; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G009180 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G009180
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCma_Chr04:4748020..4749246
RNA-Seq ExpressionCmaCh04G009180
SyntenyCmaCh04G009180
Gene Ontology termsGO:0009635 - response to herbicide (biological process)
GO:0009644 - response to high light intensity (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0009769 - photosynthesis, light harvesting in photosystem II (biological process)
GO:0010119 - regulation of stomatal movement (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009517 - PSII associated light-harvesting complex II (cellular component)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0019904 - protein domain specific binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577394.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-14795.45Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        M+  ATST +LR TPFLGQ+R+S  N LRDVVAMGTPKYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

KAG6600741.1 Chlorophyll a-b binding protein 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-15299.24Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MSMAATSTAILRPTPFLGQ+RASS+NSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022943011.1 chlorophyll a-b binding protein 3, chloroplastic-like [Cucurbita moschata]4.1e-15298.86Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MSMAATSTAILRPTPFLGQ+RA S+NSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_022993918.1 chlorophyll a-b binding protein 3, chloroplastic [Cucurbita maxima]7.4e-154100Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

XP_023538245.1 chlorophyll a-b binding protein 3, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-15198.48Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MSMAATSTAILRP+PFLGQ+RASS NSLRDVVAMGTPKYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

TrEMBL top hitse value%identityAlignment
A0A6J1CN44 Chlorophyll a-b binding protein, chloroplastic1.8e-14593.94Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        M+  ATSTA+LRPTPFLGQ+R S  N LRDVVAMGT KYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCITPEVL KWL+V+FKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1ENC1 Chlorophyll a-b binding protein, chloroplastic6.6e-14895.45Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        M+  ATST +LR TPFLGQ+R+S  N LRDVVAMGTPKYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1FQJ2 Chlorophyll a-b binding protein, chloroplastic2.0e-15298.86Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MSMAATSTAILRPTPFLGQ+RA S+NSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1J4D4 Chlorophyll a-b binding protein, chloroplastic1.5e-14795.08Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        M+  AT+T +LR TPFLGQ+R+S  N LRDVVAMGTPKYTMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

A0A6J1K3P2 Chlorophyll a-b binding protein, chloroplastic3.6e-154100Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

SwissProt top hitse value%identityAlignment
P14278 Chlorophyll a-b binding protein 4, chloroplastic1.4e-9968.8Show/hide
Query:  STAILRPTPFLGQSRASSHNS-LRDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T  ++ + F+GQ+   S N  +R V   G  + TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  STAILRPTPFLGQSRASSHNS-LRDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC+ PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNLVHAQSILA+   QVVLMG VEG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+++PVANNAW YAT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27489 Chlorophyll a-b binding protein 13, chloroplastic1.4e-13988.26Show/hide
Query:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
        M+  A+ST +++ TPFLGQ++  + N LRDVVAMG+ ++TM N+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR
Subjt:  MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGR

Query:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD
        WAMLGA GCI PEVLEKW+KVDFKEPVWFKAG+QIFS+GGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGL GVGEGNDLYPGGQYFDPLGLAD
Subjt:  WAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLAD

Query:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        DP TFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF PG+
Subjt:  DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

P27494 Chlorophyll a-b binding protein 36, chloroplastic4.2e-9968.42Show/hide
Query:  STAILRPTPFLGQSRASSHNSL-RDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ +  + F GQ+   S N L R + +    + TM          +WYG DR KYLGPFS QTPSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH
Subjt:  STAILRPTPFLGQSRASSHNSL-RDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC+ PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILAV   QVVLMGL+EG+R+ G   +GEG D +YPGG  FDPLG
Subjt:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LADDP  FAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

P27523 Chlorophyll a-b binding protein of LHCII type III, chloroplastic2.5e-13687.07Show/hide
Query:  MAATSTAILRPTPFL-GQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
        MAA S A++  TPFL GQ RA+S + LRD+ A    + TMGN+LWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFA+NRALEVIHGRW
Subjt:  MAATSTAILRPTPFL-GQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW

