; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G013880 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G013880
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionglycine-rich RNA-binding protein RZ1C-like isoform X1
Genome locationCma_Chr04:7090761..7096290
RNA-Seq ExpressionCmaCh04G013880
SyntenyCmaCh04G013880
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648851.1 hypothetical protein Csa_008374 [Cucumis sativus]1.0e-14289.16Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----

Query:  -----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYGT
                   GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGDSDRGDRFAGD NRYVDDRY+GGGRFGDRDRFD +SRD+KYG+
Subjt:  -----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYGT

Query:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        RDRYVS+RYPPGGDRFGSSRY NDSDRFP+NGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRP+RGGRPSSFDRY
Subjt:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_022956605.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita moschata]6.9e-15599.63Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
        MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD

Query:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
        RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
Subjt:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF

Query:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GSSRYNNDSDRFP+NGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_023003387.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita maxima]5.3e-155100Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
        MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD

Query:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
        RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
Subjt:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF

Query:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_023535688.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Cucurbita pepo subsp. pepo]5.8e-15499.26Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
        MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD

Query:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
        RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
Subjt:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF

Query:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GSSRYNNDSDRFP NGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRP PYDRPSRGGRPSSFDRY
Subjt:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

XP_038892830.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Benincasa hispida]2.5e-14489.9Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----

Query:  ------------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYG
                    GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL R+RLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD +SRD+KYG
Subjt:  ------------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYG

Query:  TRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        +RDRYVSERYPPGGDRFGSSRYNNDSDRFP+NGYGKDRGYYRDGGPRGVDKYGSGGPAR+EGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  TRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

TrEMBL top hitse value%identityAlignment
A0A1S3BGN5 glycine-rich RNA-binding protein RZ1C-like isoform X17.2e-14289.47Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----

Query:  ----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYGTR
                  GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGGRFGDRDRFD +SRD+KYG+R
Subjt:  ----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYGTR

Query:  DRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        DRYVS+RYPPGGDRFGS RYNNDSDRFP+NGYGKDRGYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  DRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A5D3CG30 Glycine-rich RNA-binding protein RZ1C-like isoform X17.2e-14289.47Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----
        MAGREEYRIFVGGLSWDITER LENAF+RFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHG+EFGERIISVNKAEPKMGED+DHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----

Query:  ----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYGTR
                  GGGDRSARQDECFKCGR GHWARDCPSVGGGRGRGGDSFL RSRLGD DRGDRFAGD NRYVDDRYEGGGRFGDRDRFD +SRD+KYG+R
Subjt:  ----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFD-NSRDSKYGTR

Query:  DRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        DRYVS+RYPPGGDRFGS RYNNDSDRFP+NGYGKDRGYYRD GPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  DRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A6J1CFE7 glycine-rich RNA-binding protein RZ1C-like isoform X13.2e-13483.06Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----
        MAGREEYRIFVGGLSWDITER LENAFSRFGKIIDSQIMLEKNTGR RGFGFITFSDRRGMDDAIREMHG+E GERIISVNKAEPKMGEDIDHGYR    
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYR----

Query:  -----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTR
                   GGGD+SARQDECFKCGR GHWARDC SVGGGRGR GDSFL RSRLGDSDRGDRFAGDNNRYVDDRYE GGRFGDRDRFD+SRD+KY +R
Subjt:  -----------GGGDRSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTR

Query:  DRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRG----------------YYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR
        DRYVS+RYPP GDRFGSS YNNDSDRFP+NGYGKDRG                YYRDGGPRG+DKYGSGGPARDEGRSYRNRPAPYDRPSR GRPSSFDR
Subjt:  DRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRG----------------YYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDR

Query:  Y
        Y
Subjt:  Y

A0A6J1GY86 glycine-rich RNA-binding protein RZ1C-like isoform X13.3e-15599.63Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
        MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD

Query:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
        RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
Subjt:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF

Query:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GSSRYNNDSDRFP+NGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

A0A6J1KMD7 glycine-rich RNA-binding protein RZ1C-like isoform X12.6e-155100Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
        MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGD

Query:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
        RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF
Subjt:  RSARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRF

Query:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
        GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY
Subjt:  GSSRYNNDSDRFPINGYGKDRGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B1.4e-7055.21Show/hide
Query:  GREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKM-GEDIDHGYRGGGDR
        G  E RIFVGGLSWD+TER LE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHGRE G ++ISVNKAEPK+ GED+D   +GGG  
Subjt:  GREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKM-GEDIDHGYRGGGDR

Query:  S---ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDRFDNSRDSKYGT
        S     +DECFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             +RY+D R +  GGR+  RDRFD+    KY  
Subjt:  S---ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDRFDNSRDSKYGT

