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CmaCh04G012170 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G012170
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUbiquitin conjugation factor E4
Genome locationCma_Chr04:6207524..6207909
RNA-Seq ExpressionCmaCh04G012170
SyntenyCmaCh04G012170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7803805.1 Mitochondrial chaperone BCS1 [Senna tora]3.4e-0669.57Show/hide
Query:  KEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWL
        ++  SKNRR+PL AA+TRYSLVKGERIVRSV TA+LRA + IS  L
Subjt:  KEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWL
KAF7833781.1 Mitochondrial chaperone BCS1 [Senna tora]1.4e-0471.43Show/hide
Query:  PNPKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAF
        P  K    KNRR+PL AA+TRYSLVKGERIVRSV  A LRAF
Subjt:  PNPKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAF
KHG26645.1 Violaxanthin de-epoxidase, chloroplastic [Gossypium arboreum]5.5e-0462Show/hide
Query:  EGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAG
        E PSKNRR+PL AA+TRYSLVKGERIVR V  A+L  F      L  G+G
Subjt:  EGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAG
RDX80162.1 hypothetical protein CR513_39320, partial [Mucuna pruriens]9.3e-0452.54Show/hide
Query:  TGPN-PKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAGWI
        T P+ P    SKNRR+ L+   TRYSLVKGERIVRSVF  QLRA ++     ++   WI
Subjt:  TGPN-PKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAGWI
TrEMBL top hitse value%identityAlignment
A0A0B0PNT1 Violaxanthin de-epoxidase, chloroplastic2.7e-0462Show/hide
Query:  EGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAG
        E PSKNRR+PL AA+TRYSLVKGERIVR V  A+L  F      L  G+G
Subjt:  EGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAG
A0A200R9Y3 Ubiquitin conjugation factor E45.9e-0481.82Show/hide
Query:  RRIPLWAANTRYSLVKGERIVRSVFTAQLRAFR
        RR+PL AA+TRYSLVKGERIVRSV TA LRAF+
Subjt:  RRIPLWAANTRYSLVKGERIVRSVFTAQLRAFR
A0A371FPI7 Uncharacterized protein (Fragment)4.5e-0452.54Show/hide
Query:  TGPN-PKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAGWI
        T P+ P    SKNRR+ L+   TRYSLVKGERIVRSVF  QLRA ++     ++   WI
Subjt:  TGPN-PKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAGWI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATATTAACTGGACCCAACCCAAAGGAAGGACCCTCCAAAAATAGGCGTATACCGCTTTGGGCGGCGAACACACGGTATTCTTTAGTAAAAGGCGAAAGAATA
GTTCGCTCTGTGTTCACCGCACAGCTCCGTGCCTTCAGAAAGATATCTCATTGGCTTTATATAGGCGCTGGATGGATCCACTCAGCGACCTTTTTTCGATGTGGG
CTTTCCAATTTTATTTTGCTGTACCATGTACCAATGAGAAATAGCCACGTCGGATCCCATTCAACAATAGTCTATCAGATTATTCAACTTCCTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGATATTAACTGGACCCAACCCAAAGGAAGGACCCTCCAAAAATAGGCGTATACCGCTTTGGGCGGCGAACACACGGTATTCTTTAGTAAAAGGCGAAAGAATA
GTTCGCTCTGTGTTCACCGCACAGCTCCGTGCCTTCAGAAAGATATCTCATTGGCTTTATATAGGCGCTGGATGGATCCACTCAGCGACCTTTTTTCGATGTGGG
CTTTCCAATTTTATTTTGCTGTACCATGTACCAATGAGAAATAGCCACGTCGGATCCCATTCAACAATAGTCTATCAGATTATTCAACTTCCTTTATAA
Protein sequenceShow/hide protein sequence
MILTGPNPKEGPSKNRRIPLWAANTRYSLVKGERIVRSVFTAQLRAFRKISHWLYIGAGWIHSATFFRCGLSNFILLYHVPMRNSHVGSHSTIVYQIIQLPL