; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G013650 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G013650
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionglycine-rich cell wall structural protein 1.0-like
Genome locationCma_Chr04:6999769..7005821
RNA-Seq ExpressionCmaCh04G013650
SyntenyCmaCh04G013650
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601160.1 hypothetical protein SDJN03_06393, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3684.48Show/hide
Query:  MPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGG
        MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA       GGGGG+SVVFD  GGGGGLP VLDGGGGGGLPVVLDG GGGGLPVVLDGAGGGG
Subjt:  MPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGG

Query:  LPVVLDGGGGGGAPSV
        LPVVLDG GGGG P V
Subjt:  LPVVLDGGGGGGAPSV

XP_022957272.1 loricrin-like [Cucurbita moschata]7.3e-4685.4Show/hide
Query:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG
        MNPKNPNKPAPIITP  MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA       GGGGG+SVVFD  GGGGGLP VLDGGGGGGLPVVLDG
Subjt:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG

Query:  GGGGGLPVVLDGAGGGGLPVVLD--GGGGGGAPSVNF
         GGGGLPVVLDGAGGGGLPVVLD  GGGGGGAPSV F
Subjt:  GGGGGLPVVLDGAGGGGLPVVLD--GGGGGGAPSVNF

XP_022990509.1 glycine-rich cell wall structural protein 1.0-like [Cucurbita maxima]1.2e-5699.22Show/hide
Query:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLP
        MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLP
Subjt:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLP

Query:  VVLDGAGGGGLPVVLDGGGGGGAPSVNF
        VVLDGAGGGGLPVVLDGGGGGGAPSV F
Subjt:  VVLDGAGGGGLPVVLDGGGGGGAPSVNF

XP_023549817.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]1.3e-4281.48Show/hide
Query:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG
        MNPKNPNKPAP+ITP  MPAFCPPLSPFESAPPFSFNA FV GAG GDE TSGEGA       GGGGG+SVVFDGGGGG  +  V +GGGGGGLPVVLD 
Subjt:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG

Query:  GGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSVNF
         GGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV F
Subjt:  GGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSVNF

XP_031741791.1 glycine-rich protein 23-like [Cucumis sativus]5.8e-2762.86Show/hide
Query:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA--------GGGGGVSVVFDGGG---------GGGGLPAVLDGGG
        +NP NPNKP P+ITP  +PAFCPPL+PFE  PPFSFNA   VG GGGDE   G GA        GGGGG  VV DGGG         GGGG   VL GGG
Subjt:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA--------GGGGGVSVVFDGGG---------GGGGLPAVLDGGG

Query:  GGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGA
        GGG  V LDGGGGGG  V LDG GGGG  V LDGGGGGGA
Subjt:  GGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGA

TrEMBL top hitse value%identityAlignment
A0A1S4DW63 loricrin-like3.9e-1365.22Show/hide
Query:  GAGGGDEFTSGEGA--------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV
        G GGGDE    +G         GGGGGVSVVFD GGGGGG+  V DGGGGGG+ VV DGGGGGG+ VV DG GGGG+ VVLDGGGGGG   V
Subjt:  GAGGGDEFTSGEGA--------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGGGAPSV

A0A6J1GYP3 loricrin-like3.5e-4685.4Show/hide
Query:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG
        MNPKNPNKPAPIITP  MPAFCPPLSPFESAPPFSFNA FV GAGGGDE TSGEGA       GGGGG+SVVFD  GGGGGLP VLDGGGGGGLPVVLDG
Subjt:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGA-------GGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDG

Query:  GGGGGLPVVLDGAGGGGLPVVLD--GGGGGGAPSVNF
         GGGGLPVVLDGAGGGGLPVVLD  GGGGGGAPSV F
Subjt:  GGGGGLPVVLDGAGGGGLPVVLD--GGGGGGAPSVNF

A0A6J1JS83 glycine-rich cell wall structural protein 1.0-like5.8e-5799.22Show/hide
Query:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLP
        MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLP
Subjt:  MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLP

Query:  VVLDGAGGGGLPVVLDGGGGGGAPSVNF
        VVLDGAGGGGLPVVLDGGGGGGAPSV F
Subjt:  VVLDGAGGGGLPVVLDGGGGGGAPSVNF

A8E425 Pectate lyase1.0e-0853.33Show/hide
Query:  LSPFESAPPFSFNA---SFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGG
        ++ F  + P +FN    +   G GGG   T   G GGGGG +    GGGGGGG P+V  GGGGGG P V  GGGGGG P V  G GGGG P V  GGGGG
Subjt:  LSPFESAPPFSFNA---SFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDGAGGGGLPVVLDGGGGG

Query:  GAPSV
        G PSV
Subjt:  GAPSV

Q8WSL3 Circumsporozoite protein4.0e-0561.36Show/hide
Query:  GAGGGDEFTSGEGAGGGGGVS-VVFDGGGGGGGL-PAVLDGGGGGG--LPVVLDGGGGGG--LPVVLDGAGGGG--LPVVLDGGGGGG
        G GGG +    +G GGGGG    V DGGGGGGG  P V+DGGGGGG   P V+DGGGGGG   P V+DG GGGG   P V+DGGGGGG
Subjt:  GAGGGDEFTSGEGAGGGGGVS-VVFDGGGGGGGL-PAVLDGGGGGG--LPVVLDGGGGGG--LPVVLDGAGGGG--LPVVLDGGGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCA
TTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGT
GGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGC
GCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGAT
GCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTAAGAATCCCAACAAGCCTGCTCCTATAATCACTCCAAAGCCAATGCCTGCCTTTTGTCCGCCACTCAGTCCTTTTGAATCTGCACCACCCTTTTCA
TTCAATGCTTCGTTCGTGGTCGGCGCCGGTGGCGGAGATGAATTTACATCAGGCGAAGGTGCGGGTGGCGGTGGTGGAGTCTCAGTGGTATTTGATGGTGGCGGT
GGCGGAGGCGGACTGCCAGCTGTGTTGGATGGCGGTGGCGGAGGTGGACTGCCGGTTGTGTTGGATGGCGGCGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGC
GCTGGCGGAGGTGGACTGCCAGTTGTGTTGGATGGCGGCGGCGGCGGCGGTGCACCATCAGTTAATTTTGAAGACGATTTGGCGTCAGGAGTGATTTACGTGGAT
GCGTGTTTTGAATTGCTACCAGAAGGTCCGGAACATATTTATTGGTACGGAAAGGAACAAGTGAAAAGGTTGGGGGAGAAATCTTAG
Protein sequenceShow/hide protein sequence
MNPKNPNKPAPIITPKPMPAFCPPLSPFESAPPFSFNASFVVGAGGGDEFTSGEGAGGGGGVSVVFDGGGGGGGLPAVLDGGGGGGLPVVLDGGGGGGLPVVLDG
AGGGGLPVVLDGGGGGGAPSVNFEDDLASGVIYVDACFELLPEGPEHIYWYGKEQVKRLGEKS