; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G014870 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G014870
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionelongator complex protein 2
Genome locationCma_Chr04:7572116..7574322
RNA-Seq ExpressionCmaCh04G014870
SyntenyCmaCh04G014870
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0016573 - histone acetylation (biological process)
GO:0044030 - regulation of DNA methylation (biological process)
GO:1901535 - regulation of DNA demethylation (biological process)
GO:0033588 - Elongator holoenzyme complex (cellular component)
InterPro domainsIPR037289 - Elongator complex protein 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573936.1 Elongator complex protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2383.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

KAG7013001.1 Elongator complex protein 2 [Cucurbita argyrosperma subsp. argyrosperma]1.9e-2383.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

XP_022945012.1 elongator complex protein 2 [Cucurbita moschata]1.9e-2383.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

XP_022968039.1 elongator complex protein 2 [Cucurbita maxima]1.9e-2383.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

XP_023542024.1 elongator complex protein 2 [Cucurbita pepo subsp. pepo]1.9e-2383.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

TrEMBL top hitse value%identityAlignment
A0A0A0KR67 Uncharacterized protein2.1e-2380.88Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEG+DTLETIP+AVP +L EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

A0A5A7SZ72 Elongator complex protein 22.1e-2380.88Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEG+DTLETIP+AVP +L EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

A0A5J5AH87 Uncharacterized protein1.2e-2356.88Show/hide
Query:  TGETPNSASAQILTTLSGHKFH--GLDPAIILFQSGMA---RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMR
        T + P+    Q++  + G      GL    I  Q+      R+GNEGLDTLETIP+A+P VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCC+   
Subjt:  TGETPNSASAQILTTLSGHKFH--GLDPAIILFQSGMA---RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMR

Query:  KLVTSSCKS
        KLV SSCK+
Subjt:  KLVTSSCKS

A0A6J1FZS0 elongator complex protein 29.2e-2483.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

A0A6J1HYF8 elongator complex protein 29.2e-2483.82Show/hide
Query:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        RSGNEGLDTLETIP+AVP VL EPPIE QLAWHTLWPESHKLY  HGNELFSLCCD   KLV SSCK+
Subjt:  RSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

SwissProt top hitse value%identityAlignment
F4I1S7 Elongator complex protein 21.3e-1971.21Show/hide
Query:  GNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        G EGLDT ET+P A P  L EPPIE QLA+HTLWPESHKLY  HGNELFSLC D    LV SSCK+
Subjt:  GNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

Q496Z0 Elongator complex protein 22.9e-0648.08Show/hide
Query:  PDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKSS
        P VL EPP E  L  +TLWPE  KLY  HG E+F + C+  + L+ S+CK++
Subjt:  PDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKSS

Q5EBD9 Elongator complex protein 28.1e-0931.5Show/hide
Query:  PNSASAQILTTLSGHKFHGLDPAIILFQSGMARSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        P  A+   L   +   FHG     IL QS         +    + PN  P  L EPP E  L  +TLWPE  KLY  HG E+F++ C+  + ++ S+CK+
Subjt:  PNSASAQILTTLSGHKFHGLDPAIILFQSGMARSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

Query:  S--------VWHESKRRRVNSAGSCNL
        S        +W  +  +++ S    NL
Subjt:  S--------VWHESKRRRVNSAGSCNL

Q6IA86 Elongator complex protein 21.3e-0646.15Show/hide
Query:  PDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKSS
        P +L EPP E  L  +TLWPE  KLY  HG E+F + C+  + L+ S+CK++
Subjt:  PDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKSS

Q86H45 Probable elongator complex protein 24.4e-0742.03Show/hide
Query:  GNEGLDT--LETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKSS
        G EG+DT   E      P+VL EPP E  L   +LWPE HK Y  HGNE+ ++ C      + S+C++S
Subjt:  GNEGLDT--LETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKSS

Arabidopsis top hitse value%identityAlignment
AT1G49540.1 elongator protein 29.4e-2171.21Show/hide
Query:  GNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        G EGLDT ET+P A P  L EPPIE QLA+HTLWPESHKLY  HGNELFSLC D    LV SSCK+
Subjt:  GNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS

AT1G49540.2 elongator protein 29.4e-2171.21Show/hide
Query:  GNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS
        G EGLDT ET+P A P  L EPPIE QLA+HTLWPESHKLY  HGNELFSLC D    LV SSCK+
Subjt:  GNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSSCKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACTTCCTCTTTCGATTTTCCATAACCGGAGAAACGCCGAACTCCGCTTCTGCACAAATTTTGACGACCCTTTCCGGTCACAAATTTCATGGGCTAGATCCGGCGAT
TATATTATTTCAGTCGGGCATGGCCAGGAGTGGAAATGAAGGTCTTGACACCCTTGAAACCATTCCCAATGCAGTTCCTGACGTTCTTATTGAACCTCCCATTGAACATC
AACTGGCATGGCATACACTTTGGCCAGAGTCGCACAAACTTTATGATGATCATGGGAATGAGCTATTTTCTCTTTGTTGTGACCCCATGAGGAAGCTTGTTACTTCATCC
TGTAAGTCAAGTGTTTGGCATGAAAGCAAACGGAGAAGAGTGAATAGTGCAGGAAGCTGCAACTTGTATCCTGTGGCACGAACCACTGTGTGA
mRNA sequenceShow/hide mRNA sequence
AGGGCATAAAGAGTATACGAGAGGCCCATTGAGCCCAGATCAGCTTCACGTTAGGCCCAAAATAAAACCCATCCTTCCAACTGTTCGGCCCATCTTCGTCCCACCGCGGC
CCTGGTCTTCGGCCGCCATCTCCCCTTCCCCTTCCTCGCCGGAGCTTCCGGCTTCTGGCGGCGGCGACGAGGTGCAACATAATAGCGAACAACGTTTCTTGGGGAGCCTG
TGATTTAGTGGCTTTTGGCGCTCAAAACGCCGTCGCTATCGCTATCGCTATCTTCTCCCCTAAGGTGCGTTAAGTACTACGATGCACTTCCTCTTTCGATTTTCCATAAC
CGGAGAAACGCCGAACTCCGCTTCTGCACAAATTTTGACGACCCTTTCCGGTCACAAATTTCATGGGCTAGATCCGGCGATTATATTATTTCAGTCGGGCATGGCCAGGA
GTGGAAATGAAGGTCTTGACACCCTTGAAACCATTCCCAATGCAGTTCCTGACGTTCTTATTGAACCTCCCATTGAACATCAACTGGCATGGCATACACTTTGGCCAGAG
TCGCACAAACTTTATGATGATCATGGGAATGAGCTATTTTCTCTTTGTTGTGACCCCATGAGGAAGCTTGTTACTTCATCCTGTAAGTCAAGTGTTTGGCATGAAAGCAA
ACGGAGAAGAGTGAATAGTGCAGGAAGCTGCAACTTGTATCCTGTGGCACGAACCACTGTGTGA
Protein sequenceShow/hide protein sequence
MHFLFRFSITGETPNSASAQILTTLSGHKFHGLDPAIILFQSGMARSGNEGLDTLETIPNAVPDVLIEPPIEHQLAWHTLWPESHKLYDDHGNELFSLCCDPMRKLVTSS
CKSSVWHESKRRRVNSAGSCNLYPVARTTV