Query:  AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
        AMLGA GC+ PEVL+KW+ V+FKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
Subjt:  AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL DHLD+PVANNAWV+ATKFAPGS
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Q9S7M0 Chlorophyll a-b binding protein 3, chloroplastic1.2e-14389.73Show/hide
Query:  SMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
        S   +S+++L PT FLGQ++ASS N LRDVV++G+PKYTMGN+LWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Subjt:  SMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW

Query:  AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
        AMLGAFGCITPEVL+KW++VDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
Subjt:  AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 33.4e-9665.31Show/hide
Query:  MAATSTAILRP---------TPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRA
        MAA++ A+  P         +P   +   S   ++R  VA   PK   G+  WYG DRVKYLGPFS ++PSYL GEFPGDYGWDTAGLSADPE FA+NR 
Subjt:  MAATSTAILRP---------TPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRA

Query:  LEVIHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQY
        LEVIH RWAMLGA GC+ PE+L +   V F E VWFKAG+QIFS+GGLDYLGNP+LVHAQSILA+   QV+LMG VEG+R+ G   +GE  D LYPGG  
Subjt:  LEVIHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQY

Query:  FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        FDPLGLA DP  FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PV NNAW +AT F PG
Subjt:  FDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05070.1 photosystem II light harvesting complex gene 2.22.8e-9866.92Show/hide
Query:  STAILRPTPFLGQSRAS-SHNSLRDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQ+    S + ++ V  +G  + TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STAILRPTPFLGQSRAS-SHNSLRDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC  PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT2G05100.1 photosystem II light harvesting complex gene 2.15.6e-9967.42Show/hide
Query:  STAILRPTPFLGQSRASSHNS-LRDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH
        +T+ ++ + F GQ+     N  LR V   G  + TM          +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEVIH
Subjt:  STAILRPTPFLGQSRASSHNS-LRDVVAMGTPKYTM-------GNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIH

Query:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG
         RWAMLGA GC  PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDPL 
Subjt:  GRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDPLG

Query:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DHL +PVANNAW YAT F PG+
Subjt:  LADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS

AT3G27690.1 photosystem II light harvesting complex gene 2.32.3e-9766.04Show/hide
Query:  STAILRPTPFLGQSRASSHNSL----------RDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV
        +T+ ++ + F GQ+     N L            ++   T K T    +WYGPDR KYLGPFS  TPSYL GE+PGDYGWDTAGLSADPE FAKNR LEV
Subjt:  STAILRPTPFLGQSRASSHNSL----------RDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV

Query:  IHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP
        IH RWAMLGA GC  PE+L K   V F E VWFKAG+QIFSEGGLDYLGNPNL+HAQSILA+   QVVLMG +EG+RI G   +GEG D LYPGG  FDP
Subjt:  IHGRWAMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGND-LYPGGQYFDP

Query:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG
        L LA+DP  F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ +PVANNAW YAT F PG
Subjt:  LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPG

AT5G54270.1 light-harvesting chlorophyll B-binding protein 38.8e-14589.73Show/hide
Query:  SMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
        S   +S+++L PT FLGQ++ASS N LRDVV++G+PKYTMGN+LWYGPDRVKYLGPFS QTPSYL GEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW
Subjt:  SMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW

Query:  AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
        AMLGAFGCITPEVL+KW++VDFKEPVWFKAG+QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD
Subjt:  AMLGAFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD

