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CmaCh04G014570 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G014570
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionneurofilament heavy polypeptide-like
Genome locationCma_Chr04:7412686..7414269
RNA-Seq ExpressionCmaCh04G014570
SyntenyCmaCh04G014570
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601244.1 Protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-3944.34Show/hide
Query:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP----------------------GPNFG----LFF--------------------
        MATTRPRTAGLGVYRRQSQRVYNEPFTP VEERDENEAHILLLKLP                      G N G    L                      
Subjt:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP----------------------GPNFG----LFF--------------------

Query:  ----------------------------------------------------------------------------------------ASAKANEENPTP
                                                                                                ASAKANEE PTP
Subjt:  ----------------------------------------------------------------------------------------ASAKANEENPTP

Query:  AAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAV
            AERG                       KPTEKK+IENQN EKGRESKTEEADKNVGTAKIDAVTP+PRTTRVGKLAGG TVRRMQLLTTVSLWAAV
Subjt:  AAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAV

Query:  VTAVAAYFA
        V AVAAYFA
Subjt:  VTAVAAYFA

KAG7032034.1 Protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-4145.37Show/hide
Query:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP----------------------GPNFG----LFF--------------------
        MATTRPRTAGLGVYRRQSQRVYNEPFTP VEERDENEAHILLLKLP                      G N G    L                      
Subjt:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP----------------------GPNFG----LFF--------------------

Query:  ----------------------------------------------------------------------------------------ASAKANEENPTP
                                                                                                ASAKANEE PTP
Subjt:  ----------------------------------------------------------------------------------------ASAKANEENPTP

Query:  ----AAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSL
            AAAAAERG                       KPTEKKEIENQN EKGRESKTEEADKNVGTAKIDAVTPSPRTT VGKLAGG TVRRMQLLTTVSL
Subjt:  ----AAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSL

Query:  WAAVVTAVAAYFA
        WAAVV AVAAYFA
Subjt:  WAAVVTAVAAYFA

XP_022957158.1 uncharacterized protein LOC111458627 [Cucurbita moschata]1.3e-2872.73Show/hide
Query:  ASAKANEENPTPAAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRM
        ASAKANEE P   AAAAERG                       KPTEKKEIENQNPEKGRESKTEE DKNVGTAKIDAVTPSPRTTRVGKL GGFTV+RM
Subjt:  ASAKANEENPTPAAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRM

Query:  QLLTTVSLWAAVVTAVAAYFA
        QLLTTVSL AAVV AV AYFA
Subjt:  QLLTTVSLWAAVVTAVAAYFA

XP_023551679.1 inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita pepo subsp. pepo]1.7e-4145.66Show/hide
Query:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP----------------------GPNFG----LFF--------------------
        MATTRPRTAGLGVYRRQSQRVYNEPFTP VEERDENEAHILLL+LP                      G N G    L                      
Subjt:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP----------------------GPNFG----LFF--------------------

Query:  ----------------------------------------------------------------------------------------ASAKANEE--NP
                                                                                                ASAKANEE   P
Subjt:  ----------------------------------------------------------------------------------------ASAKANEE--NP

Query:  TPAAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWA
        TPAAAAAERG                       KPTEKKEIENQN EKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGG TVRRMQLLTTVSLWA
Subjt:  TPAAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWA

Query:  AVVTAVAAYFA
        AVV AVAAYFA
Subjt:  AVVTAVAAYFA

XP_038891748.1 protein RESTRICTED TEV MOVEMENT 2-like [Benincasa hispida]5.5e-1654.24Show/hide
Query:  ANEENPTPA------AAAAERGP-----------------KPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLL
        A EE PTPA       AAAE+ P                  P + +EIENQ+P+KG++SK+EE DKN  TAKI   TPSPR T+VGKLAGGFTVRR+ L 
Subjt:  ANEENPTPA------AAAAERGP-----------------KPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLL

Query:  TTVSLWAAVVTAVAAYFA
         TVSL A V  AVAAYFA
Subjt:  TTVSLWAAVVTAVAAYFA

XP_038891748.1 protein RESTRICTED TEV MOVEMENT 2-like [Benincasa hispida]3.4e-1078.26Show/hide
Query:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP
        MAT RPR  GLG  RRQS RVYNEPFTPNVEE DE EAHIL L+LP
Subjt:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP

TrEMBL top hitse value%identityAlignment
A0A0A0KTC3 SHSP domain-containing protein2.8e-0537.07Show/hide
Query:  RPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLPGPNFGLFFASAKANEENPTPAAAAAERGPKPTEKKEIENQNPEKGRESKTEEADKNVG
        RPR  GLG  RRQS R YN+ FTPNVEE DENEAHIL L+LPG      F+    N E               T + +I ++     + SK +E    + 
Subjt:  RPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLPGPNFGLFFASAKANEENPTPAAAAAERGPKPTEKKEIENQNPEKGRESKTEEADKNVG

Query:  TAKIDAVTPSPRTTRV
           +    P   T  V
Subjt:  TAKIDAVTPSPRTTRV

A0A0A0KTC3 SHSP domain-containing protein5.2e-1249.59Show/hide
Query:  ASAKANEENPTPAAAAAERGP----------------------KPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRM
        ASA A EE P   AAAAE+GP                      KPTEK+EIENQNPE+G+ESKTEE  KN    K+    PSP  T   K A G TV RM
Subjt:  ASAKANEENPTPAAAAAERGP----------------------KPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRM

