; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G012400 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G012400
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationCma_Chr04:6356430..6358184
RNA-Seq ExpressionCmaCh04G012400
SyntenyCmaCh04G012400
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022957205.1 probable RNA-binding protein ARP1 isoform X5 [Cucurbita moschata]5.0e-13698.79Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFA VPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

XP_022999423.1 probable RNA-binding protein ARP1 isoform X3 [Cucurbita maxima]1.5e-135100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP

XP_022999430.1 probable RNA-binding protein ARP1 isoform X4 [Cucurbita maxima]6.3e-139100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

XP_022999439.1 probable RNA-binding protein ARP1 isoform X5 [Cucurbita maxima]5.9e-13799.6Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNH KVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

XP_023532900.1 probable RNA-binding protein ARP1 isoform X2 [Cucurbita pepo subsp. pepo]2.0e-13799.19Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTT TKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAA PFAAVPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

TrEMBL top hitse value%identityAlignment
A0A6J1GZW6 probable RNA-binding protein ARP1 isoform X52.4e-13698.79Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFK+AESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSP TYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFA VPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

A0A6J1KCZ0 probable RNA-binding protein ARP1 isoform X27.1e-136100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP

A0A6J1KFD3 probable RNA-binding protein ARP1 isoform X43.1e-139100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

A0A6J1KFF3 probable RNA-binding protein ARP1 isoform X67.1e-136100Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNP

A0A6J1KH37 probable RNA-binding protein ARP1 isoform X52.9e-13799.6Show/hide
Query:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
        MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ
Subjt:  MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQ

Query:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
        GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNH KVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH
Subjt:  GPQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYH

Query:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
        QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE
Subjt:  QSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGPNPVCLVVE

SwissProt top hitse value%identityAlignment
D3Z4I3 RNA-binding protein 243.5e-2360Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q5ZJX4 RNA-binding protein 382.0e-2359.09Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSS
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+  S
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSS

Q6P8A7 RNA-binding protein 242.7e-2360Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9I8B3 RNA-binding protein 24-B2.7e-2360Show/hide
Query:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR
        DTT TK+FVGGL + T   ++R +FE FGDI EAV+ITD+ TG+S+GYGFVT  D  +A++AC+D  PII+GR+AN NLA LGA+
Subjt:  DTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR

Q9M1S3 Probable RNA-binding protein ARP12.3e-5953.97Show/hide
Query:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG
        FGDT LTKVFVGGLAW+T KEAM DHF K+GDILEAVII+DKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        +P QG
Subjt:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG

Query:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNG----GPYAQIYP-----------------
        P+ G+     R T    GNH QWYYP+G        Q HQAVPFYGY   P+ Y+A ++++N QKVGY+ G    G YAQ+ P                 
Subjt:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNG----GPYAQIYP-----------------

Query:  -GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIFPPSPTAAGPFA-AVPPTS
         G+ MVG A+ ++P Y VY YHQSQA+G       P P+ + P + + PP S
Subjt:  -GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIFPPSPTAAGPFA-AVPPTS

Arabidopsis top hitse value%identityAlignment
AT1G22910.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-3741.77Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+ITDK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +RS        P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP

Query:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV
          G  G         +     +  P    P  F H PH  +  +GYSP    Y +   +  +   G  +GG Y  +Y       G     A +  P YP 
Subjt:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV

Query:  YHYHQSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSK
           H       P   F    ++  P    PPT  M +
Subjt:  YHYHQSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSK

AT1G22910.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-3741.56Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+ITDK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +RS        P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP

Query:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV
          G  G         +     +  P    P  F H PH  +  +GYSP    Y +   +  +   G  +GG Y  +Y       G     A +  P YP 
Subjt:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV

Query:  YHYHQSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGP
           H       P   F    ++  P    PPT  M +   V P
Subjt:  YHYHQSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSKPASVGP

AT1G22910.3 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-3741.77Show/hide
Query:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP
        GDTT TKVFVGGLAWET KE M+ HFE+FG+ILEAV+ITDK +GRSKGYGFVTF++AE+A+ AC D+ P+I+GRRANCNLASLG +RS        P  P
Subjt:  GDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGP

Query:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV
          G  G         +     +  P    P  F H PH  +  +GYSP    Y +   +  +   G  +GG Y  +Y       G     A +  P YP 
Subjt:  QPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIY------PGQAMVGANTLMPMYPV

Query:  YHYHQSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSK
           H       P   F    ++  P    PPT  M +
Subjt:  YHYHQSQAMGMPAHIFPPSPTAAGPFAAVPPTSIMSK

AT3G54770.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-6053.97Show/hide
Query:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG
        FGDT LTKVFVGGLAW+T KEAM DHF K+GDILEAVII+DKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R        +P QG
Subjt:  FGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQG

Query:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNG----GPYAQIYP-----------------
        P+ G+     R T    GNH QWYYP+G        Q HQAVPFYGY   P+ Y+A ++++N QKVGY+ G    G YAQ+ P                 
Subjt:  PQPGSNGGAPRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNG----GPYAQIYP-----------------

Query:  -GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIFPPSPTAAGPFA-AVPPTS
         G+ MVG A+ ++P Y VY YHQSQA+G       P P+ + P + + PP S
Subjt:  -GQAMVG-ANTLMPMYPVYHYHQSQAMGMPAHIFPPSPTAAGPFA-AVPPTS

AT3G54770.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-4549.78Show/hide
Query:  MRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR-RSSRSASATPPQGPQPGSNGGAPRTTSAAAGNHV
        M DHF K+GDILEAVII+DKLT RSKGYGFVTFKDA++A +ACEDS PIINGRRANCNLASLG R R      ATPP                   GNH 
Subjt:  MRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGAR-RSSRSASATPPQGPQPGSNGGAPRTTSAAAGNHV

Query:  QWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNG----GPYAQIYP------------------GQAMVG-ANTLMPMYPVYHY
        QWYYP+G        Q HQAVPFYGY   P+ Y+A ++++N QKVGY+ G    G YAQ+ P                  G+ MVG A+ ++P Y VY Y
Subjt:  QWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNG----GPYAQIYP------------------GQAMVG-ANTLMPMYPVYHY

Query:  HQSQAMGMPAHIFPPSPTAAGPFA-AVPPTS
        HQSQA+G       P P+ + P + + PP S
Subjt:  HQSQAMGMPAHIFPPSPTAAGPFA-AVPPTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGGATACCACTTTGACCAAGGTGTTCGTTGGGGGCTTGGCTTGGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGTGACATTCTCGAGGC
GGTTATCATCACCGATAAACTCACCGGCAGATCCAAGGGCTACGGATTCGTCACGTTCAAGGACGCAGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCA
ATGGCCGTCGAGCCAACTGTAATCTGGCTTCCCTTGGCGCTCGGAGATCCTCAAGGTCGGCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCGAACGGTGGTGCG
CCGAGGACGACGTCAGCGGCTGCGGGAAACCACGTGCAGTGGTACTACCCAGCGGGGACTCATCCGACGGCGTTTCATCATCAGCCTCATCAGGCCGTCCCTTTCTATGG
ATACTCCCCGAGCCCCACCACCTACATCGCCACCGATATCAGTTACAACCATCAGAAGGTGGGGTATATGAACGGCGGGCCTTACGCGCAGATATATCCGGGGCAGGCCA
TGGTAGGGGCGAACACCTTGATGCCGATGTACCCGGTGTATCATTACCATCAATCACAGGCGATGGGGATGCCGGCACACATATTCCCGCCAAGTCCGACGGCGGCTGGG
CCATTTGCGGCGGTTCCACCCACTTCCATTATGTCCAAACCGGCATCCGTTGGCCCCAACCCAGTTTGCTTGGTTGTGGAATAA
mRNA sequenceShow/hide mRNA sequence
GCAATTGCCTATCTGTCAGCCTCTCTGTCTCTCTGTCTTCTTCCATTTCTTTATTTCCATACCACTCTGTTCTTCTCCCTTCTCCCTTCTCCCTTCTTATATAACCTTCT
TCTTCTCTTCCCCACCACCATTTTCTCCCTCCTTCGCTTAATCACCACGCATTCTTCAGCCATGTTTGGGGATACCACTTTGACCAAGGTGTTCGTTGGGGGCTTGGCTT
GGGAGACTCCCAAGGAAGCCATGAGAGATCACTTCGAGAAGTTCGGTGACATTCTCGAGGCGGTTATCATCACCGATAAACTCACCGGCAGATCCAAGGGCTACGGATTC
GTCACGTTCAAGGACGCAGAATCGGCGAAGAAGGCTTGTGAGGATTCGGCTCCGATCATCAATGGCCGTCGAGCCAACTGTAATCTGGCTTCCCTTGGCGCTCGGAGATC
CTCAAGGTCGGCTTCGGCTACTCCTCCGCAAGGTCCTCAACCAGGATCGAACGGTGGTGCGCCGAGGACGACGTCAGCGGCTGCGGGAAACCACGTGCAGTGGTACTACC
CAGCGGGGACTCATCCGACGGCGTTTCATCATCAGCCTCATCAGGCCGTCCCTTTCTATGGATACTCCCCGAGCCCCACCACCTACATCGCCACCGATATCAGTTACAAC
CATCAGAAGGTGGGGTATATGAACGGCGGGCCTTACGCGCAGATATATCCGGGGCAGGCCATGGTAGGGGCGAACACCTTGATGCCGATGTACCCGGTGTATCATTACCA
TCAATCACAGGCGATGGGGATGCCGGCACACATATTCCCGCCAAGTCCGACGGCGGCTGGGCCATTTGCGGCGGTTCCACCCACTTCCATTATGTCCAAACCGGCATCCG
TTGGCCCCAACCCAGTTTGCTTGGTTGTGGAATAA
Protein sequenceShow/hide protein sequence
MFGDTTLTKVFVGGLAWETPKEAMRDHFEKFGDILEAVIITDKLTGRSKGYGFVTFKDAESAKKACEDSAPIINGRRANCNLASLGARRSSRSASATPPQGPQPGSNGGA
PRTTSAAAGNHVQWYYPAGTHPTAFHHQPHQAVPFYGYSPSPTTYIATDISYNHQKVGYMNGGPYAQIYPGQAMVGANTLMPMYPVYHYHQSQAMGMPAHIFPPSPTAAG
PFAAVPPTSIMSKPASVGPNPVCLVVE