CuGenDBv2

Gene ID	CmaCh04G013530
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	ATP synthase subunit d, mitochondrial
Genome location	Cma_Chr04:6902110..6904425
RNA-Seq Expression	CmaCh04G013530
Synteny	CmaCh04G013530
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0000274 - mitochondrial proton-transporting ATP synthase, stator stalk (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR008689 - ATP synthase, F0 complex, subunit D, mitochondrial IPR036228 - ATP synthase, F0 complex, subunit D superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022945159.1 ATP synthase subunit d, mitochondrial [Cucurbita moschata]

8.3e-82

94.64

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKV D AFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIG RLV++YKEAYDS+E+PKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAE KSLKESERLEKEIVEVQELKKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

XP_022956748.1 ATP synthase subunit d, mitochondrial-like [Cucurbita moschata]

8.8e-84

96.43

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKVADA FKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLV++YKEAYDS+EIPKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

XP_022966719.1 ATP synthase subunit d, mitochondrial [Cucurbita maxima]

4.1e-81

93.45

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKV D AFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIG RLV++YKEAYDS+E+PKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEIVEVQELKKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

XP_022974559.1 ATP synthase subunit d, mitochondrial-like [Cucurbita maxima]

3.2e-86

100

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

XP_023514325.1 ATP synthase subunit d, mitochondrial-like [Cucurbita pepo subsp. pepo]

3.4e-83

95.24

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKV+DA FKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLV++YKEAYDS+EIPKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEEKSLKESERLEKEIVEVQE+KKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

TrEMBL top hits

e value

%identity

Alignment

A0A5D3CDC0 ATP synthase subunit d, mitochondrial

1.7e-80

92.26

Show/hide

Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKV D AFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIG RLV++YKEAYDS+EIPKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAEEKSLKESERLEKEI EV+E+K+KI TMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1G072 ATP synthase subunit d, mitochondrial

4.0e-82

94.64

Show/hide

Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKV D AFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIG RLV++YKEAYDS+E+PKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAE KSLKESERLEKEIVEVQELKKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1GY12 ATP synthase subunit d, mitochondrial

4.3e-84

96.43

Show/hide

Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKVADA FKASKNIDWDGMAKLLVSDEARKEFS+LRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLV++YKEAYDS+EIPKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1HUL8 ATP synthase subunit d, mitochondrial

2.0e-81

93.45

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKV D AFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNS+LQTKFSQEPEPIDWEYYRKGIG RLV++YKEAYDS+E+PKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE KSLKESERLEKEIVEVQELKKKISTMTA+EYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

A0A6J1IHY9 ATP synthase subunit d, mitochondrial

1.6e-86

100

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Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

SwissProt top hits

e value

%identity

Alignment

Q9FT52 ATP synthase subunit d, mitochondrial

1.1e-73

80.36

Show/hide

Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSG  KK+AD AFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG  +V+ YKEAYDS+EIPK+VD VTP+YK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE+KSLKESERLEKEI +VQE+ KK+STMTA+EYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

Arabidopsis top hits

e value

%identity

Alignment

AT3G52300.1 ATP synthase D chain, mitochondrial

8.0e-75

80.36

Show/hide

Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSG  KK+AD AFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG  +V+ YKEAYDS+EIPK+VD VTP+YK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY
        PKFD+LLVELKEAE+KSLKESERLEKEI +VQE+ KK+STMTA+EYFEKHPEL+KKFDDEIRND WGY
Subjt:  PKFDSLLVELKEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

AT3G52300.2 ATP synthase D chain, mitochondrial

3.0e-45

75.93

Show/hide

Query:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK
        MSG  KK+AD AFKAS+ IDWDGMAK+LV+DEAR+EFS+LRRAF+EVN+ LQTKFSQEPEPIDW+YYRKGIG  +V+ YKEAYDS+EIPK+VD VTP+YK
Subjt:  MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYK

Query:  PKFDSLLV
        PKFD+L++
Subjt:  PKFDSLLV

Sequences

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CDS sequence

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ATGAGCGGCACCGTTAAGAAAGTGGCCGATGCTGCCTTCAAAGCATCCAAGAATATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGTAAGGAGTT
CTCTAGCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAGCCCTCCAGACTAAATTTAGCCAGGAACCGGAGCCCATAGACTGGGAATATTACAGAAAGGGAATCGGACCCC
GCCTGGTCAACATATACAAAGAGGCTTATGACAGCGTCGAGATCCCCAAGTTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTCGATTCATTGCTGGTAGAATTG
AAGGAAGCTGAAGAAAAATCCCTGAAGGAGTCTGAGAGGTTGGAGAAGGAGATTGTCGAAGTTCAAGAATTGAAGAAAAAGATCAGCACCATGACTGCTAATGAATACTT
TGAGAAGCATCCTGAGCTGAGGAAGAAATTCGATGATGAAATCCGAAATGATTACTGGGGCTATTGA

mRNA sequence

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TGAGCGCACAACGAATTGCCCTCTCTCACAGTTCCCATTGATTTTCGGTTTTCACTGCCAAATCCAGAGAAAATGAGCGGCACCGTTAAGAAAGTGGCCGATGCTGCCTT
CAAAGCATCCAAGAATATCGATTGGGATGGCATGGCCAAGCTTTTGGTCTCCGATGAGGCTCGTAAGGAGTTCTCTAGCCTTCGCCGAGCCTTCGAGGAGGTTAACTCAG
CCCTCCAGACTAAATTTAGCCAGGAACCGGAGCCCATAGACTGGGAATATTACAGAAAGGGAATCGGACCCCGCCTGGTCAACATATACAAAGAGGCTTATGACAGCGTC
GAGATCCCCAAGTTTGTAGACACAGTGACTCCGCAGTACAAACCTAAATTCGATTCATTGCTGGTAGAATTGAAGGAAGCTGAAGAAAAATCCCTGAAGGAGTCTGAGAG
GTTGGAGAAGGAGATTGTCGAAGTTCAAGAATTGAAGAAAAAGATCAGCACCATGACTGCTAATGAATACTTTGAGAAGCATCCTGAGCTGAGGAAGAAATTCGATGATG
AAATCCGAAATGATTACTGGGGCTATTGACTGGAAAATTACAGTTGAACCGCCAAAGTTTCAGAATTTAATTTCATAAACCTTCCGGAACTTGTTTTGCTGCAGATGTTT
GGTCAGTAATAAAACAAACCAGATAGGTCCTCTGCAATTTGGTTGCATTTCCTTATGGTGACGAAATTGATTAGAGAACACAAGTTTTTCCTCGAAATGATATTGTCAGA
GTTCCAATTAACTCTGAGGTACATTTTTTAATGAGATTGTTATCTTTATTATCGTTTTGAAAATCGATAAGTAGATGTGCAGAGCCTTGAATTCACGAATATAACTATTT
GGTTATTACAA

Protein sequence

Show/hide protein sequence

MSGTVKKVADAAFKASKNIDWDGMAKLLVSDEARKEFSSLRRAFEEVNSALQTKFSQEPEPIDWEYYRKGIGPRLVNIYKEAYDSVEIPKFVDTVTPQYKPKFDSLLVEL
KEAEEKSLKESERLEKEIVEVQELKKKISTMTANEYFEKHPELRKKFDDEIRNDYWGY

CmaCh04G013530 (gene) of Cucurbita maxima (Rimu) v1.1 genome