1.8e-1242.86Show/hide
Query:  RYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN
        +Y   +   + TDC++CL EFE  E  ++   CKH FH  CI  WLR +  CP+CR+PI   N
Subjt:  RYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN

AT4G40070.1 RING/U-box superfamily protein2.2e-1037.18Show/hide
Query:  AERKGRRAQIVMKMATRVRYGS---SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRS
        + R+G     V++      Y S   S++ +K  +CAICL E E+ E  ++  +C H+FH  CI  WL  + TCP+CRS
Subjt:  AERKGRRAQIVMKMATRVRYGS---SEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRS

AT5G01880.1 RING/U-box superfamily protein8.7e-1243.42Show/hide
Query:  TMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICR
        T+A+R G + + + K      YGS EV    T+CAICL EF +GE  ++   C H FH SCI  WL  + +CP CR
Subjt:  TMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICR

AT5G47610.1 RING/U-box superfamily protein1.1e-1143.94Show/hide
Query:  TRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN
        T V     E+A    +CAICL EFE GE  Q+   C+H FH  CI +WL    +CP CR+ I +Q+
Subjt:  TRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCAAGCCCTTACTACTGTTCCACAATCCAACCCTCCTCCTTCAACCCTCCCGTTCCTCACCGCCTTCTCGATCGTCATCGTCATCATCATCTCCATT
GTCATCTTCTCCATCCTCGCCTCCTTTTCCATCATCATATTCATCTTCGTCTTGTGTCAATACCTAATCGGGTCAACGAACTTAGATGGGCACCATCTTGACGAT
CTTGACGTCGAAGCAGGCGAGAGAAACCAAAACCAAAACAATAACCAAAACCAAAACCAAAACCAAAACCAAACCATGCGGGGTAGAAGTTTGGTATCTCGATAC
GAAAGCAACATTTGGAGGGAGGCATTGGAGAGAACAATGGCGGAGAGGAAGGGGCGTAGAGCACAAATTGTAATGAAAATGGCAACGAGGGTGAGGTATGGCAGC
TCGGAGGTGGCGGCGAAATACACCGACTGTGCAATATGTTTGGAGGAGTTTGAGAATGGAGAGGATTGCCAGATTTTTGTCGTGTGTAAACACATTTTTCATTAC
TCTTGTATTCAACGTTGGCTTAGGAGGAACATGACTTGTCCTATTTGTCGTTCTCCTATTGCCAATCAAAACTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCAAGCCCTTACTACTGTTCCACAATCCAACCCTCCTCCTTCAACCCTCCCGTTCCTCACCGCCTTCTCGATCGTCATCGTCATCATCATCTCCATT
GTCATCTTCTCCATCCTCGCCTCCTTTTCCATCATCATATTCATCTTCGTCTTGTGTCAATACCTAATCGGGTCAACGAACTTAGATGGGCACCATCTTGACGAT
CTTGACGTCGAAGCAGGCGAGAGAAACCAAAACCAAAACAATAACCAAAACCAAAACCAAAACCAAAACCAAACCATGCGGGGTAGAAGTTTGGTATCTCGATAC
GAAAGCAACATTTGGAGGGAGGCATTGGAGAGAACAATGGCGGAGAGGAAGGGGCGTAGAGCACAAATTGTAATGAAAATGGCAACGAGGGTGAGGTATGGCAGC
TCGGAGGTGGCGGCGAAATACACCGACTGTGCAATATGTTTGGAGGAGTTTGAGAATGGAGAGGATTGCCAGATTTTTGTCGTGTGTAAACACATTTTTCATTAC
TCTTGTATTCAACGTTGGCTTAGGAGGAACATGACTTGTCCTATTTGTCGTTCTCCTATTGCCAATCAAAACTGCTGA
Protein sequenceShow/hide protein sequence
MIPQALTTVPQSNPPPSTLPFLTAFSIVIVIIISIVIFSILASFSIIIFIFVLCQYLIGSTNLDGHHLDDLDVEAGERNQNQNNNQNQNQNQNQTMRGRSLVSRY
ESNIWREALERTMAERKGRRAQIVMKMATRVRYGSSEVAAKYTDCAICLEEFENGEDCQIFVVCKHIFHYSCIQRWLRRNMTCPICRSPIANQNC