CuGenDBv2

Gene ID	CmaCh04G010400
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	binding partner of ACD11 1-like
Genome location	Cma_Chr04:5389046..5390382
RNA-Seq Expression	CmaCh04G010400
Synteny	CmaCh04G010400
Gene Ontology terms	GO:0003723 - RNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022942419.1 binding partner of ACD11 1-like isoform X1 [Cucurbita moschata]

1.7e-140

99.28

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IAP+
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_022942420.1 binding partner of ACD11 1-like isoform X2 [Cucurbita moschata]

1.7e-140

99.28

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IAP+
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_022990263.1 binding partner of ACD11 1-like [Cucurbita maxima]

5.2e-142

100

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_023537354.1 binding partner of ACD11 1-like isoform X1 [Cucurbita pepo subsp. pepo]

1.2e-141

99.64

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA+EEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

XP_023537363.1 binding partner of ACD11 1-like isoform X2 [Cucurbita pepo subsp. pepo]

1.2e-141

99.64

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKA+EEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BT66 binding partner of ACD11 1-like isoform X2

2.8e-133

93.84

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISK TSERDIKEF SFSG+ILYVEMQRE+ENTQVAYVTY+DSQGADTAILLTGAKIGDL V+ITLVENYHLPPEAMSSILDKR+T TGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKA++AGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ESIY ERTGII+NFAE HLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A5A7UTK1 Binding partner of ACD11 1-like isoform X1

2.8e-133

93.84

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISK TSERDIKEF SFSG+ILYVEMQRE+ENTQVAYVTY+DSQGADTAILLTGAKIGDL V+ITLVENYHLPPEAMSSILDKR+T TGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQ TSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKA++AGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTK KVEKAEEEK+ESIY ERTGII+NFAE HLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A6J1FNT8 binding partner of ACD11 1-like isoform X2

8.2e-141

99.28

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IAP+
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A6J1FR87 binding partner of ACD11 1-like isoform X1

8.2e-141

99.28

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTAT IAP+
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

A0A6J1JSR7 binding partner of ACD11 1-like

2.5e-142

100

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
        YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

SwissProt top hits

e value

%identity

Alignment

P87216 Protein vip1

1.3e-05

26.57

Show/hide

Query:  VKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAE
        V V+NIS   +E+ I +F SF G++  +  ++  E TQ A + +E      TA+LL  A +G   + IT  +         +S  D+       A  Q +
Subjt:  VKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAE

Query:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVTEK---TKSALAVAEQKA-
             ++S +L++G+ L    L K+   D+   ++S          +  GI E   +G   VN      EK  E+D  F +++K   T S ++    KA 
Subjt:  D----VVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVN------EKVREMDEMFQVTEK---TKSALAVAEQKA-

Query:  -SNAGTA
         + AGT+
Subjt:  -SNAGTA

Q9LFD5 Binding partner of ACD11 1

6.6e-55

52.59

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        +R+VKV N+S   +E DIKEF SFSG++  +++Q    N   AYVT++++QGA+TA+LL+GA I D  V I L  NY  PP A  +  + + +       
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        +AEDVVS+MLAKGFILGKDA+ KAKAFDE+   TS A+A VAS+D+K+G+++K+TAGT++VNEK++ +D+ FQVTE+TKS  A AEQ  S+AG+A+M N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVE
        YVLTG +W + A   V +AA EV Q TK KVE
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVE

Arabidopsis top hits

e value

%identity

Alignment

AT1G67950.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.2e-67

54.61

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        ++TVK+SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I DL VSIT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A +A TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E ++E I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV

AT1G67950.2 RNA-binding (RRM/RBD/RNP motifs) family protein

1.2e-67

54.61

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN
        ++TVK+SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I DL VSIT   NY LPPEA++  LD   +  G +  
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPN

Query:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY
        +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A +A TALM+N 
Subjt:  QAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNY

Query:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV
        YV +GA+WFSNA  AVTKA +E       KVE   E ++E I               LD   P  PA+VPV
Subjt:  YVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV

AT1G67950.3 RNA-binding (RRM/RBD/RNP motifs) family protein

1.3e-66

54.41

Show/hide

Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRK-TATGIAP
        ++TVK+SN+S   S++D+KEF SFSG I YVEM+ ET+ +QVAYVT++DSQGA+TA+LLTGA I DL VSIT   NY LPPEA++  LD ++ +  G + 
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRK-TATGIAP

