; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G011040 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G011040
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein S4
Genome locationCma_Chr04:5680045..5682591
RNA-Seq ExpressionCmaCh04G011040
SyntenyCmaCh04G011040
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000876 - Ribosomal protein S4e
IPR002942 - RNA-binding S4 domain
IPR005824 - KOW
IPR013843 - Ribosomal protein S4e, N-terminal
IPR013845 - Ribosomal protein S4e, central region
IPR014722 - Ribosomal protein L2, domain 2
IPR018199 - Ribosomal protein S4e, N-terminal, conserved site
IPR032277 - 40S ribosomal protein S4, C-terminal domain
IPR036986 - RNA-binding S4 domain superfamily
IPR038237 - Ribosomal protein S4e, central domain superfamily
IPR041982 - Ribosomal protein S4, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132117.1 40S ribosomal protein S4-3 [Momordica charantia]2.8e-14596.21Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVI+ILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_022957194.1 40S ribosomal protein S4-3 [Cucurbita moschata]3.0e-14799.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_022977127.1 40S ribosomal protein S4-3-like [Cucurbita maxima]6.1e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_023546337.1 40S ribosomal protein S4-3 [Cucurbita pepo subsp. pepo]4.0e-14799.24Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVG+LKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

XP_038900121.1 40S ribosomal protein S4-3 [Benincasa hispida]3.7e-14596.21Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVI+ILMQRH+LVDGKVRTDKT+PAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

TrEMBL top hitse value%identityAlignment
A0A6J1BSY6 40S ribosomal protein S41.4e-14596.21Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVI+ILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA +KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A6J1EP89 40S ribosomal protein S41.8e-14596.58Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVISILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVT
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVT

A0A6J1H190 40S ribosomal protein S41.5e-14799.62Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A6J1IHK6 40S ribosomal protein S43.0e-148100Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

A0A6J1JYT2 40S ribosomal protein S42.3e-14596.2Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVISILMQRH+LVDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHSVRDEEA FKLCK+RSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVT
        HKGSFET+HIQDATGHEFATRLGNVFT+GKGTKPWVSLPKGKGIKLSIIEEARKRLA+QAAVT
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVT

SwissProt top hitse value%identityAlignment
P46299 40S ribosomal protein S42.4e-13990.8Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPL+LILRNRLKYALTYREVI+ILMQRH++VDGKVRTDKTYPAGFMDVVSIPKTNE+FR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRF LH++  +E  FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+H+QDA GHEFATRLGNVFT+GKGTKPWVSLPK KGIKLSIIEEARKRLA+Q A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

P46300 40S ribosomal protein S46.1e-14392.42Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLV+I+RNRLKYALTYREVISILMQR ++VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS+RDEE+ FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKI DFIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA
        HKGSFET+HIQD+ GHEFATRLGNVFTLGKGTKPWVSLPKGKGIKL+IIE+ARKRLA+Q+A  A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

P49204 40S ribosomal protein S4-28.0e-14393.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+HIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

Q8VYK6 40S ribosomal protein S4-36.1e-14393.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+HIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

Q93VH9 40S ribosomal protein S4-14.0e-14292.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+HIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRL++Q A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

Arabidopsis top hitse value%identityAlignment
AT2G17360.1 Ribosomal protein S4 (RPS4A) family protein2.8e-14392.34Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+HIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRL++Q A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

AT2G17360.2 Ribosomal protein S4 (RPS4A) family protein1.4e-9793.37Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVG  V
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV

AT5G07090.1 Ribosomal protein S4 (RPS4A) family protein5.7e-14493.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+HIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

AT5G07090.2 Ribosomal protein S4 (RPS4A) family protein1.7e-13292.59Show/hide
Query:  MLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE
        MLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEE
Subjt:  MLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEE

Query:  AMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFETVHIQDATGHEF
        A FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREKHKGSFET+HIQD+TGHEF
Subjt:  AMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFETVHIQDATGHEF

Query:  ATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        ATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  ATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA

AT5G58420.1 Ribosomal protein S4 (RPS4A) family protein4.4e-14493.1Show/hide
Query:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR
        MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLI+RNRLKYALTYREVISILMQRHI VDGKVRTDKTYPAGFMDVVSIPKTNENFR
Subjt:  MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFR

Query:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK
        LLYDTKGRFRLHS++DEEA FKLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDLE+NKI +FIKFDVGNVVMVTGGRNRGRVG++KNREK
Subjt:  LLYDTKGRFRLHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREK

Query:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA
        HKGSFET+HIQD+TGHEFATRLGNV+T+GKGTKPWVSLPKGKGIKL+IIEEARKRLASQ A
Subjt:  HKGSFETVHIQDATGHEFATRLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAGGATTGAAGAAACATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCAGGACCTCATAA
ATCAAGGGAATGTCTCCCACTAGTCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTGATGCAACGACATATTTTAGTTGATG
GGAAGGTGAGGACTGACAAGACGTATCCGGCTGGCTTTATGGATGTTGTGTCCATCCCCAAGACAAATGAGAATTTCCGGCTTCTGTATGACACTAAAGGGCGTTTCCGC
CTTCACTCTGTCAGGGATGAGGAGGCTATGTTCAAGCTCTGTAAGGTTCGCTCTGTGCAGTTTGGGCAGAAGGGAATTCCTTATCTGAACACGTACGATGGGCGTACCAT
CCGTTATCCTGACCCCCTGATCAAGGCAAACGACACCATCAAGTTGGATCTTGAGTCTAACAAGATTGCTGATTTCATAAAGTTTGATGTAGGAAATGTTGTCATGGTGA
CTGGTGGACGAAACAGAGGTCGAGTGGGAATCCTTAAAAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAGTCCATATTCAGGATGCAACTGGGCATGAATTTGCGACT
CGGCTAGGCAACGTGTTCACGCTCGGGAAGGGAACCAAGCCATGGGTTTCCCTCCCCAAGGGCAAGGGTATAAAACTTTCCATCATTGAAGAAGCTAGGAAGAGGCTTGC
AAGCCAGGCAGCAGTTACTGCTTAA
mRNA sequenceShow/hide mRNA sequence
CGAACCTAATTTCTTGTTCGCCTCTTCCGAAGCTCCAGCTCTCTATCCGCAGGCGCCGGCGGCAATCTCACTGAAGGGTTTTTCTCCGTCGAACATCGTTTCGACAATAT
GGCAAGAGGATTGAAGAAACATTTGAAGAGGCTCAATGCTCCAAAGCATTGGATGCTCGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCAGGACCTCATAAAT
CAAGGGAATGTCTCCCACTAGTCCTCATATTGCGAAACCGATTGAAATATGCTCTCACATACCGTGAGGTAATTTCAATTTTGATGCAACGACATATTTTAGTTGATGGG
AAGGTGAGGACTGACAAGACGTATCCGGCTGGCTTTATGGATGTTGTGTCCATCCCCAAGACAAATGAGAATTTCCGGCTTCTGTATGACACTAAAGGGCGTTTCCGCCT
TCACTCTGTCAGGGATGAGGAGGCTATGTTCAAGCTCTGTAAGGTTCGCTCTGTGCAGTTTGGGCAGAAGGGAATTCCTTATCTGAACACGTACGATGGGCGTACCATCC
GTTATCCTGACCCCCTGATCAAGGCAAACGACACCATCAAGTTGGATCTTGAGTCTAACAAGATTGCTGATTTCATAAAGTTTGATGTAGGAAATGTTGTCATGGTGACT
GGTGGACGAAACAGAGGTCGAGTGGGAATCCTTAAAAACAGAGAGAAGCACAAGGGAAGCTTTGAGACAGTCCATATTCAGGATGCAACTGGGCATGAATTTGCGACTCG
GCTAGGCAACGTGTTCACGCTCGGGAAGGGAACCAAGCCATGGGTTTCCCTCCCCAAGGGCAAGGGTATAAAACTTTCCATCATTGAAGAAGCTAGGAAGAGGCTTGCAA
GCCAGGCAGCAGTTACTGCTTAAGAGTTTTTGTTGTTGTAGTCATGGATTTTCAATGGTTTTGATTTGGCACATCTGTTTCTTGAATTTTGCTTTCTTGATCATTTATGG
GTAAGTTGAGATCTTTTGAGACAATTTATTTCTACTAGAAACTTGTGGAGGCTGTTGCTTCTATATCATGATTTTGTGGTTCAAAAATACTTACAGTGGACTGAGGCCGA
GTTTGCTGATTTATAGTGTTGTGACTCTGCTCTACCCTCAATTTTATTTCTCCACCGGCTTTTTTTTTAAGAAATGAG
Protein sequenceShow/hide protein sequence
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLILRNRLKYALTYREVISILMQRHILVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFR
LHSVRDEEAMFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVVMVTGGRNRGRVGILKNREKHKGSFETVHIQDATGHEFAT
RLGNVFTLGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA