; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G010200 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G010200
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionubiquitin-conjugating enzyme E2 variant 1B-like
Genome locationCma_Chr04:5290013..5293467
RNA-Seq ExpressionCmaCh04G010200
SyntenyCmaCh04G010200
Gene Ontology termsGO:0006301 - postreplication repair (biological process)
GO:0070534 - protein K63-linked ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464712.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B-like [Cucumis melo]4.0e-8697.48Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        +NLLPMLAKWQREYTMEDILTQLKKEMMSS NRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

XP_022157781.1 ubiquitin-conjugating enzyme E2 variant 1B [Momordica charantia]6.2e-8798.74Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEM SSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

XP_022942022.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata]1.6e-8799.37Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

XP_022943228.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita moschata]8.9e-8698.11Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINM+CVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSS NRKLVQP EGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

XP_022990687.1 ubiquitin-conjugating enzyme E2 variant 1B-like [Cucurbita maxima]5.6e-88100Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

TrEMBL top hitse value%identityAlignment
A0A1S3CM86 ubiquitin-conjugating enzyme E2 variant 1B-like1.9e-8697.48Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        +NLLPMLAKWQREYTMEDILTQLKKEMMSS NRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1DZ79 ubiquitin-conjugating enzyme E2 variant 1B3.0e-8798.74Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEM SSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1FP33 ubiquitin-conjugating enzyme E2 variant 1B-like7.9e-8899.37Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKL QPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1JJH8 ubiquitin-conjugating enzyme E2 variant 1B-like2.7e-88100Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

A0A6J1JTK4 ubiquitin-conjugating enzyme E2 variant 1B-like4.3e-8698.11Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINM+CVNPETGMVE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        RNLLPMLAKWQREYTMEDILTQLKKEMMSS NRKLVQP EGNEEGRTEQKGLVLKCCIL
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

SwissProt top hitse value%identityAlignment
Q5F3Z3 Ubiquitin-conjugating enzyme E2 variant 23.3e-4356.93Show/hide
Query:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL
        GS V VPRNFRLLEELE G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY LK+ CG  YP+ PP VRF ++INM  +N   GMV+   +
Subjt:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL

Query:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG
        P+LAKWQ  Y+++ +L +L++ MMS +N KL QPPEG
Subjt:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG

Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A1.2e-6975.47Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
         +L PML  W+REYTMEDIL +LKKEMM+S NRKL QPPEGNEE R + KG   KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B2.0e-7277.99Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
         +  PML+ W+RE+TMED+L QLKKEMMSSQNRKL QP EGNEEGRT+ KGLV+KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C2.1e-6181.02Show/hide
Query:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL
        GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLFC KDYP+ PP VRF SRINMTCVN +TG+V+    
Subjt:  GSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLL

Query:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG
         +LA WQR+YTMEDILTQLKKEM +S NRKLVQPPEG
Subjt:  PMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG

Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D5.5e-6279.43Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG
             +LA WQREYTMEDIL QLKKEM +S NRKLVQPPEG
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG

Arabidopsis top hitse value%identityAlignment
AT1G23260.1 MMS ZWEI homologue 18.6e-7175.47Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        M SE ++VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ MQSWTGTI+GPPNT +EG+I+QLKLFCGK+YP++PP VRFQ+RINM CVNPETG+VE
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
         +L PML  W+REYTMEDIL +LKKEMM+S NRKL QPPEGNEE R + KG   KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

AT1G70650.2 Ran BP2/NZF zinc finger-like superfamily protein1.1e-7076.62Show/hide
Query:  SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLP
        + ++VPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+ +  P
Subjt:  SRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLP

Query:  MLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
        ML+ W+RE+TMED+L QLKKEMMSSQNRKL QP EGNEEGRT+ KGLV+KCC++
Subjt:  MLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

AT1G70660.1 MMS ZWEI homologue 21.4e-7377.99Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL
         +  PML+ W+RE+TMED+L QLKKEMMSSQNRKL QP EGNEEGRT+ KGLV+KCC++
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL

AT1G70660.2 MMS ZWEI homologue 28.4e-6679.17Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        MGSE  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+LMQSWTGTI+GP NT +EG+I+QLKLFCGKDYP++PP VRFQSRINM CVNPE G+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEE
         +  PML+ W+RE+TMED+L QLKKEMMSSQNRKL QP EGNEE
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEE

AT3G52560.1 ubiquitin E2 variant 1D-43.9e-6379.43Show/hide
Query:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE
        +GS GS VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DD+ M+SWTGTIIGP NTVHEGRIYQLKLFC KDYP+ PP VRF SR+NM CVN ETG+V+
Subjt:  MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVE

Query:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG
             +LA WQREYTMEDIL QLKKEM +S NRKLVQPPEG
Subjt:  RNLLPMLAKWQREYTMEDILTQLKKEMMSSQNRKLVQPPEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATGGCATGGA
TGATCCAGATGATTTGCTAATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGAAAGGATT
ATCCAGATAATCCACCGGCCGTTAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGCAAAATGG
CAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGTTCAGCCTCCTGAAGGGAACGAAGAGGGAAGGAC
AGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA
mRNA sequenceShow/hide mRNA sequence
GCCACTTAAACAGGGAGAAAACAGCGGTCATTGAGCGATGGCGGGTTCCTTTTTTTTTAGGCTTTTTGGTCCCAAAAGTATTATGGCCGCTTGGGCTTAATATCACTCAC
CCATTTCTCAAACCCAACTCTTTTACTTCCATCTCTCTCTCCTCCCTCTTTCTTAATTCTTTCATTCATCTAGAAACTTTCTGAACCTCTCTCTCTCTCTGTATTATTCT
ATGCTTCATGGGCTCTGAAGGATCCAGGGTGGTTGTTCCTAGGAATTTTAGATTATTGGAAGAGCTCGAGAGAGGTGAAAAGGGGATTGGGGATGGAACTGTCAGCTATG
GCATGGATGATCCAGATGATTTGCTAATGCAATCTTGGACTGGTACCATTATAGGTCCACCTAATACTGTTCATGAAGGGCGAATCTACCAATTGAAGCTATTTTGTGGA
AAGGATTATCCAGATAATCCACCGGCCGTTAGATTCCAAAGTAGGATAAACATGACATGTGTCAATCCCGAAACTGGAATGGTTGAAAGGAACCTCCTTCCCATGCTTGC
AAAATGGCAAAGGGAATACACAATGGAGGATATATTAACTCAATTGAAGAAAGAAATGATGTCCTCACAAAATAGGAAGCTGGTTCAGCCTCCTGAAGGGAACGAAGAGG
GAAGGACAGAACAAAAGGGGCTAGTCCTGAAATGTTGCATTCTTTGA
Protein sequenceShow/hide protein sequence
MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDPDDLLMQSWTGTIIGPPNTVHEGRIYQLKLFCGKDYPDNPPAVRFQSRINMTCVNPETGMVERNLLPMLAKW
QREYTMEDILTQLKKEMMSSQNRKLVQPPEGNEEGRTEQKGLVLKCCIL