; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G009880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G009880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibosomal biogenesis, methyltransferase, EMG1/NEP
Genome locationCma_Chr04:5093988..5095225
RNA-Seq ExpressionCmaCh04G009880
SyntenyCmaCh04G009880
Gene Ontology termsNA
InterPro domainsIPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600811.1 hypothetical protein SDJN03_06044, partial [Cucurbita argyrosperma subsp. sororia]1.0e-9898.88Show/hide
Query:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
        MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVDSFREMLREVLSDQHRV QENDAIIWHNTNLQSLFSLIPQERRVI
Subjt:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI

Query:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
Subjt:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

KAG7031448.1 hypothetical protein SDJN02_05488 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-4397.8Show/hide
Query:  EVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVS
        EVLSDQHRV QENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKV+
Subjt:  EVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVS

XP_020208144.1 uncharacterized protein LOC109793088 [Cajanus cajan]4.7e-1128.74Show/hide
Query:  VEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIY-SPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWH-NTNLQSLFSLIPQERRVIGCL
        +E++ +T+   ++ I  S LN  G +  +Y+N G  GY ++  + R      +F   LR++         +ND +IW   +NL S+ S +P   + IGCL
Subjt:  VEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIY-SPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWH-NTNLQSLFSLIPQERRVIGCL

Query:  LEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNL
              ++  +   D++R      +  VFVVG       ++  ID +VKVSD     N C+  I  E + +WNL
Subjt:  LEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNL

XP_022942054.1 uncharacterized protein LOC111447242 [Cucurbita moschata]5.1e-9898.31Show/hide
Query:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
        MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVDSFREMLREVLSDQHRV QENDAIIWHNTNLQSLFSLIPQERRVI
Subjt:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI

Query:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTP NLCVRFICQECQRRWNLI
Subjt:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

XP_022989850.1 uncharacterized protein LOC111486913 [Cucurbita maxima]1.9e-100100Show/hide
Query:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
        MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
Subjt:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI

Query:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
Subjt:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

TrEMBL top hitse value%identityAlignment
A0A0A0KJD0 Uncharacterized protein1.7e-3585.39Show/hide
Query:  VVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLL
        VVDVIFTSLLNFLGRLGGLYINL GQGYLQI+SPRAFW+VDSFREMLREVLSDQHRV QENDAI+WH TNLQ+LF+  P+ERR+IG LL
Subjt:  VVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLL

A0A2P5AQ36 Ribosomal biogenesis, methyltransferase, EMG1/NEP6.5e-0625.97Show/hide
Query:  NDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYS----PRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQER
        N NP ++        + +I  S LN  GRL  +Y+       +++      PR F         L + LS      +E    +  N   Q L    P + 
Subjt:  NDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYS----PRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQER

Query:  RVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        R IG      Y + + +K+HD++    +   NLVFVVG   + ++  + +D Y+ VS        C+  ICQ  +R+WN++
Subjt:  RVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

A0A2P5ETQ5 Ribosomal biogenesis, methyltransferase, EMG1/NEP6.5e-0625.41Show/hide
Query:  NDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYS----PRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQER
        N NP ++        + +I  S LN  GRL  +Y+       +++      PR F         L + LS      ++    +  N   Q L    P + 
Subjt:  NDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYS----PRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQER

Query:  RVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        R IG      Y + + +K+HD++        NLVFVVG   + ++  + +D Y+ VS        C+  ICQ  +R+WN++
Subjt:  RVIGCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

A0A6J1FQ78 uncharacterized protein LOC1114472422.5e-9898.31Show/hide
Query:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
        MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINL GQGYLQIYSPRAFWDVDSFREMLREVLSDQHRV QENDAIIWHNTNLQSLFSLIPQERRVI
Subjt:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI

Query:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTP NLCVRFICQECQRRWNLI
Subjt:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

A0A6J1JNI2 uncharacterized protein LOC1114869139.1e-101100Show/hide
Query:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
        MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI
Subjt:  MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVI

Query:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
        GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI
Subjt:  GCLLEDQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACAACCCAGTAGAACATTTGGATTCTACTTACAGACATGTAGTGGATGTGATTTTTACGAGCCTTTTGAATTTTTTAGGCAGATTAGGCGGTCTCTAT
ATTAATCTAGGGGGTCAAGGCTATCTTCAAATTTATTCTCCTCGAGCCTTTTGGGATGTTGATTCATTTCGAGAAATGTTGCGTGAGGTGCTTAGTGATCAGCAT
AGGGTTCTGCAAGAGAATGATGCAATTATTTGGCATAATACAAATTTGCAGTCTTTGTTTAGTCTCATCCCTCAAGAGCGTCGAGTAATAGGGTGCTTGCTAGAG
GATCAGTATGGAAATAAACAAGAAATTAAGATTCATGACTTTTTGCGATTTTTGGTTCATCCTAATGAAAATTTGGTGTTTGTGGTCGGTGACTTTCGAAATTAC
AGAGTGCTCGAAGAAGAGATTGATCAATATGTCAAAGTTTCGGACCCCGGGACACCTACAAATCTGTGTGTCCGATTCATTTGTCAAGAATGTCAACGAAGATGG
AATCTTATATAA
mRNA sequenceShow/hide mRNA sequence
TGATTATTGGGTTTCTAAATCTTTTCATTTATCCATTTTTAAACATGATTATTATAAGTCAATTATAATTATCTTTTATTTTCTTCCTTTGTTCTTCAGGCTATC
CCTCCCATGAATGACAACCCAGTAGAACATTTGGATTCTACTTACAGACATGTAGTGGATGTGATTTTTACGAGCCTTTTGAATTTTTTAGGCAGATTAGGCGGT
CTCTATATTAATCTAGGGGGTCAAGGCTATCTTCAAATTTATTCTCCTCGAGCCTTTTGGGATGTTGATTCATTTCGAGAAATGTTGCGTGAGGTGCTTAGTGAT
CAGCATAGGGTTCTGCAAGAGAATGATGCAATTATTTGGCATAATACAAATTTGCAGTCTTTGTTTAGTCTCATCCCTCAAGAGCGTCGAGTAATAGGGTGCTTG
CTAGAGGATCAGTATGGAAATAAACAAGAAATTAAGATTCATGACTTTTTGCGATTTTTGGTTCATCCTAATGAAAATTTGGTGTTTGTGGTCGGTGACTTTCGA
AATTACAGAGTGCTCGAAGAAGAGATTGATCAATATGTCAAAGTTTCGGACCCCGGGACACCTACAAATCTGTGTGTCCGATTCATTTGTCAAGAATGTCAACGA
AGATGGAATCTTATATAAGGTTAAGAGTATCTCTAAACGAATGTCTCATGCTTAATGTCTTAGCTTGGATTTAACTTCTCAATAATTATCAAACGATGAACATTT
CATCGTATGGTTTTCGAGTTAAATTTGTTAATGCACATTTTCTCA
Protein sequenceShow/hide protein sequence
MNDNPVEHLDSTYRHVVDVIFTSLLNFLGRLGGLYINLGGQGYLQIYSPRAFWDVDSFREMLREVLSDQHRVLQENDAIIWHNTNLQSLFSLIPQERRVIGCLLE
DQYGNKQEIKIHDFLRFLVHPNENLVFVVGDFRNYRVLEEEIDQYVKVSDPGTPTNLCVRFICQECQRRWNLI