; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G014380 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G014380
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionglycine-rich RNA-binding protein GRP1A-like
Genome locationCma_Chr04:7333695..7337354
RNA-Seq ExpressionCmaCh04G014380
SyntenyCmaCh04G014380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601227.1 hypothetical protein SDJN03_06460, partial [Cucurbita argyrosperma subsp. sororia]5.4e-4897.27Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
        E NYHQKTNAEKHG+DGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGR RNAGNHYENNMGLLVASVL
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL

Query:  AAIAHLHLVF
        AAIAHLHLVF
Subjt:  AAIAHLHLVF

XP_022957462.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata]1.6e-4796.36Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
        E NYHQKTNAEKHG+DGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGR RNAGNHYENNMGLLVASVL
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL

Query:  AAIAHLHLVF
        AAI HLHLVF
Subjt:  AAIAHLHLVF

XP_022987717.1 uncharacterized protein LOC111485159 [Cucurbita maxima]2.6e-50100Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
        EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL

Query:  AAIAHLHLVF
        AAIAHLHLVF
Subjt:  AAIAHLHLVF

XP_023517064.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]5.4e-4897.27Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
        E NYHQKTNAEKHG+DGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGR RNAGNHYENNMGLLVASVL
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL

Query:  AAIAHLHLVF
        AAIAHLHLVF
Subjt:  AAIAHLHLVF

XP_038892711.1 uncharacterized protein LOC120081693 [Benincasa hispida]1.5e-2973.87Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSA-AGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASV
        E NY QKT  EK  +DG+TN+I+  YSA  ITVS GIG GSA AGGGENGGG RP   GGG AVIPVYAAGSAQAHHRQGRP NAGN +ENN GLLVA+V
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSA-AGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASV

Query:  LAAIAHLHLVF
        LAAIAHL+ VF
Subjt:  LAAIAHLHLVF

TrEMBL top hitse value%identityAlignment
A0A0A0KUR6 Uncharacterized protein4.8e-2654.09Show/hide
Query:  GKKKGAKLDVLAVLFYHTSHFICSPTTNPPNSFYMYAEPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQ------------GIGHGSAAGGGENGGG
        G+++G +L    +     S    S        F    E NY QKT  +KHG+ GVTN+I+  YS+ AITVS             G G  +AAGGGEN GG
Subjt:  GKKKGAKLDVLAVLFYHTSHFICSPTTNPPNSFYMYAEPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQ------------GIGHGSAAGGGENGGG

Query:  GRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVLAAIAHLHLVF
         RP+  GGG AVIPVYAAGSAQAHHRQGR  NAGN YENNMGLLVA+VLAAIAHL  VF
Subjt:  GRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVLAAIAHLHLVF

A0A1S3BFU8 uncharacterized protein LOC1034893822.8e-2670.18Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGI----GHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLV
        E NY QKT   K G+ GVTN+IS  YSA AITVS  I    G  +AAGGGENGGG RP   GGG AVIPVYAAGSAQA HRQGRP NAGN YENN GLLV
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGI----GHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLV

Query:  ASVLAAIAHLHLVF
        A+VLAAIAHL  V+
Subjt:  ASVLAAIAHLHLVF

A0A5A7SUI0 Uncharacterized protein2.8e-2670.18Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGI----GHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLV
        E NY QKT   K G+ GVTN+IS  YSA AITVS  I    G  +AAGGGENGGG RP   GGG AVIPVYAAGSAQA HRQGRP NAGN YENN GLLV
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGI----GHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLV

Query:  ASVLAAIAHLHLVF
        A+VLAAIAHL  V+
Subjt:  ASVLAAIAHLHLVF

A0A6J1GZ71 glycine-rich RNA-binding protein GRP1A-like7.6e-4896.36Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
        E NYHQKTNAEKHG+DGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGR RNAGNHYENNMGLLVASVL
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL

Query:  AAIAHLHLVF
        AAI HLHLVF
Subjt:  AAIAHLHLVF

A0A6J1JB47 uncharacterized protein LOC1114851591.2e-50100Show/hide
Query:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
        EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL
Subjt:  EPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYENNMGLLVASVL

Query:  AAIAHLHLVF
        AAIAHLHLVF
Subjt:  AAIAHLHLVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACATAGTTATTGGACTTGGTGGCGGAGGAGGATCCGGTGGAGGAGGTCGTGGTGGCAGTGGAGGAGGATCCTCAGGAGGAGGACGTGGTGGCGGAGGAGGATCCCC
AGGACGAGGTCGTGGTGGTGGTGGGGGAGGATCCGCAGGAGGAGGTAGTGGCGGCGGGGGAGGATCCACCGGAGGAGGTAGTGGTGGCGGGGGAGGATCGGAAGGAGGAG
GTCGTGGTGGGAGAGGAGGAGCTCACTCTGGCACAGGAAATTGGCATCAGAACTCCATGAGCCATATACAGAAGGATCTAGATAACACAAAACCCACCTGTTTCTATTAC
TATGGGAAGAAGAAGGGAGCTAAGCTTGATGTTCTTGCTGTTTTGTTCTACCATACCAGCCATTTCATCTGCTCGCCAACAACAAATCCTCCCAACAGTTTCTATATGTA
TGCAGAGCCAAATTACCACCAGAAAACTAATGCAGAAAAACATGGCCAGGATGGTGTCACTAACCGGATTAGCAGCATATACAGTGCAAGGGCAATCACCGTTTCTCAAG
GGATTGGTCATGGAAGTGCCGCCGGTGGCGGAGAAAATGGTGGTGGCGGTAGACCTCAAGCAGGAGGCGGAGGTGCGGCCGTAATCCCTGTTTATGCCGCTGGTTCGGCA
CAAGCACATCATCGCCAAGGTCGACCGCGCAATGCAGGAAATCACTATGAAAACAACATGGGGCTTCTGGTAGCTTCAGTTTTGGCCGCCATTGCTCATCTCCATTTAGT
TTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACATAGTTATTGGACTTGGTGGCGGAGGAGGATCCGGTGGAGGAGGTCGTGGTGGCAGTGGAGGAGGATCCTCAGGAGGAGGACGTGGTGGCGGAGGAGGATCCCC
AGGACGAGGTCGTGGTGGTGGTGGGGGAGGATCCGCAGGAGGAGGTAGTGGCGGCGGGGGAGGATCCACCGGAGGAGGTAGTGGTGGCGGGGGAGGATCGGAAGGAGGAG
GTCGTGGTGGGAGAGGAGGAGCTCACTCTGGCACAGGAAATTGGCATCAGAACTCCATGAGCCATATACAGAAGGATCTAGATAACACAAAACCCACCTGTTTCTATTAC
TATGGGAAGAAGAAGGGAGCTAAGCTTGATGTTCTTGCTGTTTTGTTCTACCATACCAGCCATTTCATCTGCTCGCCAACAACAAATCCTCCCAACAGTTTCTATATGTA
TGCAGAGCCAAATTACCACCAGAAAACTAATGCAGAAAAACATGGCCAGGATGGTGTCACTAACCGGATTAGCAGCATATACAGTGCAAGGGCAATCACCGTTTCTCAAG
GGATTGGTCATGGAAGTGCCGCCGGTGGCGGAGAAAATGGTGGTGGCGGTAGACCTCAAGCAGGAGGCGGAGGTGCGGCCGTAATCCCTGTTTATGCCGCTGGTTCGGCA
CAAGCACATCATCGCCAAGGTCGACCGCGCAATGCAGGAAATCACTATGAAAACAACATGGGGCTTCTGGTAGCTTCAGTTTTGGCCGCCATTGCTCATCTCCATTTAGT
TTTCTGA
Protein sequenceShow/hide protein sequence
MHIVIGLGGGGGSGGGGRGGSGGGSSGGGRGGGGGSPGRGRGGGGGGSAGGGSGGGGGSTGGGSGGGGGSEGGGRGGRGGAHSGTGNWHQNSMSHIQKDLDNTKPTCFYY
YGKKKGAKLDVLAVLFYHTSHFICSPTTNPPNSFYMYAEPNYHQKTNAEKHGQDGVTNRISSIYSARAITVSQGIGHGSAAGGGENGGGGRPQAGGGGAAVIPVYAAGSA
QAHHRQGRPRNAGNHYENNMGLLVASVLAAIAHLHLVF