; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G013580 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G013580
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptiontetraspanin-6
Genome locationCma_Chr04:6938204..6940224
RNA-Seq ExpressionCmaCh04G013580
SyntenyCmaCh04G013580
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR018499 - Tetraspanin/Peripherin
IPR044991 - Tetraspani, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601153.1 Tetraspanin-6, partial [Cucurbita argyrosperma subsp. sororia]4.9e-16799.3Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_022957333.1 tetraspanin-6 [Cucurbita moschata]6.4e-16798.95Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_022991334.1 tetraspanin-6 [Cucurbita maxima]5.8e-168100Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_023544308.1 tetraspanin-6 [Cucurbita pepo subsp. pepo]2.4e-16698.96Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMA--AGAVVAQDPDCYRWNNA
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMA  AGAVVAQDPDCYRWNNA
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMA--AGAVVAQDPDCYRWNNA

Query:  PNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        PNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  PNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

XP_038891767.1 tetraspanin-6 [Benincasa hispida]1.8e-16195.8Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        G+EAPGGRVYREYHLEQYS WLRKR+KDPRYW+TIRSC+LGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMM   A+VAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVY +GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDK+EQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

TrEMBL top hitse value%identityAlignment
A0A0A0KTM6 Uncharacterized protein1.4e-15993.01Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGF+VT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYS WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAAGA+V+QDPDCYRWNNAP 
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY +GCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDK+EQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A1S3BFM9 tetraspanin-66.2e-16093.36Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNT+IGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGF+VT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYS WLRKR+KDPRYW+TIRSC+LGSKTCA+LASWTPLDYL+RDM+PIQSGCCKPPTACNYDMMAAGA+V+QDPDCYRWNNAP 
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLE+VRRDWHKLSVLNVVVV+LLIGVY +GCCAFRNTKRAETDYPYGHN+MTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A6J1CB91 tetraspanin-6-like isoform X29.3e-15691.96Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNV WALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLE+YS WLR R+KDPRYW+TIRSC+LGS+TCAKLASWTPLDYLERDMTPIQSGCCKPPTACNY+     A+ AQDPDCYRWNNA N
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        +LCYEC+SCKAGVLE VRRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAE+DYPYGHNRMTKVRPRWDYYWWRWLHDK+EQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A6J1GZW8 tetraspanin-63.1e-16798.95Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVML LIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLED+RRDWHKLSVLNVVVVVLLIGVYS+GCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

A0A6J1JUI8 tetraspanin-62.8e-168100Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY

SwissProt top hitse value%identityAlignment
Q84WF6 Tetraspanin-52.6e-10260.64Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG +GAC +VAW LWVYL  M+F+I  LMGLT+FGF+VT   G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GV    GRVY+E+ LE Y  WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+      V+ QDPDCYRWNNA  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK
        +LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VY +GCCAF+N KR +   +PYG   M+K RP W+  W RW H +
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK

Q8S8Q6 Tetraspanin-82.2e-6144.15Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPG
        M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG IG+C  V W LWVYL VM  LI  +  +T+F FVVT  G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPG

Query:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D
         G EA  G+ Y+EY L  YS WL+KRV++ + W  IRSC++ SK C+KL +     P++ + +  +T +QSGCCKP   C ++ +              +
Subjt:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D

Query:  PDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAET
        PDC  W+NA   LC++C SCKAG+L++V+  W K++++N+V +V LI VYS+GCCAFRN KR ++
Subjt:  PDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAET

Q9C7C1 Tetraspanin-66.1e-12070.73Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGFIGACFNVAWALWVYLVVM+FLIATLMGLT+FG VVT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVE P GR+Y+EY L  Y  WLR+RV+DP YW +IRSC+L SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+      VV    DC+RWNN   
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        +LCYECD+CKAGVLE++R DW KLSV+N++V+VLLI VY+ GCCAF NT+ A   Y P   NRMT+VRPRWDYYWWRW H+K+EQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY

Q9LSS4 Tetraspanin-45.6e-6544.6Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG  GAC+   + +W+YL  M F+IA L+G TIF +VVT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ
        G      R Y +Y+L  YSGWL+ RV D  YW  I SCV  S  C K+         T   +  R+++P++SGCCKPPT C Y        +  G +V  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKV
        +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N+VVV++L+  Y I C A++N KR   D P G  RMT +
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKV

Q9M1E7 Tetraspanin-32.1e-6444.29Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF GAC+   + +W+YLVVML +IA L+G  IF + VT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ
        G      R Y +Y+LE YSGWL+ RV D  YW  I SC+  S  C K+         T   +  R ++P++SGCCKPPT C +  +        G ++  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRP
        + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+N+VV+++L+  Y I   A+RN KR + D P G  RMTK  P
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRP

Arabidopsis top hitse value%identityAlignment
AT2G23810.1 tetraspanin81.6e-6244.15Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPG
        M R SN ++G LN    + SIPI+ GG+W++ + ST CE FL  P++ +G  ++VV++AG IG+C  V W LWVYL VM  LI  +  +T+F FVVT  G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMA-RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPG

Query:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D
         G EA  G+ Y+EY L  YS WL+KRV++ + W  IRSC++ SK C+KL +     P++ + +  +T +QSGCCKP   C ++ +              +
Subjt:  GGVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASW---TPLD-YLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQ------D

Query:  PDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAET
        PDC  W+NA   LC++C SCKAG+L++V+  W K++++N+V +V LI VYS+GCCAFRN KR ++
Subjt:  PDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAET

AT3G12090.1 tetraspanin64.3e-12170.73Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        MYRFSNTVIG LNL TL+ASIPIIG  L+ ARSSTTCE+FLQTPLLV+GF++L+VSLAGFIGACFNVAWALWVYLVVM+FLIATLMGLT+FG VVT  GG
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GVE P GR+Y+EY L  Y  WLR+RV+DP YW +IRSC+L SKTC K+ SWT LDY +RDMT +QSGCCKPPTAC Y+      VV    DC+RWNN   
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY
        +LCYECD+CKAGVLE++R DW KLSV+N++V+VLLI VY+ GCCAF NT+ A   Y P   NRMT+VRPRWDYYWWRW H+K+EQLY
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDY-PYGHNRMTKVRPRWDYYWWRWLHDKREQLY

AT3G45600.1 tetraspanin31.5e-6544.29Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R SN +IG +N  T + SIPI+GGG+W++   +ST C  FLQ PL+V+G  ++VVSLAGF GAC+   + +W+YLVVML +IA L+G  IF + VT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ
        G      R Y +Y+LE YSGWL+ RV D  YW  I SC+  S  C K+         T   +  R ++P++SGCCKPPT C +  +        G ++  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYDMM------AAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRP
        + DC  W+N  ++LCY+C SCKAGVL  +++ W K+SV+N+VV+++L+  Y I   A+RN KR + D P G  RMTK  P
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRP

AT4G23410.1 tetraspanin51.8e-10360.64Show/hide
Query:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        M R SNTVIGFLN+ TLI+SI ++G  LWM RS TTCE FLQ PLL++G  +L++S+AG +GAC +VAW LWVYL  M+F+I  LMGLT+FGF+VT   G
Subjt:  MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN
        GV    GRVY+E+ LE Y  WL+ RV D  YWVTI++C+LGS TC+KLA WTPLDYL++D++P+QSGCCKPPT+C Y+      V+ QDPDCYRWNNA  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPN

Query:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK
        +LCY+CD+C+AGVLE VRRDWHKLS++NV+VV+ LI VY +GCCAF+N KR +   +PYG   M+K RP W+  W RW H +
Subjt:  LLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAE-TDYPYGHNRMTKVRPRWDYYWWRWLHDK

AT5G60220.1 tetraspanin44.0e-6644.6Show/hide
Query:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG
        R  + +IG +N FT + SIPI+GGG+W++   +ST C  FLQ PL+++G  ++V+SLAG  GAC+   + +W+YL  M F+IA L+G TIF +VVT  G 
Subjt:  RFSNTVIGFLNLFTLIASIPIIGGGLWMA--RSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGG

Query:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ
        G      R Y +Y+L  YSGWL+ RV D  YW  I SCV  S  C K+         T   +  R+++P++SGCCKPPT C Y        +  G +V  
Subjt:  GVEAPGGRVYREYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKL------ASWTPLDYLERDMTPIQSGCCKPPTACNYD------MMAAGAVVAQ

