CuGenDBv2

Gene ID	CmaCh04G016070
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic
Genome location	Cma_Chr04:8112623..8116399
RNA-Seq Expression	CmaCh04G016070
Synteny	CmaCh04G016070
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process) GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044705 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7032167.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-162

98.67

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSKNND VRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGF-AAESAEGDGEAEHVEA
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGF AAESAEGDGEAEHVEA
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGF-AAESAEGDGEAEHVEA

Query:  SKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG
        SKLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG
Subjt:  SKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRG

Query:  D
        D
Subjt:  D

XP_022956789.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita moschata]

2.4e-164

99.33

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Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

XP_022984820.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita maxima]

9.6e-166

100

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Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

XP_023513804.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic [Cucurbita pepo subsp. pepo]

7.6e-163

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Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLV+VYDGMCIFQVGFAAESAEGDG+ EHVEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

XP_038892078.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1 [Benincasa hispida]

3.3e-150

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Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSS+ K T CPVRRSFPRIIR SS  SQ SYRGPKPSRDWVA+WVSKN+DAVRSLPIYVGGISLL+VLFNR VSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVL GLVWLSI+PKSITPVNPQGV CERICSSLPD+V SELLWVW SLSEVTCCRSLVVVYDG CIFQVGFAAESAEGDGEAEHVEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LY G LKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QP AKLSS+G+
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BFC6 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

1.0e-141

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPS D VA+WVS N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVL GLVWLSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI QVGFAAE AEGDGEAE VEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGLLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

A0A5A7ST12 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4

1.0e-141

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Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFF VTPI W+S+ K T   +RRSFPRIIRASS  SQ SYRGPKPS D VA+WVS N+D VRS PIYVGGISLL+VLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVL GLVWLSIRPKSITPVNP GVE E ICSSLPD VTSELLWVWKSLSEVTCCRSLVVVYDG CI QVGFAAE AEGDGEAE VEA 
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGLLYKG+LKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAI+GGNTIRGFTTSDQAWISLVGEKLDATLLKYSNN QPAAKLSS G+
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

A0A6J1DCN6 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic isoform X1

3.8e-144

84.52

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIA
        MEAGIFF V PILWS + KC LCPVRRSFPRIIRASS +S +S          YRGPKP+RDWVA+WV++N+DAVRSLPI+VGGISLLVVLFNRAVSGIA
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQAS----------YRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIA

Query:  PVADASSSQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEG
        PVADASSSQSRADLLTLGLAVTNVL GLVWLSIRPKSITPVN QGV C+R+CSSLPDLVT ELLWVW+SLSEVTCCRSLVVVYDGMC+FQVGFAAES EG
Subjt:  PVADASSSQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEG

Query:  DGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ
        DGEAEHV+AS+LMQG LY+GI KS+AQSYLANLSLYPGKSELPFLPSNTQAVILQPLG+KGIA+IGGNTIRGFTTSDQAWISLVGEKLDATL KYSNN Q
Subjt:  DGEAEHVEASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQ

Query:  PAAKLSSRGD
        PA KLSS G+
Subjt:  PAAKLSSRGD

A0A6J1H029 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

1.1e-164

99.33

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPS DWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQG LYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

A0A6J1J9M5 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

4.7e-166

100

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
        MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQS

Query:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
        RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS
Subjt:  RADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEAS

Query:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
        KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD
Subjt:  KLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

SwissProt top hits

e value

%identity

Alignment

Q6NQK9 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB4, chloroplastic

3.2e-103

67.36

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS
        MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP ++ VA+++SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS

Query:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV
        SQSRADLL LGLAVTN+LTGLVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C+ Q+G  AES E D +   V
Subjt:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV

Query:  EASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY
        +  KLMQG +Y+G++KS+AQSYLANLSLYPG+SELPFLP+NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Subjt:  EASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY

Arabidopsis top hits

e value

%identity

Alignment

AT1G59840.1 cofactor assembly of complex C

2.3e-104

67.36

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS
        MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP ++ VA+++SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS

Query:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV
        SQSRADLL LGLAVTN+LTGLVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C+ Q+G  AES E D +   V
Subjt:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV

Query:  EASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY
        +  KLMQG +Y+G++KS+AQSYLANLSLYPG+SELPFLP+NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Subjt:  EASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY

AT1G59840.2 cofactor assembly of complex C

2.3e-104

67.36

Show/hide

Query:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS
        MEA I      I WS++ + +  P+   FPR IRASS ++     +Y GPKP ++ VA+++SKN+D VRSLPIYVGG SLL VLFNR VSGIAPVADASS
Subjt:  MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQ---ASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASS

Query:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV
        SQSRADLL LGLAVTN+LTGLVWLSIRPKSITPVNP+GVEC+ + S LP  + SELLW W+SL   TCC+SLV+VY+G+C+ Q+G  AES E D +   V
Subjt:  SQSRADLLTLGLAVTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHV

Query:  EASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY
        +  KLMQG +Y+G++KS+AQSYLANLSLYPG+SELPFLP+NTQAVILQPLG+KGIA+IGGNTIRGFT+SDQAWIS +GEKLDATL +Y
Subjt:  EASKLMQGLLYKGILKSQAQSYLANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCGGGAATTTTCTTCCCCGTCACTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTC
CTTGAATTCGCAAGCAAGTTACAGAGGGCCGAAGCCTTCAAGGGATTGGGTAGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTG
GAATTTCTCTATTGGTCGTCCTCTTTAACCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCC
GTCACAAATGTCTTGACTGGGCTGGTGTGGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGA
TCTTGTAACATCCGAGTTGCTATGGGTATGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTG
CTGCTGAATCAGCTGAGGGTGATGGGGAGGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGATTGCTCTACAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTG
GCCAATCTTTCTCTTTATCCAGGGAAGTCGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAAAAGGGTATTGCTATAATTGGTGG
CAACACTATCAGGGGTTTCACAACCTCTGATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAA
AATTGAGCTCAAGAGGGGACTGA

mRNA sequence

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CGTTCCCCCCAGGTTGGAGTCCAAATCCCGGCAAATTATCCTTACGGACTTTATTTTTGAAGTATCAATTTACTCGGTTCCGATGGAAGCGGGAATTTTCTTCCCCGTCA
CTCCAATTCTATGGAGTTCTAGTTTGAAGTGCACTCTCTGTCCCGTTCGTCGCTCTTTCCCGCGTATCATAAGGGCTTCTTCCTTGAATTCGCAAGCAAGTTACAGAGGG
CCGAAGCCTTCAAGGGATTGGGTAGCCGAATGGGTATCCAAGAACAACGATGCCGTTCGGAGTTTGCCCATTTACGTCGGTGGAATTTCTCTATTGGTCGTCCTCTTTAA
CCGCGCCGTTTCAGGCATTGCTCCCGTCGCCGATGCCAGCAGTTCACAGTCAAGAGCTGATCTATTAACCCTTGGACTAGCCGTCACAAATGTCTTGACTGGGCTGGTGT
GGCTGTCGATCAGGCCGAAATCTATAACACCGGTAAATCCACAAGGAGTAGAATGTGAGAGGATATGCTCCAGTCTCCCTGATCTTGTAACATCCGAGTTGCTATGGGTA
TGGAAGTCTCTGTCAGAAGTGACATGCTGCAGGTCTCTGGTTGTTGTCTACGATGGTATGTGTATATTTCAAGTTGGTTTTGCTGCTGAATCAGCTGAGGGTGATGGGGA
GGCCGAACATGTTGAAGCTAGTAAACTGATGCAGGGATTGCTCTACAAGGGAATTCTCAAATCCCAAGCTCAGAGCTACTTGGCCAATCTTTCTCTTTATCCAGGGAAGT
CGGAGCTGCCATTTCTTCCCTCAAATACTCAGGCTGTAATCTTGCAACCACTTGGGGAAAAGGGTATTGCTATAATTGGTGGCAACACTATCAGGGGTTTCACAACCTCT
GATCAGGCATGGATTTCACTAGTTGGAGAGAAGCTGGATGCTACGCTGTTGAAATATTCAAATAATTTGCAACCAGCGGCAAAATTGAGCTCAAGAGGGGACTGA

Protein sequence

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MEAGIFFPVTPILWSSSLKCTLCPVRRSFPRIIRASSLNSQASYRGPKPSRDWVAEWVSKNNDAVRSLPIYVGGISLLVVLFNRAVSGIAPVADASSSQSRADLLTLGLA
VTNVLTGLVWLSIRPKSITPVNPQGVECERICSSLPDLVTSELLWVWKSLSEVTCCRSLVVVYDGMCIFQVGFAAESAEGDGEAEHVEASKLMQGLLYKGILKSQAQSYL
ANLSLYPGKSELPFLPSNTQAVILQPLGEKGIAIIGGNTIRGFTTSDQAWISLVGEKLDATLLKYSNNLQPAAKLSSRGD

CmaCh04G016070 (gene) of Cucurbita maxima (Rimu) v1.1 genome