; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G016440 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G016440
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionbinding partner of ACD11 1-like
Genome locationCma_Chr04:8294767..8298562
RNA-Seq ExpressionCmaCh04G016440
SyntenyCmaCh04G016440
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034360 - Vip1-like, RNA recognition motif, plant
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601420.1 Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-12898.77Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        MSPGGYTVEVTGLSPKAEEKDVLDFFAFCG IELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
        ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMD+KYHVLQTTKSAISATGR
Subjt:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR

Query:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        TAAAAADTVVQSGYFSRGALFVSD LNRAAKVAADLGSRGVEH
Subjt:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

XP_004135186.1 binding partner of ACD11 1 [Cucumis sativus]1.5e-11690.16Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAG+EAVK++DEKYHVL+TTKSAISATG
Subjt:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        RTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSRG+EH
Subjt:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

XP_022957393.1 binding partner of ACD11 1-like [Cucurbita moschata]5.3e-13099.59Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
        ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMD+KYHVLQTTKSAISATGR
Subjt:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR

Query:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
Subjt:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

XP_022988849.1 binding partner of ACD11 1-like [Cucurbita maxima]2.4e-130100Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
        ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
Subjt:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR

Query:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
Subjt:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

XP_038892042.1 binding partner of ACD11 1 [Benincasa hispida]2.3e-11790.98Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        M+PGGYTVEVTGLSPKA EKDVLDFFAF G I+LVEIIRSG+DACTAYVTFKDAYSQETACLLSGA I+DQRVCITRWG+FDDEFGFWSR SG+HEEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK  DESHQVS TAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG
Subjt:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        +TAAAAADTVV+S YFSRGALF+SDALNRAAKVAADLGSRG+EH
Subjt:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

TrEMBL top hitse value%identityAlignment
A0A0A0KSM6 RRM domain-containing protein7.2e-11790.16Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSGEDACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD LTKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAG+EAVK++DEKYHVL+TTKSAISATG
Subjt:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        RTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSRG+EH
Subjt:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

A0A1S3BET5 binding partner of ACD11 12.7e-11689.75Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSG+DACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD  TKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAGFEAVK++DEKYHVL+TTKSAISATG
Subjt:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        RTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSRG+EH
Subjt:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

A0A5D3CVI0 Binding partner of ACD11 12.7e-11689.75Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        M+PGGYTVEVTGLSP A EKDVLDFFAF G IELVEI+RSG+DACTAYVTFKDAYSQETACLLSGA IVDQRVCITRWGHFDDEFGFWSRP G+ EEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG
         ASAQRSQFISSAGNAVTMAQEVVKTML+MGYVLGKD  TKAK FDESHQVSATAAAKVADLSHRIGLTDM+GAGFEAVK++DEKYHVL+TTKSAISATG
Subjt:  -ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        RTAAAAADTVV+S YFSRGALF+SDALNRAAK AADLGSRG+EH
Subjt:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

A0A6J1H035 binding partner of ACD11 1-like2.6e-13099.59Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
        ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMD+KYHVLQTTKSAISATGR
Subjt:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR

Query:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
Subjt:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

A0A6J1JE77 binding partner of ACD11 1-like1.1e-130100Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
        ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR
Subjt:  ASAQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGR

Query:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
        TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH
Subjt:  TAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVEH

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.4e-0826.6Show/hide
Query:  VEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQ
        V VT +SP+  EK + DFF+FCG +  +   +SGE   TA + F+   + +TA LL  A +   ++ IT                    ED  A++   Q
Subjt:  VEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQ

Query:  FISSAGNAVTMAQE------VVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQ
            AG      QE      ++  +LS GY L    L K+   D+S+ VS+                 ++ +    V++++E+YHV +
Subjt:  FISSAGNAVTMAQE------VVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQ

Q9LFD5 Binding partner of ACD11 11.4e-3237.08Show/hide
Query:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS
        +V+V  LS  A E D+ +FF+F G +E ++ I+S E   +AYVTFK+    ETA LLSGA+I DQ V I    ++       S P+  H E  ++ A+  
Subjt:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS

Query:  QFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMDEKYHVLQTTKSAISATGRTA
               + V  A++VV +ML+ G++LGKDA+ KAK FDE H  ++TA A VA L  +IGL+  + AG     E +K +D+ + V + TKS  +A  +T 
Subjt:  QFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE
        ++A   V+++ Y   G  + + A NR A+ A ++G +  E
Subjt:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE

Arabidopsis top hitse value%identityAlignment
AT1G14340.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-7864.71Show/hide
Query:  GYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPS-GYHEE-DSTAS
        GY VEVTGLSP     D++DFF+F G I+ ++I+RSGE ACTAYV FKD+YSQETA LL+GATI+DQRVCITRWG   +EF FW+  S G+ +E DS   
Subjt:  GYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPS-GYHEE-DSTAS

Query:  AQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGRTA
        AQRS+F  +AG AVT AQEVVK ML+ G+VLGKDAL+KAK FDESH VSA A A+V+ L  RIGLTD I  G EAV+  D++YHV  T KSA+ ATGRTA
Subjt:  AQRSQFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG
        AAAA +VV S YFS GAL++S AL RAAK A+DLG+RG
Subjt:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG

AT3G01210.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-5550.79Show/hide
Query:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST
        M P GY  +VT LSP+A EKDV  FF+ CG +ELVEI     DA TAYVTF+DAY+ + A LLSGATIVDQ V I+ +G +  E       +   EED +
Subjt:  MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDST

Query:  ASAQRSQ-FISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAI----
         +  RS  F SS G A+T+AQ+VV+TML+ GYVL KDA+ KAK  DES + S+  A K+A++SH +GLT  I +  E V++ DEKYH    TKSA+    
Subjt:  ASAQRSQ-FISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAI----

Query:  -------SATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG
               + TG+ AAAAA +VV S YF+ GAL+ SDAL RAAK AA +G  G
Subjt:  -------SATGRTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRG

AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.8e-3639.09Show/hide
Query:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS
        TV+V+ +S  A ++D+ +FF+F G I  +E     E    AYVTFKD    ETA LLSGATIVD  V ++              P      ++ AS +  
Subjt:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS

Query:  QFISS--AGNAV-TMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMDEKYHVLQTTKSAISATG
            S  AG++V   A++VV +ML+ G++LGKDA+ KAK+ DE HQ+++TA+AKVA    +IG TD I  G     E V+ +D+KY V + TKSAI+A  
Subjt:  QFISS--AGNAV-TMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMDEKYHVLQTTKSAISATG

Query:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE
        +T + A   ++++ Y   GA +V+ A N+ AK A ++G +  E
Subjt:  RTAAAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE

AT5G16840.2 binding partner of acd11 11.5e-3437.08Show/hide
Query:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS
        +V+V  LS  A E D+ +FF+F G +E ++I  S E   +AYVTFK+    ETA LLSGA+I DQ V I    ++       S P+  H E  ++ A+  
Subjt:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS

Query:  QFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMDEKYHVLQTTKSAISATGRTA
               + V  A++VV +ML+ G++LGKDA+ KAK FDE H  ++TA A VA L  +IGL+  + AG     E +K +D+ + V + TKS  +A  +T 
Subjt:  QFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGF----EAVKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE
        ++A   V+++ Y   G  + + A NR A+ A ++G +  E
Subjt:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-3637.08Show/hide
Query:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS
        TV+V+ +S +A E+D+ +FF+F G I  +E     + +  AYVTFKD    ETA LL+G+TIVD  V +T    +       +      E + ++S  R 
Subjt:  TVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRS

Query:  QFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAG----FEAVKTMDEKYHVLQTTKSAISATGRTA
               +    A++VV  M+S G+VLGKDA+ KAK+ DE HQ+++TA+A+V     RIG T+ I  G     E VK +D+K+ V + TKSAI+A  +T 
Subjt:  QFISSAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAG----FEAVKTMDEKYHVLQTTKSAISATGRTA

Query:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE
        + A   ++++ Y   GA +V+ A NR +K A ++G +  E
Subjt:  AAAADTVVQSGYFSRGALFVSDALNRAAKVAADLGSRGVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCCCGGTGGTTATACGGTCGAAGTGACGGGCTTGTCTCCTAAAGCCGAAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTGTGGCCCAATCGAGCTCGTTGAGAT
TATTAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTACTGAGTGGTGCAACAATTGTAGATCAACGAGTGT
GCATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTCTGGAGTAGGCCTTCCGGTTACCATGAAGAAGACAGTACTGCTTCGGCACAAAGAAGTCAGTTTATTTCC
AGCGCTGGTAACGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGTCCATGGGTTACGTGCTGGGCAAAGATGCATTAACCAAAGCCAAAACCTTTGATGAATC
TCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGTCTAACTGACATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGAGA
AGTACCACGTATTGCAGACCACCAAATCAGCTATATCTGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTCCAAAGTGGCTACTTCTCTAGGGGAGCTCTT
TTCGTGTCGGATGCCCTGAATCGAGCAGCCAAAGTTGCTGCTGACTTGGGTAGTCGTGGTGTTGAGCATTAA
mRNA sequenceShow/hide mRNA sequence
TCTAGTTTTTCTTCTGAGATTTCGTCCTCTGAAACTCCACTTGCTCGTCTCCTCTGCAAGTTTTATATTTCGTCGAAAGAATAGGCGAATCAAGTTTGCTGCGTGAATAT
GAGCCCCGGTGGTTATACGGTCGAAGTGACGGGCTTGTCTCCTAAAGCCGAAGAGAAAGATGTCCTCGATTTCTTCGCTTTCTGTGGCCCAATCGAGCTCGTTGAGATTA
TTAGATCTGGTGAAGATGCCTGCACTGCCTATGTGACATTCAAAGATGCTTATTCTCAAGAGACTGCTTGCTTACTGAGTGGTGCAACAATTGTAGATCAACGAGTGTGC
ATAACACGGTGGGGACATTTTGATGATGAATTTGGTTTCTGGAGTAGGCCTTCCGGTTACCATGAAGAAGACAGTACTGCTTCGGCACAAAGAAGTCAGTTTATTTCCAG
CGCTGGTAACGCAGTGACCATGGCCCAGGAAGTAGTCAAAACCATGCTGTCCATGGGTTACGTGCTGGGCAAAGATGCATTAACCAAAGCCAAAACCTTTGATGAATCTC
ATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCAGATTTGAGTCATAGAATTGGTCTAACTGACATGATAGGTGCGGGTTTTGAAGCAGTTAAAACCATGGATGAGAAG
TACCACGTATTGCAGACCACCAAATCAGCTATATCTGCCACAGGAAGAACAGCTGCTGCCGCTGCCGATACCGTGGTCCAAAGTGGCTACTTCTCTAGGGGAGCTCTTTT
CGTGTCGGATGCCCTGAATCGAGCAGCCAAAGTTGCTGCTGACTTGGGTAGTCGTGGTGTTGAGCATTAATGGATTGTTGATTGTCTAACTGGGAGGCCATATGGATGTC
TGCTTGATTCGGGCGCAACAAGAATGAAGTCCCGCATGCAATTTCGTGATGTTGCCGCCTTGGATAGTTTCTTCCAGCTGTAATTGTCCGAGGCTTGCAACTCGCTCCAG
CAGGCAATAGCTCCCTGCAAGTTACAGGTCGGTATGCTCTTCAATTTTCTGCTGTGGACTGTGGACTGTGGTTTCATCAAGTAGACATCGAACATGCAATTGTATTATAT
GATTCTTGGCATTTAGGCAACACGAGGGACAAACTCGAATGTTATATCTAAGCTGTTAATTAATCGATCAAGTCTCGGCCATAACATTTGAATCATGCATTGCACAATAT
TCCCACACACCGTGGCTGTATTGTCGTGGTCGGAATCGATCACATCATCTGCTGCAAGTACATAAATAGTTTCAATAGAAATGATCATGGACCCTTCTTTATTAAAAAGC
ATCTTCCCT
Protein sequenceShow/hide protein sequence
MSPGGYTVEVTGLSPKAEEKDVLDFFAFCGPIELVEIIRSGEDACTAYVTFKDAYSQETACLLSGATIVDQRVCITRWGHFDDEFGFWSRPSGYHEEDSTASAQRSQFIS
SAGNAVTMAQEVVKTMLSMGYVLGKDALTKAKTFDESHQVSATAAAKVADLSHRIGLTDMIGAGFEAVKTMDEKYHVLQTTKSAISATGRTAAAAADTVVQSGYFSRGAL
FVSDALNRAAKVAADLGSRGVEH