Query:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKV
        +PDC  WNN   LLCY+C SCKAGVL  +++ W K+SV+N+VVV++L+  Y I C A++N KR   D P G  RMT +
Subjt:  DPDCYRWNNAPNLLCYECDSCKAGVLEDVRRDWHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGCGAGAAGCAGCACGACGTG
CGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTGCGTGGGCGCTATGGGTTT
ACTTGGTGGTCATGTTGTTTCTGATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTCACTGGGCCTGGCGGTGGAGTGGAGGCGCCTGGTGGGAGGGTGTAT
AGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGGGTCTAAAACTTGTGCTAA
GCTTGCTTCTTGGACTCCTCTTGATTATCTTGAACGAGATATGACACCAATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACGACATGATGGCGGCGGGGG
CGGTGGTGGCTCAGGATCCGGACTGCTACCGGTGGAACAATGCCCCTAACTTGTTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTTGAGGACGTTCGAAGGGAC
TGGCATAAGCTCTCCGTCCTCAATGTCGTTGTTGTCGTCCTCCTCATCGGTGTTTACTCCATTGGCTGTTGTGCCTTCCGTAACACCAAGAGAGCCGAGACCGACTACCC
TTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTATTATTGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAA
mRNA sequenceShow/hide mRNA sequence
AGGGTTTCCTTAATGTGTAAGAAGCAAGCAGAGTTGAGTCCTTATCACATGCTGATTCAGACCAACGCCACTTTAAAAACACACACAACCAACCAAATTGCACAAAAGCG
AACCCCAAAAGCTCCGATATGTATCGATTCAGCAACACGGTGATCGGGTTCTTGAACCTGTTCACGCTCATAGCCTCGATCCCGATCATCGGCGGCGGGCTGTGGATGGC
GAGAAGCAGCACGACGTGCGAGAGCTTCTTGCAGACGCCGCTGCTGGTGGTGGGGTTCGTGGTACTGGTGGTGTCTTTGGCGGGGTTCATTGGTGCTTGTTTTAACGTTG
CGTGGGCGCTATGGGTTTACTTGGTGGTCATGTTGTTTCTGATTGCGACGCTTATGGGCCTGACGATTTTTGGGTTTGTGGTCACTGGGCCTGGCGGTGGAGTGGAGGCG
CCTGGTGGGAGGGTGTATAGAGAGTACCATTTGGAGCAATATTCGGGTTGGTTGAGGAAGAGGGTTAAGGATCCGAGGTATTGGGTTACTATTAGGAGCTGTGTTTTGGG
GTCTAAAACTTGTGCTAAGCTTGCTTCTTGGACTCCTCTTGATTATCTTGAACGAGATATGACACCAATTCAGTCAGGTTGTTGCAAGCCGCCAACGGCGTGCAACTACG
ACATGATGGCGGCGGGGGCGGTGGTGGCTCAGGATCCGGACTGCTACCGGTGGAACAATGCCCCTAACTTGTTGTGCTACGAGTGCGACTCTTGTAAGGCGGGTGTCCTT
GAGGACGTTCGAAGGGACTGGCATAAGCTCTCCGTCCTCAATGTCGTTGTTGTCGTCCTCCTCATCGGTGTTTACTCCATTGGCTGTTGTGCCTTCCGTAACACCAAGAG
AGCCGAGACCGACTACCCTTATGGTCACAACCGGATGACCAAAGTTCGACCAAGATGGGACTATTATTGGTGGAGATGGTTGCATGACAAGAGAGAACAACTTTATTAAG
ATAGAAGAAATATTCGCCATTTCCAATGGTTTCTTCACTTTTTACTTTTTACTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MYRFSNTVIGFLNLFTLIASIPIIGGGLWMARSSTTCESFLQTPLLVVGFVVLVVSLAGFIGACFNVAWALWVYLVVMLFLIATLMGLTIFGFVVTGPGGGVEAPGGRVY
REYHLEQYSGWLRKRVKDPRYWVTIRSCVLGSKTCAKLASWTPLDYLERDMTPIQSGCCKPPTACNYDMMAAGAVVAQDPDCYRWNNAPNLLCYECDSCKAGVLEDVRRD
WHKLSVLNVVVVVLLIGVYSIGCCAFRNTKRAETDYPYGHNRMTKVRPRWDYYWWRWLHDKREQLY