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CmaCh04G012330 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G012330
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionTBC1 domain family member 2A isoform X2
Genome locationCma_Chr04:6302782..6304616
RNA-Seq ExpressionCmaCh04G012330
SyntenyCmaCh04G012330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601037.1 TBC1 domain family member 9, partial [Cucurbita argyrosperma subsp. sororia]3.1e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
KAG7031847.1 MDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
XP_022956945.1 ecotropic viral integration site 5 protein homolog isoform X1 [Cucurbita moschata]3.1e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
XP_022977357.1 TBC1 domain family member 2A isoform X1 [Cucurbita maxima]3.1e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
XP_022977365.1 TBC1 domain family member 2A isoform X2 [Cucurbita maxima]3.1e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
TrEMBL top hitse value%identityAlignment
A0A6J1FQK1 TBC1 domain family member 8B-like2.3e-0475Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSN+ED  PNDGSKTTEEET+IQKKT EEE+ N GV++
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
A0A6J1GXW1 ecotropic viral integration site 5 protein homolog isoform X21.5e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
A0A6J1GZ56 ecotropic viral integration site 5 protein homolog isoform X11.5e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
A0A6J1II82 TBC1 domain family member 2A isoform X11.5e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
A0A6J1IM42 TBC1 domain family member 2A isoform X21.5e-11100Show/hide
Query:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
        GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
Subjt:  GKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCCTCCACTCTGTCTTACACATCCGTTCATGTTAAGACTGAGGCTTTACGAGCCTGCTGCGGGAACTTCAGCATAGGAACTGGAAAACCATCCAATGTTGAGGA
CCCAAATCCAAATGATGGTAGCAAGACTACCGAAGAGGAAACTTCAATCCAGAAAAAAACTCCTGAAGAAGAGTCGCCAAATTCAGGCGTTGATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCCTCCACTCTGTCTTACACATCCGTTCATGTTAAGACTGAGGCTTTACGAGCCTGCTGCGGGAACTTCAGCATAGGAACTGGAAAACCATCCAATGTTGAGGA
CCCAAATCCAAATGATGGTAGCAAGACTACCGAAGAGGAAACTTCAATCCAGAAAAAAACTCCTGAAGAAGAGTCGCCAAATTCAGGCGTTGATCAGTAACACATTAACG
GCCTCCATGACGAGTAAAACTCCATCTCAAAAATGGTACTCGTATCTATACATTACAAATTGCAGTACACCATCATTTTGGAGTTGCATTTCCTGTATCTATATACCACT
CCCAACAATAGTTTTAAAGATATATTTATCTTTTCTCTATCAGCATAGAAATATATAATATATATAGATACCAGGTAGAACCAATTTTTTGGTTGATTCTTTGTTTGTTT
GGTTAAATTACAGGATAATAATTGTAAAATCTTTGTATTTACAAAAAATCTTGTCATGCCATCATCCTTTCTAAGTACGGTTCCCATTAGGCCCTCATAAAGACTTGAAA
AAACTTCCTAATCCTAACAGATTGCATTTCAAAATAACAGGTAAGAGAAGTTGGGAACATAGATTGTCCACAAAACCGGTAGGCTCTTAGCCCTGTTTCTGTGTCTTTAT
AATGCTGTTGTTATTCAATTTTCCATAAATGCTTGCTCTGTTGTCCATGTACTTTTTGACTTTACATATTTAATTCTCCCTCTCATAATTCAAAGCCCAGAGGCTGACCA
TGAAATTAGGTGGAGTTCCAATTGGCTACCACGTGTCAGCTTACTGTAATTGGTTGGTGACCAAGAACATGTTAAGGACACTGTTTGTTGCCATTTGCAGCTTCTGGCCA
ATAAATATTAGATACAACCTTGAGTAAGGCCATTTCTAGTAGAACAGTAAATGGCTTGGAAATGTATTTATAATGTATTTAATCCGTTTTAAGATATGCATTCAAAATGT
AAAAATGATTAATCGC
Protein sequenceShow/hide protein sequence
MKSSTLSYTSVHVKTEALRACCGNFSIGTGKPSNVEDPNPNDGSKTTEEETSIQKKTPEEESPNSGVDQ