Query:  QLLTTVSLWAAVVTAVAAYFA
              SL AA V AVAAYFA
Subjt:  QLLTTVSLWAAVVTAVAAYFA

A0A1S3BFR5 neurofilament heavy polypeptide-like3.5e-0873.91Show/hide
Query:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP
        MAT RPR   LG+ RRQS R YNEPFTP+VEE DENEAHIL L+LP
Subjt:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP

A0A1S3BFR5 neurofilament heavy polypeptide-like1.4e-1251.72Show/hide
Query:  SAKA-NEENPTPAAAAAERGPKPT-----------------EKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTT
        SAKA  EE PTPA   A + P  T                 +KKEI N+NPE G+ESKTEE  KN  T +    TPSPR T+VGKL G F +RR+ L TT
Subjt:  SAKA-NEENPTPAAAAAERGPKPT-----------------EKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTT

Query:  VSLWAAVVTAVAAYFA
        VSL A V  AVAAYFA
Subjt:  VSLWAAVVTAVAAYFA

A0A5D3CB04 Neurofilament heavy polypeptide-like3.2e-1468.92Show/hide
Query:  EKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAVVTAVAAYF
        + KEIENQNPEKG+ESKTEE  KN  TA+I   TPSPR T+VGKLAGGFT+R + L  TVS+ A VV AVAAYF
Subjt:  EKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAVVTAVAAYF

A0A5D3CB04 Neurofilament heavy polypeptide-like3.5e-0873.91Show/hide
Query:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP
        MAT RPR   LG+ RRQS R YNEPFTP+VEE DENEAHIL L+LP
Subjt:  MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLP

A0A5D3CB04 Neurofilament heavy polypeptide-like3.2e-1468.92Show/hide
Query:  EKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAVVTAVAAYF
        + KEIENQNPEKG+ESKTEE  KN  TA+I   TPSPR T+VGKLAGGFT+R + L  TVS+ A VV AVAAYF
Subjt:  EKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAVVTAVAAYF

A0A6J1GZF3 uncharacterized protein LOC1114586276.1e-2972.73Show/hide
Query:  ASAKANEENPTPAAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRM
        ASAKANEE P   AAAAERG                       KPTEKKEIENQNPEKGRESKTEE DKNVGTAKIDAVTPSPRTTRVGKL GGFTV+RM
Subjt:  ASAKANEENPTPAAAAAERG----------------------PKPTEKKEIENQNPEKGRESKTEEADKNVGTAKIDAVTPSPRTTRVGKLAGGFTVRRM

Query:  QLLTTVSLWAAVVTAVAAYFA
        QLLTTVSL AAVV AV AYFA
Subjt:  QLLTTVSLWAAVVTAVAAYFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCACAAGGCCAAGAACCGCCGGACTCGGCGTCTACCGCCGTCAATCCCAGCGGGTTTACAACGAGCCCTTCACTCCCAACGTCGAAGAAAGAGATGAA
AACGAAGCTCATATTCTACTGCTCAAACTTCCTGGTCCTAATTTTGGCCTGTTCTTCGCCTCGGCGAAGGCTAATGAAGAAAATCCGACGCCGGCGGCGGCGGCG
GCTGAAAGGGGTCCGAAGCCAACAGAGAAGAAAGAAATTGAAAATCAAAATCCAGAAAAGGGGAGGGAATCTAAAACAGAGGAGGCAGATAAGAATGTGGGAACA
GCCAAGATCGACGCCGTAACTCCATCTCCGAGAACGACCAGAGTAGGGAAACTTGCCGGCGGCTTCACTGTCCGAAGGATGCAGTTACTGACGACGGTGAGTCTC
TGGGCGGCGGTTGTGACAGCGGTGGCGGCATATTTCGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCACAAGGCCAAGAACCGCCGGACTCGGCGTCTACCGCCGTCAATCCCAGCGGGTTTACAACGAGCCCTTCACTCCCAACGTCGAAGAAAGAGATGAA
AACGAAGCTCATATTCTACTGCTCAAACTTCCTGGTCCTAATTTTGGCCTGTTCTTCGCCTCGGCGAAGGCTAATGAAGAAAATCCGACGCCGGCGGCGGCGGCG
GCTGAAAGGGGTCCGAAGCCAACAGAGAAGAAAGAAATTGAAAATCAAAATCCAGAAAAGGGGAGGGAATCTAAAACAGAGGAGGCAGATAAGAATGTGGGAACA
GCCAAGATCGACGCCGTAACTCCATCTCCGAGAACGACCAGAGTAGGGAAACTTGCCGGCGGCTTCACTGTCCGAAGGATGCAGTTACTGACGACGGTGAGTCTC
TGGGCGGCGGTTGTGACAGCGGTGGCGGCATATTTCGCATAG
Protein sequenceShow/hide protein sequence
MATTRPRTAGLGVYRRQSQRVYNEPFTPNVEERDENEAHILLLKLPGPNFGLFFASAKANEENPTPAAAAAERGPKPTEKKEIENQNPEKGRESKTEEADKNVGT
AKIDAVTPSPRTTRVGKLAGGFTVRRMQLLTTVSLWAAVVTAVAAYFA