CuGenDBv2

Gene ID	CmaCh04G013110
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	F-box protein At2g35280-like
Genome location	Cma_Chr04:6665235..6666300
RNA-Seq Expression	CmaCh04G013110
Synteny	CmaCh04G013110
Gene Ontology terms	NA
InterPro domains	IPR040338 - Putative F-box protein At1g67623-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022990439.1 uncharacterized protein LOC111487294 [Cucurbita maxima]

1.0e-94

98.21

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH
        EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDI+  H
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH

XP_023549398.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]

5.3e-75

83.03

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LY+KGMLEFFTH REASG+ YLKL AQKGY ETCYVY IILYA SLEDEGVKFLKICEAKLG K AECRRRVKEFV  LWVKN I L 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII
        EKD  D+R CESVVKN CKKNVRRI WDGND DDYY EHTCEACKWNEEV RFCNMLRTGSYD++
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII

XP_023549459.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]

5.3e-75

83.03

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LY+KGMLEFFTH REASG+ YLKL AQKGY ETCYVY IILYA SLEDEGVKFLKICEAKLG K AECRRRVKEFV  LWVKN I L 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII
        EKD  D+R CESVVKN CKKNVRRI WDGND DDYY EHTCEACKWNEEV RFCNMLRTGSYD++
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII

XP_023549492.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]

6.9e-75

80.95

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LYRKGMLEFFTH REASGMTYLKL AQKGY + CYVY IILY TS+EDEGVKFLKICEAKLG K  ECRRRVKEFV  LWVKN I + 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH
        +KD  DRR CESV+KN CKKNVRRI WD ND DDYYGEHTCEACKWN EVLRFCNMLRTGSYDI+  H
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH

XP_023549584.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]

6.9e-75

83.03

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LY KGMLEFFTH REASGM YLKL AQKGY E CYVY IILYA SLEDEGVKFLKICEAKLG K AECRRRVKEFV  LWVKN I L 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII
        EKD  D+R CESVVKN CKKNVRRI WDGND DDYYGEH CEACKWNEEV RFCNMLRTGSYD++
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GYN4 putative F-box protein At1g67623

7.7e-72

79.39

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LYRKGMLEFFTH REASGM YLKL AQKGY + CYVY IILYA S+EDEGVKFLKICEAKLG K A+CR RVKEF+  LWVKN I + 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII
        E D  DRR CESV+KN CKKNVRR  WD ND DDYYGEHTCEACKWN EVLRFCNMLRTGSYDI+
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII

A0A6J1H022 putative F-box protein At1g67623

3.7e-74

81.82

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LY+KGMLEFFT+ REASGM YLKL AQKGYSE CYVY IILY  S EDEGVKFLKICEAKLG K AECRRRVKE V  LWVKN I LS
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII
        +KD  D+R CESVVKN CKKNVRRI WDGND DDYYGEHTCEACKWNEEV RFCNMLRTGSYD++
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDII

A0A6J1JRV1 putative F-box protein At1g67623

2.2e-74

80.36

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LYRKGMLEFFTH REASGMTYLK+ AQKGYSE CYVY IILYATS+EDEGVKFLKICE KLG K AECRRRVKEFV +LWVKN I + 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH
        EK   DRR CE+V+KN CKKNVRRI WD ND D+YYGE+TCEACKWN EVLRFCNMLRTGSYDI+  H
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH

A0A6J1JRX4 putative F-box protein At1g67623

2.2e-74

80.36

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        ME CNNNGNPE LYRKGMLEFFTH REASGMTYLK+ AQKGYSE CYVY IILYATS+EDEGVKFLKICE KLG K AECRRRVKEFV +LWVKN I + 
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH
        EK   DRR CE+V+KN CKKNVRRI WD ND D+YYGE+TCEACKWN EVLRFCNMLRTGSYDI+  H
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH

A0A6J1JS19 uncharacterized protein LOC111487294

4.9e-95

98.21

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
        MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLS

Query:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH
        EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDI+  H
Subjt:  EKDFGDRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTH

SwissProt top hits

e value

%identity

Alignment

Q9FXC7 Putative F-box protein At1g67623

3.0e-04

39.62

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIIL
        +E C  + NPE L++KG + +F    +  G+ YL   A+KG  E  YVY +IL
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIIL

Arabidopsis top hits

e value

%identity

Alignment

AT1G67623.1 F-box family protein

2.1e-05

39.62

Show/hide

Query:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIIL
        +E C  + NPE L++KG + +F    +  G+ YL   A+KG  E  YVY +IL
Subjt:  MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIIL

AT1G74875.1 FUNCTIONS IN: molecular_function unknown

1.0e-04

25.61

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Query:  CNNNGNPEILYRKGMLEFF---THYREAS-GMTYLKLYAQKGYSETCYVYDIILYAT--SLEDEGVKFLKICEAKLGLKRA-ECRRRVKEFVCNLWVKNN
        C  +GN E +YRKG++++F   +H R+   G+ ++   A  G  E  YVY +IL       +  G K L      L L    +   + +  + N+W    
Subjt:  CNNNGNPEILYRKGMLEFF---THYREAS-GMTYLKLYAQKGYSETCYVYDIILYAT--SLEDEGVKFLKICEAKLGLKRA-ECRRRVKEFVCNLWVKNN

Query:  IPLSEKDFGDRRECESVVKNTCKKNVRR-------IRWDGNDGDDYYGEHTCEACKWNEEVLRF
         P+       R   +S V+  C  + R         R    + DD      CE C  + EV  F
Subjt:  IPLSEKDFGDRRECESVVKNTCKKNVRR-------IRWDGNDGDDYYGEHTCEACKWNEEVLRF

Sequences

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CDS sequence

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ATGGAAAGCTGCAACAACAACGGAAACCCAGAGATTCTATACCGAAAGGGAATGCTGGAATTCTTCACCCATTATAGAGAAGCTTCTGGAATGACATATTTAAAG
CTTTATGCCCAAAAAGGCTACTCGGAAACTTGTTATGTATACGACATCATTTTGTATGCAACGAGTTTGGAGGATGAGGGAGTGAAGTTCTTGAAGATTTGTGAG
GCAAAATTAGGGCTTAAACGGGCTGAATGTCGTCGGAGAGTTAAGGAATTTGTTTGTAATCTTTGGGTTAAGAACAATATTCCTTTGTCGGAAAAGGATTTCGGT
GACCGGAGGGAATGTGAGAGTGTAGTTAAGAATACTTGTAAGAAGAACGTGAGAAGAATTAGATGGGATGGGAACGATGGGGATGATTATTATGGAGAACACACG
TGCGAAGCGTGTAAATGGAATGAGGAAGTTTTGAGATTTTGTAATATGCTTAGAACTGGGAGTTACGATATCATCCCCACGCACCGAACCACAACAAGAAACCAG
GCGAAAGCATCAGAAGTTGACGCCTCTCCAGACAAGGCGACCACCACTCGAAGAAGCCAAAATTCTCTTTCCGCTACTTTCTGA

mRNA sequence

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Protein sequence

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MESCNNNGNPEILYRKGMLEFFTHYREASGMTYLKLYAQKGYSETCYVYDIILYATSLEDEGVKFLKICEAKLGLKRAECRRRVKEFVCNLWVKNNIPLSEKDFG
DRRECESVVKNTCKKNVRRIRWDGNDGDDYYGEHTCEACKWNEEVLRFCNMLRTGSYDIIPTHRTTTRNQAKASEVDASPDKATTTRRSQNSLSATF

CmaCh04G013110 (gene) of Cucurbita maxima (Rimu) v1.1 genome