; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G013740 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G013740
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionsynaptotagmin-3-like isoform X2
Genome locationCma_Chr04:7044060..7045869
RNA-Seq ExpressionCmaCh04G013740
SyntenyCmaCh04G013740
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0008289 - lipid binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000008 - C2 domain
IPR035892 - C2 domain superfamily
IPR045050 - Synaptotagmin, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601169.1 Synaptotagmin-3, partial [Cucurbita argyrosperma subsp. sororia]1.8e-6688.08Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ SDGA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

XP_022957140.1 synaptotagmin-3-like isoform X1 [Cucurbita moschata]1.2e-6587.42Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

XP_022957141.1 synaptotagmin-3-like isoform X2 [Cucurbita moschata]1.2e-6587.42Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

XP_022957142.1 synaptotagmin-3-like isoform X3 [Cucurbita moschata]1.2e-6587.42Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

XP_023533111.1 synaptotagmin-3-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-6586.75Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSI EVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKT MIKKTRDPSWNEEFP+MLEEPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

TrEMBL top hitse value%identityAlignment
A0A1S3BFL4 synaptotagmin-3-like isoform X21.2e-5878.81Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        +FTP REESMKYLENSIS+VK+EG+S G+PENQI D A           D+EGEKH NPYAVIHFRGE+KKTKM+KKTRDP WNEEFPFMLEEPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKR V SFLQKESLGHVEINL DVV+NGR NEKYNLINS+NGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

A0A1S3BG54 synaptotagmin-3-like isoform X31.2e-5878.81Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        +FTP REESMKYLENSIS+VK+EG+S G+PENQI D A           D+EGEKH NPYAVIHFRGE+KKTKM+KKTRDP WNEEFPFMLEEPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKR V SFLQKESLGHVEINL DVV+NGR NEKYNLINS+NGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

A0A6J1GYB9 synaptotagmin-3-like isoform X35.8e-6687.42Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

A0A6J1GYE7 synaptotagmin-3-like isoform X25.8e-6687.42Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

A0A6J1GZP7 synaptotagmin-3-like isoform X15.8e-6687.42Show/hide
Query:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI
        MFTPFREESMKYLENSISEVKSEGRSNGQPENQ S GA           D+EGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFP+ML+EPPIREKI
Subjt:  MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGA-----------DIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKI

Query:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
        HIEVMSKRNV SFLQKESLGHVEINLDDVVNNGR NEKYNLINSKNGKIH+
Subjt:  HIEVMSKRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

SwissProt top hitse value%identityAlignment
A2X479 GTPase activating protein 12.7e-0426.32Show/hide
Query:  KHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLDDVV
        + ++PY ++    ++ KT++IKKT +P WN+E    +E+P +   + +EV  K   +     +++G+ E+++  +V
Subjt:  KHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLDDVV

B6ETT4 Synaptotagmin-26.9e-2443.45Show/hide
Query:  FTPFREESMKYLENSISEVKSEGRSNGQPENQ------ISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMS
        + PF+++ +   EN       E    G P         + +  D+EG+ H NP   + FRGE +KTK +KK R+P W+E+F F L+EPPI +K+H+EV+S
Subjt:  FTPFREESMKYLENSISEVKSEGRSNGQPENQ------ISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMS

Query:  KRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
          + L    KE+LG+V INL DVV+N R N+KY+LI+SKNG+I I
Subjt:  KRNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

Q6YWF1 GTPase activating protein 12.7e-0426.32Show/hide
Query:  KHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLDDVV
        + ++PY ++    ++ KT++IKKT +P WN+E    +E+P +   + +EV  K   +     +++G+ E+++  +V
Subjt:  KHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGHVEINLDDVV

Q7XA06 Synaptotagmin-36.4e-3858.33Show/hide
Query:  FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEG-EKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        + PFREES+K  + S  E  SE        G     +    D+EG +KH+NPYAV+ FRGE+KKTKM+KKTRDP WNEEF F LEEPP++E I +EVMSK
Subjt:  FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEG-EKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
             F  KE LGHV+INLDDVV+NGR N+KY+LINS+NG IHI
Subjt:  RNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

Q9SKR2 Synaptotagmin-16.4e-3048.97Show/hide
Query:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        ++ PF EE M   + E    +   EG   + G     +    D+EG+ H NPY  I+F+GE +KTK +KK RDP WNEEF FMLEEPP+REK+H+EV+S 
Subjt:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
         + +  L  KE+LG+V+I + DVVNN R N+K++LI+SKNGKI I
Subjt:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

Arabidopsis top hitse value%identityAlignment
AT2G20990.1 synaptotagmin A4.6e-3148.97Show/hide
Query:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        ++ PF EE M   + E    +   EG   + G     +    D+EG+ H NPY  I+F+GE +KTK +KK RDP WNEEF FMLEEPP+REK+H+EV+S 
Subjt:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
         + +  L  KE+LG+V+I + DVVNN R N+K++LI+SKNGKI I
Subjt:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

AT2G20990.2 synaptotagmin A4.6e-3148.97Show/hide
Query:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        ++ PF EE M   + E    +   EG   + G     +    D+EG+ H NPY  I+F+GE +KTK +KK RDP WNEEF FMLEEPP+REK+H+EV+S 
Subjt:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
         + +  L  KE+LG+V+I + DVVNN R N+K++LI+SKNGKI I
Subjt:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

AT2G20990.3 synaptotagmin A4.6e-3148.97Show/hide
Query:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        ++ PF EE M   + E    +   EG   + G     +    D+EG+ H NPY  I+F+GE +KTK +KK RDP WNEEF FMLEEPP+REK+H+EV+S 
Subjt:  MFTPFREESMK--YLENSISEVKSEG--RSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
         + +  L  KE+LG+V+I + DVVNN R N+K++LI+SKNGKI I
Subjt:  RNVLSFLQ-KESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

AT5G04220.1 Calcium-dependent lipid-binding (CaLB domain) family protein4.6e-3958.33Show/hide
Query:  FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEG-EKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        + PFREES+K  + S  E  SE        G     +    D+EG +KH+NPYAV+ FRGE+KKTKM+KKTRDP WNEEF F LEEPP++E I +EVMSK
Subjt:  FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEG-EKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
             F  KE LGHV+INLDDVV+NGR N+KY+LINS+NG IHI
Subjt:  RNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI

AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein4.6e-3958.33Show/hide
Query:  FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEG-EKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK
        + PFREES+K  + S  E  SE        G     +    D+EG +KH+NPYAV+ FRGE+KKTKM+KKTRDP WNEEF F LEEPP++E I +EVMSK
Subjt:  FTPFREESMKYLENSISEVKSEG----RSNGQPENQISDGADIEG-EKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSK

Query:  RNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI
             F  KE LGHV+INLDDVV+NGR N+KY+LINS+NG IHI
Subjt:  RNVLSFLQKESLGHVEINLDDVVNNGRTNEKYNLINSKNGKIHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACTCCTTTCAGAGAAGAAAGCATGAAATATCTTGAAAACTCAATCAGTGAGGTGAAGAGTGAAGGCAGAAGCAACGGTCAGCCGGAGAATCAGATATCGGATGG
AGCAGATATCGAAGGGGAGAAGCACAATAATCCTTACGCTGTTATACACTTCAGAGGAGAGAGGAAGAAAACGAAGATGATCAAGAAAACTCGCGACCCCTCATGGAATG
AAGAATTCCCATTTATGCTAGAGGAACCTCCCATTCGAGAAAAGATCCATATTGAAGTTATGAGCAAACGGAATGTCTTAAGTTTTCTGCAAAAGGAATCATTGGGACAC
GTGGAAATCAATCTCGACGATGTTGTAAACAACGGGAGGACAAATGAGAAGTACAATCTGATCAACTCAAAGAACGGAAAGATTCACATAGCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACTCCTTTCAGAGAAGAAAGCATGAAATATCTTGAAAACTCAATCAGTGAGGTGAAGAGTGAAGGCAGAAGCAACGGTCAGCCGGAGAATCAGATATCGGATGG
AGCAGATATCGAAGGGGAGAAGCACAATAATCCTTACGCTGTTATACACTTCAGAGGAGAGAGGAAGAAAACGAAGATGATCAAGAAAACTCGCGACCCCTCATGGAATG
AAGAATTCCCATTTATGCTAGAGGAACCTCCCATTCGAGAAAAGATCCATATTGAAGTTATGAGCAAACGGAATGTCTTAAGTTTTCTGCAAAAGGAATCATTGGGACAC
GTGGAAATCAATCTCGACGATGTTGTAAACAACGGGAGGACAAATGAGAAGTACAATCTGATCAACTCAAAGAACGGAAAGATTCACATAGCTAATTAA
Protein sequenceShow/hide protein sequence
MFTPFREESMKYLENSISEVKSEGRSNGQPENQISDGADIEGEKHNNPYAVIHFRGERKKTKMIKKTRDPSWNEEFPFMLEEPPIREKIHIEVMSKRNVLSFLQKESLGH
VEINLDDVVNNGRTNEKYNLINSKNGKIHIAN