Query:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSN
         +AEDVV+ M+ +G+ LGKDA+ KAKAFD+R  L SNASAT+AS+D KMG++EK++ GT VVNEK+R++DE +QV E TKSALA AE+ A +A TALM+N
Subjt:  NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSN

Query:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV
         YV +GA+WFSNA  AVTKA +E       KVE   E ++E I               LD   P  PA+VPV
Subjt:  YYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPV

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein

3.7e-69

55.68

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Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSI----LDKRKTATG
        M TVKVSN+S   ++RD+KEF SFSG ILY+E Q ETE T++AYVT++D QGA+TA+LL+GA I D  V +++  +Y L PEA++S+     +K   A  
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSI----LDKRKTATG

Query:  IAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTAL
            +AEDVVS+MLAKGFILGKDA+ KAK+ DE+ QLTS ASA VAS D+K+G T+KI  GT VV EKVRE+D+ +QV+EKTKSA+A AEQ  SNAG+A+
Subjt:  IAPNQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTAL

Query:  MSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE
        M N YVLTGA W + A   V KAAEEV Q  K KV  AEEE       ++  +++ FA  HL E
Subjt:  MSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein

9.1e-68

53.36

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Query:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAP-
        M TVKVSN+S   +ERD+KEF SFSG I Y+E Q E + +++AYVT++D QGA+TA+LLTG+ I D  V++T+  +Y LPP+A++SI   +++    +P 
Subjt:  MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAP-

Query:  -------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNA
                +AEDVVS M++KGF+LGKDA+ KAK+ DE+ QLTS ASA V S D+++G TEKI  GT VV+EKV+E+D+ FQVTEKTKSA+A AEQ  SNA
Subjt:  -------NQAEDVVSTMLAKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNA

Query:  GTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE
        G+A+M N YVLTGA W + A   V+KAAEEV Q  K KV  AEEE+E     E+  +++  A  HL E
Subjt:  GTALMSNYYVLTGAAWFSNAVTAVTKAAEEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDE

Sequences

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CDS sequence

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ATGAGAACTGTCAAGGTCAGCAATATCTCAAAAGCTACTTCTGAGAGAGATATCAAAGAATTCCTTTCATTCTCTGGTCAAATCCTTTATGTTGAAATGCAAAGAGAAAC
TGAAAATACTCAGGTTGCTTATGTTACATACGAGGATTCTCAAGGAGCAGATACTGCAATACTTTTGACTGGGGCAAAAATTGGTGATCTATTTGTATCAATTACTCTGG
TTGAGAATTACCATCTTCCACCAGAAGCAATGTCATCAATCCTGGATAAAAGGAAAACTGCTACCGGGATTGCTCCGAATCAGGCTGAAGATGTTGTAAGTACAATGCTT
GCGAAAGGCTTCATCTTGGGGAAGGATGCTCTCAACAAGGCAAAAGCGTTCGACGAACGACTCCAATTGACATCAAACGCTTCTGCAACTGTTGCTTCCATTGACCGGAA
GATGGGCATAACTGAGAAAATAACTGCAGGCACAGCAGTGGTGAATGAAAAGGTCAGGGAGATGGATGAAATGTTCCAGGTTACGGAGAAGACAAAATCCGCTCTTGCAG
TTGCCGAGCAGAAGGCAAGCAATGCTGGAACCGCGCTCATGAGCAACTATTATGTGTTAACTGGAGCAGCTTGGTTTTCAAATGCTGTAACTGCAGTTACAAAAGCTGCC
GAGGAAGTGACCCAGATGACAAAGGCAAAAGTCGAGAAAGCCGAGGAGGAGAAAGAGGAAAGTATATACCACGAAAGAACCGGGATCATCAATAACTTCGCCGAGTTCCA
TCTCGACGAGCCTTTACCGGGGGAGCCTGCTATTGTTCCAGTTAATTCAGCTGATAGATAG

mRNA sequence

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Protein sequence

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MRTVKVSNISKATSERDIKEFLSFSGQILYVEMQRETENTQVAYVTYEDSQGADTAILLTGAKIGDLFVSITLVENYHLPPEAMSSILDKRKTATGIAPNQAEDVVSTML
AKGFILGKDALNKAKAFDERLQLTSNASATVASIDRKMGITEKITAGTAVVNEKVREMDEMFQVTEKTKSALAVAEQKASNAGTALMSNYYVLTGAAWFSNAVTAVTKAA
EEVTQMTKAKVEKAEEEKEESIYHERTGIINNFAEFHLDEPLPGEPAIVPVNSADR

CmaCh04G010400 (gene) of Cucurbita maxima (Rimu) v1.1 genome