Query:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY
        RD Y  ERY P GDRF S RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Subjt:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY

Q03250 Glycine-rich RNA-binding protein 71.9e-2241.18Show/hide
Query:  AGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDR
        +G  EYR FVGGL+W   +R LE AF+++G +IDS+I+ ++ TGR RGFGF+TF D + M DAI  M+G++   R I+VN+A+ + G     G+RGGG  
Subjt:  AGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDR

Query:  SARQDECFKCGRHGHWARDCPSVGGGRGR--GGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFG
               ++ G  G ++    S GGG GR  GG  + +    G S RG    G    Y   R EGGG +G
Subjt:  SARQDECFKCGRHGHWARDCPSVGGGRGR--GGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C2.2e-7154.17Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGED--IDHGYRGG
        MA +E  RIFVGGLS ++T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR MD++IREMHGR+FG+R+ISVN+AEPK+G D    HG RGG
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGED--IDHGYRGG

Query:  GDRS------------------ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR
         D                      +DECFKCGR GHWARDCPS GGGRG     F +R S  G SD R DR+A      D  RY+DDRY+G  R+G RDR
Subjt:  GDRS------------------ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR

Query:  FDNSRDSKYGTRDRYVSERYPPGGDRF-GSSRYNNDSDRFPINGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG--
        FD SR++ Y  RDRY S+RY    DRF G  RY+  SDR+P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G  
Subjt:  FDNSRDSKYGTRDRYVSERYPPGGDRF-GSSRYNNDSDRFPINGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG--

Query:  ----RPSSFDRY
              S+FDRY
Subjt:  ----RPSSFDRY

Q99070 Glycine-rich RNA-binding protein 28.0e-2137.64Show/hide
Query:  EYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQ
        EYR FVGGL+W      LE AF+ FG++IDS+++ ++ TGR RGFGF+TFS  + M DAI  M+G+E   R I+VN+A+ + G     GY GGG      
Subjt:  EYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQ

Query:  DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYG
                 G+  R+    GGG G GG  +  R   G    G  + G    Y     EGGG +G    +  +R    G
Subjt:  DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYG

Q9LIN3 Glycine-rich RNA-binding protein RZ1A3.1e-3335.79Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMG-----EDIDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G 
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMG-----EDIDHGY

Query:  RGGGDRSARQ-------DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRY
          G DR   +        +CFKCG+ GH+AR+CPS                   +S R                +GGGRF  +D   +S+D +YG +D  
Subjt:  RGGGDRSARQ-------DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRY

Query:  VSERYPPGGDRFGS--SRYNNDSDRFPINGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG
          +RY    DR+G+   RY++  DR+       DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Subjt:  VSERYPPGGDRFGS--SRYNNDSDRFPINGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.0e-7155.21Show/hide
Query:  GREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKM-GEDIDHGYRGGGDR
        G  E RIFVGGLSWD+TER LE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHGRE G ++ISVNKAEPK+ GED+D   +GGG  
Subjt:  GREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKM-GEDIDHGYRGGGDR

Query:  S---ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDRFDNSRDSKYGT
        S     +DECFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             +RY+D R +  GGR+  RDRFD+    KY  
Subjt:  S---ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDRFDNSRDSKYGT

Query:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY
        RD Y  ERY P GDRF S RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Subjt:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.0e-7155.21Show/hide
Query:  GREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKM-GEDIDHGYRGGGDR
        G  E RIFVGGLSWD+TER LE+ F R+GKI + QIM+ ++TGRPRGFGFITF+DRRG DDAI+ MHGRE G ++ISVNKAEPK+ GED+D   +GGG  
Subjt:  GREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKM-GEDIDHGYRGGGDR

Query:  S---ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDRFDNSRDSKYGT
        S     +DECFKC R GHWARDCPS G  R R       RSR+GD D   DR+ GD             +RY+D R +  GGR+  RDRFD+    KY  
Subjt:  S---ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSD-RGDRFAGDN------------NRYVDDRYE-GGGRFGDRDRFDNSRDSKYGT

Query:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY
        RD Y  ERY P GDRF S RY            G++R Y RD   R   D+YG  GP RDEGR YR+RP PYDRPSR GGRPSS++R+
Subjt:  RDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKDRGYYRDGGPRGV-DKYGSGGPARDEGRSYRNRPAPYDRPSR-GGRPSSFDRY

AT2G21660.1 cold, circadian rhythm, and rna binding 21.3e-2341.18Show/hide
Query:  AGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDR
        +G  EYR FVGGL+W   +R LE AF+++G +IDS+I+ ++ TGR RGFGF+TF D + M DAI  M+G++   R I+VN+A+ + G     G+RGGG  
Subjt:  AGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDR

Query:  SARQDECFKCGRHGHWARDCPSVGGGRGR--GGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFG
               ++ G  G ++    S GGG GR  GG  + +    G S RG    G    Y   R EGGG +G
Subjt:  SARQDECFKCGRHGHWARDCPSVGGGRGR--GGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain2.2e-3435.79Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMG-----EDIDHGY
        M+   EYR F+GGL+W  ++R L +AF ++G +++++++L+K +GR RGFGFITF +++ MD+AI  M+G +   R I+V+KA+P  G      D D G 
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMG-----EDIDHGY

Query:  RGGGDRSARQ-------DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRY
          G DR   +        +CFKCG+ GH+AR+CPS                   +S R                +GGGRF  +D   +S+D +YG +D  
Subjt:  RGGGDRSARQ-------DECFKCGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRY

Query:  VSERYPPGGDRFGS--SRYNNDSDRFPINGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG
          +RY    DR+G+   RY++  DR+       DR   RDGG    G D+ G  +GG +RD G        R+  APYDRP  GG
Subjt:  VSERYPPGGDRFGS--SRYNNDSDRFPINGYGKDRGYYRDGGPR--GVDKYG--SGGPARDEGR-----SYRNRPAPYDRPSRGG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain1.6e-7254.17Show/hide
Query:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGED--IDHGYRGG
        MA +E  RIFVGGLS ++T+R LE AFSRFG I+D QIMLE++TGR RGFGFITF+DRR MD++IREMHGR+FG+R+ISVN+AEPK+G D    HG RGG
Subjt:  MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGED--IDHGYRGG

Query:  GDRS------------------ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR
         D                      +DECFKCGR GHWARDCPS GGGRG     F +R S  G SD R DR+A      D  RY+DDRY+G  R+G RDR
Subjt:  GDRS------------------ARQDECFKCGRHGHWARDCPSVGGGRGRGGDSFLTR-SRLGDSD-RGDRFAG-----DNNRYVDDRYEGGGRFGDRDR

Query:  FDNSRDSKYGTRDRYVSERYPPGGDRF-GSSRYNNDSDRFPINGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG--
        FD SR++ Y  RDRY S+RY    DRF G  RY+  SDR+P   Y K R + RD  P  G D+YG   +GGP R   +EGR +R+R  APY+RPSR G  
Subjt:  FDNSRDSKYGTRDRYVSERYPPGGDRF-GSSRYNNDSDRFPINGYGKDRGYYRDGGP-RGVDKYG---SGGPAR---DEGRSYRNRP-APYDRPSRGG--

Query:  ----RPSSFDRY
              S+FDRY
Subjt:  ----RPSSFDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGAGAGAGGAGTACCGAATATTTGTGGGAGGGTTATCGTGGGACATCACGGAGCGTCTGCTTGAGAATGCCTTCAGTCGATTCGGCAAAATTATCGATTCTCA
GATCATGTTGGAAAAGAATACTGGCCGCCCACGTGGCTTTGGGTTTATTACATTTTCAGATCGTCGGGGAATGGATGATGCCATCAGAGAGATGCATGGACGGGAATTTG
GAGAACGAATCATTTCAGTGAACAAGGCTGAACCTAAAATGGGAGAAGATATAGACCATGGTTACAGGGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAA
TGTGGGCGTCATGGACACTGGGCTAGAGATTGTCCTTCAGTGGGTGGTGGCCGAGGAAGGGGAGGAGACTCGTTTCTTACACGTTCTCGGCTTGGGGATAGTGATCGTGG
GGATCGCTTTGCTGGAGATAACAATCGATATGTGGATGATCGTTATGAAGGTGGCGGGCGCTTTGGAGATCGGGATCGTTTTGATAACAGCAGGGACAGCAAATATGGAA
CTCGTGATCGCTATGTCAGTGAAAGATACCCACCTGGTGGAGATCGCTTTGGTAGCAGTAGGTACAATAACGATTCTGATCGTTTTCCCATAAATGGCTATGGCAAAGAT
AGGGGGTATTATAGAGATGGTGGACCTCGTGGGGTTGATAAGTATGGAAGTGGCGGTCCAGCACGTGACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTATGATCG
CCCTAGCCGAGGTGGGCGGCCATCCTCATTTGATCGTTATTGA
mRNA sequenceShow/hide mRNA sequence
AATCTATCAGAATATTTCACTCCAACCGCGCGAACCAGGAGGATTTTTTTTTTTTTTTTTTCTGAAATCCGGAGATTGGTATGGCTGGGAGAGAGGAGTACCGAATATTT
GTGGGAGGGTTATCGTGGGACATCACGGAGCGTCTGCTTGAGAATGCCTTCAGTCGATTCGGCAAAATTATCGATTCTCAGATCATGTTGGAAAAGAATACTGGCCGCCC
ACGTGGCTTTGGGTTTATTACATTTTCAGATCGTCGGGGAATGGATGATGCCATCAGAGAGATGCATGGACGGGAATTTGGAGAACGAATCATTTCAGTGAACAAGGCTG
AACCTAAAATGGGAGAAGATATAGACCATGGTTACAGGGGGGGAGGAGATAGATCTGCGAGGCAAGATGAATGCTTCAAATGTGGGCGTCATGGACACTGGGCTAGAGAT
TGTCCTTCAGTGGGTGGTGGCCGAGGAAGGGGAGGAGACTCGTTTCTTACACGTTCTCGGCTTGGGGATAGTGATCGTGGGGATCGCTTTGCTGGAGATAACAATCGATA
TGTGGATGATCGTTATGAAGGTGGCGGGCGCTTTGGAGATCGGGATCGTTTTGATAACAGCAGGGACAGCAAATATGGAACTCGTGATCGCTATGTCAGTGAAAGATACC
CACCTGGTGGAGATCGCTTTGGTAGCAGTAGGTACAATAACGATTCTGATCGTTTTCCCATAAATGGCTATGGCAAAGATAGGGGGTATTATAGAGATGGTGGACCTCGT
GGGGTTGATAAGTATGGAAGTGGCGGTCCAGCACGTGACGAGGGAAGAAGCTACAGGAACAGACCAGCTCCTTATGATCGCCCTAGCCGAGGTGGGCGGCCATCCTCATT
TGATCGTTATTGAATGTTTTGTTGTTAGATAGCGCACATTTTCTGGTTTATCTAGTAAAAGTGTACTACATGCTGGGTGTTGTGCTGTTAGTTATCTAGGATTTAGTTGC
AGTACCGTGGCCCGACCGACAGACAGATTGTTGCGGTTTCGTCTAGCTTTCATGTATCTGATTTTTTGTTCAGAGACAAGATAAATGCTCTGAAGAACGATGAATGGACA
GAGACAGATTTAAGTTGACAATTTTGTGATTCCTAAAATGTTGAGCTGATTGTCGGACTGAGCTGACATACGAAGGTTGAGTCGGGGGACCCCGAGGCTCGTTTGAATCG
TAAGCCACAAAACAGATTAGTAAATACAATTCTAGAAGCAAGAGGCTCCTCTCCATGTTTGTGTATTGAGCAGCACCTAGTTCTCTGCCGGATAGAGCTATCATAGAGGA
AGTATGAAGCTTGAAATTGGCCTCTCCATAAGCACCCAGAACCCTCCTGTCGGATTTATGTCATTTACGTCTTCTATCAATCAGAAATTCAAATAATATCTCGTTTGGAT
GAACTGTTATTATGAAGCTTGAAATTGGCACCAAGAACTCTCCTGTCGATCTGAACATTGGTCAATTAAGATTTACGTCATTTATGTCATCTATGGATCAGAAATTCAAA
TAATATCTCGTCTGGATGATCGGGCAATAAAGCAGCTGTCATTTTTGGATAAACTCCCACAAGTCCAATGGTGTGATAGATGAATTCCAAATCATTGACAATGGGCAAAT
ATGATGACCATAAAACAAATATTGAATGTATTGATATCATCTTTATCTTTTGGTTGAATCTTGAATATGCTTCTTGGAACGAAATTAATTGAAAACTATACTCTCTGGCT
GTCCATCTTCTGGCATCATATTCACAAGTCAACCTCCATGTTCTTGGGAAAGTAAAAACATTTATATTTAATTATAC
Protein sequenceShow/hide protein sequence
MAGREEYRIFVGGLSWDITERLLENAFSRFGKIIDSQIMLEKNTGRPRGFGFITFSDRRGMDDAIREMHGREFGERIISVNKAEPKMGEDIDHGYRGGGDRSARQDECFK
CGRHGHWARDCPSVGGGRGRGGDSFLTRSRLGDSDRGDRFAGDNNRYVDDRYEGGGRFGDRDRFDNSRDSKYGTRDRYVSERYPPGGDRFGSSRYNNDSDRFPINGYGKD
RGYYRDGGPRGVDKYGSGGPARDEGRSYRNRPAPYDRPSRGGRPSSFDRY