CuGenDBv2

Gene ID	CmaCh04G010570
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	ubiquinol-cytochrome c reductase complex 6.7 kDa protein
Genome location	Cma_Chr04:5461708..5462881
RNA-Seq Expression	CmaCh04G010570
Synteny	CmaCh04G010570
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0067023.1 hypothetical protein E6C27_scaffold38G00590 [Cucumis melo var. makuwa]

8.7e-16

50.48

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Query:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWGVEEKTEDK
        M TGEKGLLKFL PKLRN LHPINIEA  LWSVAGTATA  L                                      QPFDWLKKK+W VEEK E++
Subjt:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWGVEEKTEDK

Query:  VQSDE
        VQ++E
Subjt:  VQSDE

KAG6600869.1 hypothetical protein SDJN03_06102, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-28

95.59

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Query:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
        MMTGEKGLLKF SPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIW VEEK EDKVQSDE
Subjt:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

KAG7031504.1 hypothetical protein SDJN02_05544, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-37

96.39

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Query:  MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
        MAPFELSKRYRNIKEMMTGEKGLLKF SPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIW VEEK EDKVQSDE
Subjt:  MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

KGN50751.1 hypothetical protein Csa_005826 [Cucumis sativus]

3.3e-23

82.35

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Query:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
        M TGEKGLLKFL PKLRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK E  VQ++E
Subjt:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

XP_022988689.1 ubiquinol-cytochrome c reductase complex 6.7 kDa protein [Cucurbita maxima]

1.5e-39

100

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Query:  MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
        MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
Subjt:  MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KSL8 Uncharacterized protein

1.6e-23

82.35

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Query:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
        M TGEKGLLKFL PKLRN LHPINIEAA LWSVAG ATALWLVQPFDWLKKK+W VEEK E  VQ++E
Subjt:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

A0A5A7VG06 Uncharacterized protein

4.2e-16

50.48

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Query:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWGVEEKTEDK
        M TGEKGLLKFL PKLRN LHPINIEA  LWSVAGTATA  L                                      QPFDWLKKK+W VEEK E++
Subjt:  MMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLV-------------------------------------QPFDWLKKKIWGVEEKTEDK

Query:  VQSDE
        VQ++E
Subjt:  VQSDE

A0A6J1JMA0 ubiquinol-cytochrome c reductase complex 6.7 kDa protein

7.1e-40

100

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Query:  MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
        MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE
Subjt:  MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

A0A7J8SZ03 Uncharacterized protein

5.0e-09

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Query:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTE
        M GE  + KFL P+LR +  PI+I+AA  W VA T TALWL+QPFDWLKK      +K+E
Subjt:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTE

A0A7J9FBL1 Uncharacterized protein

5.0e-09

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Query:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTE
        M GE  + KFL P+LR +  PI+I+AA  W VA T TALWL+QPFDWLKK      +K+E
Subjt:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTE

SwissProt top hits

e value

%identity

Alignment

P48505 Ubiquinol-cytochrome c reductase complex 6.7 kDa protein

1.4e-05

45.61

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Query:  GLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDK
        GL KFL PKLR +    +I+AA  W VA    ALW++QP+D+L+K    +E++ E+K
Subjt:  GLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDK

Q94K78 Cytochrome b-c1 complex subunit 10, mitochondrial

4.9e-06

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Query:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK
        M G  GLL  + PK++     I+I+AA  W +A  A A+W+VQPF W+KK
Subjt:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK

Arabidopsis top hits

e value

%identity

Alignment

AT2G40765.1 unknown protein

3.5e-07

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Query:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK
        M G  GLL  + PK++     I+I+AA  W +A  A A+W+VQPF W+KK
Subjt:  MTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKK

Sequences

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CDS sequence

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mRNA sequence

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ATGGCTCCTTTTGAGCTAAGTAAGAGATACAGAAACATAAAAGAAATGATGACAGGTGAAAAGGGTTTGTTGAAGTTCCTCAGCCCAAAGCTCCGGAACCGCCTG
CATCCCATCAACATCGAAGCTGCTGTGCTATGGAGTGTTGCAGGCACTGCCACTGCCCTTTGGCTTGTACAGCCATTTGACTGGTTGAAGAAGAAGATTTGGGGG
GTGGAGGAAAAAACAGAAGACAAGGTGCAAAGTGATGAATAAGATAGGAGTGTTGCAAAGGACTGTAATGCCTCTAATGTCAAATTCAAGCTTGGTGGGGATCAG
GAGCAGCATCAGAGTGTTGCTTGAGAGCTTGAAACACTTCAGAACTGGTACTGAAAATCTTAGCCCTCCTATTATAATCTGTAGGCTCTCTACCTTCATCTTCCC
CCATAATGGCTTCTCTTTCCAAACATTCAAGCAGCTCCACCACTCCCTTCCCCCCTCCGCCACATTTCTCATCCAACCTCCCTAGCTTCAGCCACTCTTCTATCT
CCTGCTCCGCCACAGAGCCCCCCCAACCACCCTGACTAACACATCTTGGCGCTGCCGCCGCAACCCGACGGCAGAACCATGGTGGGGAAATGGCTGAAATTGGCC
TGATCTTGGGGAAGACGACGGTGGAGGAGCGGTGGAAGAAGGATGGCGACGGTGGTGGTATTATGAGAGATGCAGAGACGACTTGCATGGTCGGTTTGGTGGGGG
GGGTGTTGATAAAATTATGGGCTTTTCAGTAATGGGCAGAAATTTTGGGGGAGAGGGAGTTTGTATTATAGAAAAATTTCAGAGTAAGAGAGGCACCGCCCCTGG
CCACCGTTTGGACGCCCACGTGGCAGTCCCTGCAATGGCACGTGGTCACGTGATCTCTCTTTATCATCAATATCTTTAACATTTTAGTTCAAATTATCAACAAAA
TAATAATACAAATATGAATATAATATTGGTGACAA

Protein sequence

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MAPFELSKRYRNIKEMMTGEKGLLKFLSPKLRNRLHPINIEAAVLWSVAGTATALWLVQPFDWLKKKIWGVEEKTEDKVQSDE

CmaCh04G010570 (gene) of Cucurbita maxima (Rimu) v1.1 genome