Query:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS
        PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAW +ATKFAPG+
Subjt:  PVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATGGCCGCCACCTCCACCGCCATCCTCCGCCCCACCCCTTTTCTCGGCCAAAGCAGAGCCTCTTCCCACAACTCCCTCAGAGATGTCGTCGCCATGGGA
ACTCCAAAATACACCATGGGAAATGAACTGTGGTATGGACCAGACAGAGTAAAGTACTTGGGGCCCTTTTCCGCTCAGACTCCCTCCTACCTGAATGGAGAGTTC
CCCGGCGATTATGGATGGGATACTGCTGGGTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAATCCACGGGAGGTGGGCGATGTTGGGA
GCCTTCGGGTGCATAACACCAGAAGTGCTAGAAAAATGGTTGAAAGTGGACTTCAAGGAGCCAGTCTGGTTCAAGGCCGGAGCCCAGATCTTCTCAGAAGGGGGG
CTCGACTACTTGGGGAACCCCAACCTGGTGCACGCCCAGAGCATCCTAGCCGTTTTGGGTTTCCAAGTGGTCCTAATGGGGCTGGTTGAAGGGTTCCGCATCAAC
GGGCTGGACGGCGTGGGCGAAGGCAACGACCTGTACCCAGGGGGTCAGTACTTCGACCCACTCGGACTGGCCGACGACCCCGTCACCTTCGCCGAGCTGAAGGTG
AAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATCGTTACTGGGAAAGGCCCCCTCGAGAACCTTCTCGACCATCTC
GATAACCCTGTGGCCAACAATGCTTGGGTTTACGCCACCAAGTTTGCCCCTGGCTCATAA
mRNA sequenceShow/hide mRNA sequence
CTGGGTCTTCCATTCTTCACCACTCATCTTCACCACTCATCTTCCCCATTTTCTCATAATATTCCCCCACTCGATTTCTCTCTTCTTCTCGCACCTTTCCCACAA
CTCTAACACACACCTCAACTACGATGTCGATGGCCGCCACCTCCACCGCCATCCTCCGCCCCACCCCTTTTCTCGGCCAAAGCAGAGCCTCTTCCCACAACTCCC
TCAGAGATGTCGTCGCCATGGGAACTCCAAAATACACCATGGGAAATGAACTGTGGTATGGACCAGACAGAGTAAAGTACTTGGGGCCCTTTTCCGCTCAGACTC
CCTCCTACCTGAATGGAGAGTTCCCCGGCGATTATGGATGGGATACTGCTGGGTTGTCCGCCGATCCCGAGGCCTTCGCCAAGAACAGAGCTCTTGAGGTAATCC
ACGGGAGGTGGGCGATGTTGGGAGCCTTCGGGTGCATAACACCAGAAGTGCTAGAAAAATGGTTGAAAGTGGACTTCAAGGAGCCAGTCTGGTTCAAGGCCGGAG
CCCAGATCTTCTCAGAAGGGGGGCTCGACTACTTGGGGAACCCCAACCTGGTGCACGCCCAGAGCATCCTAGCCGTTTTGGGTTTCCAAGTGGTCCTAATGGGGC
TGGTTGAAGGGTTCCGCATCAACGGGCTGGACGGCGTGGGCGAAGGCAACGACCTGTACCCAGGGGGTCAGTACTTCGACCCACTCGGACTGGCCGACGACCCCG
TCACCTTCGCCGAGCTGAAGGTGAAGGAGATCAAGAACGGGCGGCTGGCCATGTTCTCCATGTTCGGGTTCTTTGTTCAGGCCATCGTTACTGGGAAAGGCCCCC
TCGAGAACCTTCTCGACCATCTCGATAACCCTGTGGCCAACAATGCTTGGGTTTACGCCACCAAGTTTGCCCCTGGCTCATAATTAAGCGATGTGTGGTGGGTTC
GTCGATTAGAAGGCTGTGGATGTGATTATTAGAAGGCTGTGGATGTGATTATTAGAAGGCTGTGGATGTGATTATTAGAAGGCTG
Protein sequenceShow/hide protein sequence
MSMAATSTAILRPTPFLGQSRASSHNSLRDVVAMGTPKYTMGNELWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG
AFGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKV
KEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS