; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G011950 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G011950
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionserine/arginine-rich SC35-like splicing factor SCL30
Genome locationCma_Chr04:6093381..6095871
RNA-Seq ExpressionCmaCh04G011950
SyntenyCmaCh04G011950
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601004.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. sororia]1.3e-9998.98Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
        WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD  GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH

KAG7031619.1 Serine/arginine-rich SC35-like splicing factor SCL30, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-102100Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_022957588.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita moschata]8.0e-10299.49Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_022987464.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita maxima]3.6e-102100Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

XP_023549438.1 serine/arginine-rich SC35-like splicing factor SCL30 [Cucurbita pepo subsp. pepo]1.2e-10098.99Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD  GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVD--GNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

TrEMBL top hitse value%identityAlignment
A0A1S3CFP8 serine/arginine-rich SC35-like splicing factor SCL302.4e-8890.36Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        +PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRS+YGRSRSRSVSRSRSPRHPSGSRSR+RSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSP RRHADYP SPRGA RERD ERSRQVYSPGYDNAD  + D NGNGYHDK  FEGEDAR NWR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1FWZ5 serine/arginine-rich SC35-like splicing factor SCL302.3e-8690.31Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW
        PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP  PSGS SR+RSRSYSPAPRW
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW

Query:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        RG+YS+SP RRHADYPRSPRGA RERDGERS QVYSPGYDNA G D D  GNGYHDKPAFEGEDARA+WR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1H0N2 serine/arginine-rich SC35-like splicing factor SCL303.9e-10299.49Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSPSRRHADYPRSPRGAARERDGER+RQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1JHD1 serine/arginine-rich SC35-like splicing factor SCL306.0e-8789.8Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW
        PRGFAFVEFVDPYEASEAQYHMNGKKFAGREI VVLAAESRKRPEQMRQRSRRGPS YGGRRSYYGRSRSRSVSRSRSP  PSGS SR+RSRSYSPAPRW
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW

Query:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        RG+YS+SP RRHADYPRSPR   RERDGERSRQVYSPGYDNA   D DGNGNGYHDKPAFEG DARA+WR SP RTSRSPSGSRSRSADASPRHGR
Subjt:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

A0A6J1JIZ1 serine/arginine-rich SC35-like splicing factor SCL301.7e-102100Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
        WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRHGR

SwissProt top hitse value%identityAlignment
Q1PDV2 Serine/arginine-rich SC35-like splicing factor SCL289.1e-0840.58Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR
        +PRGF FV++    +A+EA   MN K   GREIA+V A E+RK P++M  R+  G S   GR   Y R+  RS  R    R+ S SRSR   R  S   +
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPR

Query:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSP
         R D   SP RR     RSP    R     +SR   SP
Subjt:  WRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSP

Q8L3X8 Serine/arginine-rich SC35-like splicing factor SCL301.0e-3857.07Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAP
        QPRGFAFVEFVD Y+A EAQ  MN + FAGREI VV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSR+RSRSYSPAP
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAP

Query:  RWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
        R RG                PRG   E D   SR+ YSPGY+   A  PD D NG N   +KP +E ED R   R      SRSPSGSRSRS + SPR
Subjt:  RWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

Q9BRL6 Serine/arginine-rich splicing factor 83.1e-0838.61Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGG----RRSYYGRSRS-RSVSRSRSPRHPSGSRSRHRSRSYS
        PRGFAFV F D  +A +A+  M+G +  GRE+ V +A   R+   + RQ   RG S  GG     RSY  RSRS R   RSRS R PS SRSR RSR Y 
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGG----RRSYYGRSRS-RSVSRSRSPRHPSGSRSRHRSRSYS

Query:  PAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVY-SPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH
         +   R  YS SP  R + Y RSP   +R R+       Y S GY N+         + YH   +     +  + R +   TS+S S  RS+S+  S   
Subjt:  PAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVY-SPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPRH

Query:  GR
         R
Subjt:  GR

Q9LHP2 Serine/arginine-rich SC35-like splicing factor SCL30A1.2e-1035.5Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPR
        PRGF F++F+DP +A+EA++ M+G    GRE+ VV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPR

Query:  WRGDYSVSPSRRHADYPRS-----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR
             SVSP  R  +  RS     P   +R R G       SPG   +            H +        R N   +P++  S+SP   +SRS    PR
Subjt:  WRGDYSVSPSRRHADYPRS-----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR

Q9SEU4 Serine/arginine-rich SC35-like splicing factor SCL331.2e-1241.33Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW
        PRGF FV+F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS         
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW

Query:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
         GDY   P RRH  +PRS        DG RS    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

Arabidopsis top hitse value%identityAlignment
AT1G55310.1 SC35-like splicing factor 338.8e-1441.33Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW
        PRGF FV+F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS         
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW

Query:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
         GDY   P RRH  +PRS        DG RS    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

AT1G55310.2 SC35-like splicing factor 331.0e-1444.6Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRS-YSPAPR
        PRGF FV+F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R R      GGR     R+  R  SRSRSP  P   RSR RS   YSP PR
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRS-YSPAPR

Query:  WRGDYSVSPSRRHAD----YPRSPRGAARERDGERSRQV
             S+SP     D    Y RSP       DG R R +
Subjt:  WRGDYSVSPSRRHAD----YPRSPRGAARERDGERSRQV

AT1G55310.3 SC35-like splicing factor 334.6e-1541.84Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW
        PRGF FV+F+DP +A++A++HM+G    GRE+ VV A E+RK+P +MR R R G S +  RR    R+  R  SRSRSP  P   RSR RS         
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRW

Query:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
         GDY   P RRH  +PRS        DG RS    SP  D + G     V G        P       R +   SP R SRSPS  R+RS   SPR
Subjt:  RGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADG---PDVDGNGNGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR

AT3G13570.1 SC35-like splicing factor 30A8.2e-1235.5Show/hide
Query:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPR
        PRGF F++F+DP +A+EA++ M+G    GRE+ VV A E+RK+P +MR R R      GGR + +   R      SRSP    G RSR RSR Y SP  +
Subjt:  PRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSY-SPAPR

Query:  WRGDYSVSPSRRHADYPRS-----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR
             SVSP  R  +  RS     P   +R R G       SPG   +            H +        R N   +P++  S+SP   +SRS    PR
Subjt:  WRGDYSVSPSRRHADYPRS-----PRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRPSPDRT-SRSPSGSRSRSADASPR

AT3G55460.1 SC35-like splicing factor 307.1e-4057.07Show/hide
Query:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAP
        QPRGFAFVEFVD Y+A EAQ  MN + FAGREI VV+A+ESRKRPE+MR ++R R     G R   +GRSRSRS+SRSRSPR PS SRSR+RSRSYSPAP
Subjt:  QPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSR-RGPSDYGGRRSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAP

Query:  RWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR
        R RG                PRG   E D   SR+ YSPGY+   A  PD D NG N   +KP +E ED R   R      SRSPSGSRSRS + SPR
Subjt:  RWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDN--ADGPDVDGNG-NGYHDKPAFEGEDARANWRPSPDRTSRSPSGSRSRSADASPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAAGTGTTTGAAGAATTTTCTACTCATGAATTGGTAGTTTCAAGTACTTATATCAAGAAATGTGAATTTGACGAGGAAGAAGTGCTTCATGTGTTCCGAGTATG
TGAAGAATCTTCAACCCATGAATTGTTGATAAGTCAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGA
AGAAATTTGCTGGTAGGGAGATTGCTGTGGTTCTTGCTGCAGAATCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCAGACTATGGTGGACGC
CGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCCCGTCATCCTTCAGGTTCAAGAAGTAGACACCGATCAAGATCCTATTCTCCTGCTCC
AAGATGGCGAGGCGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGATTACCCCAGATCGCCGAGAGGTGCTGCTCGTGAGCGAGATGGTGAGAGGAGTCGACAAGTAT
ATTCTCCAGGTTATGATAATGCTGATGGTCCTGATGTCGATGGAAATGGAAATGGATATCATGACAAGCCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGCCT
TCTCCTGATAGAACATCAAGATCACCTTCGGGGTCTCGATCCCGCTCTGCTGATGCGTCCCCAAGGCATGGTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAAGTGTTTGAAGAATTTTCTACTCATGAATTGGTAGTTTCAAGTACTTATATCAAGAAATGTGAATTTGACGAGGAAGAAGTGCTTCATGTGTTCCGAGTATG
TGAAGAATCTTCAACCCATGAATTGTTGATAAGTCAGCCTCGAGGATTTGCATTTGTGGAGTTTGTTGATCCTTACGAGGCTTCTGAAGCTCAGTACCATATGAATGGGA
AGAAATTTGCTGGTAGGGAGATTGCTGTGGTTCTTGCTGCAGAATCAAGGAAGAGGCCAGAACAGATGCGCCAAAGGAGTAGAAGGGGACCATCAGACTATGGTGGACGC
CGTTCTTATTATGGGCGTTCTAGATCTCGTTCAGTATCCAGATCACGCTCCCCCCGTCATCCTTCAGGTTCAAGAAGTAGACACCGATCAAGATCCTATTCTCCTGCTCC
AAGATGGCGAGGCGACTATTCTGTTTCCCCTAGTAGAAGGCATGCAGATTACCCCAGATCGCCGAGAGGTGCTGCTCGTGAGCGAGATGGTGAGAGGAGTCGACAAGTAT
ATTCTCCAGGTTATGATAATGCTGATGGTCCTGATGTCGATGGAAATGGAAATGGATATCATGACAAGCCTGCATTTGAAGGGGAGGATGCACGAGCTAATTGGAGGCCT
TCTCCTGATAGAACATCAAGATCACCTTCGGGGTCTCGATCCCGCTCTGCTGATGCGTCCCCAAGGCATGGTAGATGATGTGAAACTATGGTTTCTAAAATCTAACATTT
GTTACTCTGAAGTTAGTATCCACTATCCGTTTTAAGATTTGTATTTTTTGTATGATGTTGTTAGCGATCGGATTTTCTAGACAGGCAAATTGGTTTGCTCATATTTGAAG
CTTAAAATTATTATGGTAGACCATCAAACCTCTTGCTACTTTTCTGGATTGTCAATGCTCTTCTTCTTCCTCAGATATCTATCTCATTTAGCATCATCGACGATACAGTG
ACCCTTCTCATTCATCTATTTGGTGGAGAGAATGTGGTTACATTTGACAAGATAGAAATTAAAATGAGCAAGGCCTCTCTGTTTCTGTTTCTGCTTCTGTTTGAAGTAAG
AGATGTTTTCAT
Protein sequenceShow/hide protein sequence
MFQVFEEFSTHELVVSSTYIKKCEFDEEEVLHVFRVCEESSTHELLISQPRGFAFVEFVDPYEASEAQYHMNGKKFAGREIAVVLAAESRKRPEQMRQRSRRGPSDYGGR
RSYYGRSRSRSVSRSRSPRHPSGSRSRHRSRSYSPAPRWRGDYSVSPSRRHADYPRSPRGAARERDGERSRQVYSPGYDNADGPDVDGNGNGYHDKPAFEGEDARANWRP
SPDRTSRSPSGSRSRSADASPRHGR