; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G017740 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G017740
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRING-type domain-containing protein
Genome locationCma_Chr04:8919039..8920588
RNA-Seq ExpressionCmaCh04G017740
SyntenyCmaCh04G017740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601543.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]6.9e-5096.33Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE DWENGRERRISITQFKSLGQSFNNGGTEKGSASRC+MAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG

Query:  FEADEEHPE
        FEADEE  E
Subjt:  FEADEEHPE

XP_022957080.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]3.2e-5584.25Show/hide
Query:  FFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERR
        F  FSSFSSATQ K      L F      ++ CGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE DWENGRERR
Subjt:  FFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERR

Query:  ISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE
        ISITQFKSLGQSFNNGGTEKGSASRC+MAECCVCLCGFEADEE  E
Subjt:  ISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE

XP_022984317.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]7.3e-7698.68Show/hide
Query:  MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWEN
        MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWEN
Subjt:  MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWEN

Query:  GRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE
        GRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEE  E
Subjt:  GRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE

XP_023523084.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]4.0e-5097.25Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRC MAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG

Query:  FEADEEHPE
        FEADEE  E
Subjt:  FEADEEHPE

XP_038892017.1 probable E3 ubiquitin-protein ligase XERICO [Benincasa hispida]6.2e-4388.07Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWENGRERRISITQFKSLGQSFN  G  + S SRC+MAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG

Query:  FEADEEHPE
        FEADEE  E
Subjt:  FEADEEHPE

TrEMBL top hitse value%identityAlignment
A0A0A0KTI8 RING-type domain-containing protein1.7e-4186.24Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWEN RERRISITQFK+LGQSF NG TE+   SRC+MAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG

Query:  FEADEEHPE
        FEADEE  E
Subjt:  FEADEEHPE

A0A5A7SYA9 Putative E3 ubiquitin-protein ligase XERICO7.4e-4286.24Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE+DWENGRERRISITQFK+LGQSF NG TE+   SRC+MAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCG

Query:  FEADEEHPE
        FEADEE  E
Subjt:  FEADEEHPE

A0A6J1DFU2 probable E3 ubiquitin-protein ligase XERICO1.8e-4086.49Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASG--NPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCL
        MGLSNFPP AEGVLLLPVL+MNTVMSMAFLK+LVRSVIQMMSASG  +PSSSEEE+D EN RERRISITQFKSL QSF NGGTE GSASRCI AECCVCL
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASG--NPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCL

Query:  CGFEADEEHPE
        CGFEADEE  E
Subjt:  CGFEADEEHPE

A0A6J1GZI7 probable E3 ubiquitin-protein ligase XERICO1.5e-5584.25Show/hide
Query:  FFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERR
        F  FSSFSSATQ K      L F      ++ CGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE DWENGRERR
Subjt:  FFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERR

Query:  ISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE
        ISITQFKSLGQSFNNGGTEKGSASRC+MAECCVCLCGFEADEE  E
Subjt:  ISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE

A0A6J1J1V9 probable E3 ubiquitin-protein ligase XERICO3.5e-7698.68Show/hide
Query:  MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWEN
        MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWEN
Subjt:  MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWEN

Query:  GRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE
        GRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEE  E
Subjt:  GRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein6.1e-1244.94Show/hide
Query:  MNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE
        MNTV+S+  LKN+VRSV Q++++    S   ++   ++   RRISITQFKSL ++      EKG        ECCVCLCGF+ +EE  E
Subjt:  MNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPE

AT1G67856.1 RING/U-box superfamily protein4.8e-1745.05Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPS-SSEEEFDWENG-RERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCL
        MG+S++P ++EGV  +P+LVMNTV+S++ +KN+VRSV+ M+S+  N + + E++ D E+  R RRISIT F+SL ++       +GS +     +CCVCL
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPS-SSEEEFDWENG-RERRISITQFKSLGQSFNNGGTEKGSASRCIMAECCVCL

Query:  CGFEADEEHPE
        CGF+ +EE  E
Subjt:  CGFEADEEHPE

AT2G04240.1 RING/U-box superfamily protein6.1e-0430.77Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRIS------ITQFKSLGQSFNNGGTEKGSASRCIMA--
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S +PSSS       +      S      + Q +S  + F N        S C     
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRIS------ITQFKSLGQSFNNGGTEKGSASRCIMA--

Query:  ---ECCVCLCGFEADEE
           EC VCL  F+ D E
Subjt:  ---ECCVCLCGFEADEE

AT2G04240.2 RING/U-box superfamily protein6.1e-0430.77Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRIS------ITQFKSLGQSFNNGGTEKGSASRCIMA--
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S +PSSS       +      S      + Q +S  + F N        S C     
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRIS------ITQFKSLGQSFNNGGTEKGSASRCIMA--

Query:  ---ECCVCLCGFEADEE
           EC VCL  F+ D E
Subjt:  ---ECCVCLCGFEADEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAAAACCTATTTCTTCTTTTTCTCTTCGTTTTCTTCTGCAACTCAAGGCAAAACCCTGAAACGGATTAGACTTCATTTTGGGAGGAAAGAAAAAAGCTTCAAATT
TTGTGGATTTTTGAAGATGGGTCTCTCGAATTTCCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCTGTTCTTGTGATGAACACTGTAATGTCGATGGCGTTTTTGAAGA
ACTTGGTGAGATCTGTGATACAAATGATGAGTGCGAGTGGGAATCCTTCGAGTTCTGAGGAAGAATTCGACTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACCCAG
TTCAAATCTTTGGGTCAAAGCTTCAATAATGGCGGAACAGAGAAGGGCTCTGCTTCGAGGTGTATCATGGCAGAGTGCTGTGTTTGTCTTTGTGGGTTTGAAGCTGATGA
GGAACACCCAGAAGATCAATTTAGAATTCAAAAGGATTCATCAGCAAAAGCTAAGAACACAGAGCTAAGAACAGTTAAAGCAGGGAGCTTTAAATGGCTTGGAGCAGCTG
GGCAGTCACAAAACTGGCAATTCCAATGTGTGGGACTCTGTTCTTCAGTGAGAAATCTAGTTCAGAAGTCATTCAACACAAGAAATGAACCAGGAGCTAACAGTTTCTTT
CAGCTAGCTAACAGTTTATTACAGAACCAGAAGACAGAACGAGATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCAAAACCTATTTCTTCTTTTTCTCTTCGTTTTCTTCTGCAACTCAAGGCAAAACCCTGAAACGGATTAGACTTCATTTTGGGAGGAAAGAAAAAAGCTTCAAATT
TTGTGGATTTTTGAAGATGGGTCTCTCGAATTTCCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCTGTTCTTGTGATGAACACTGTAATGTCGATGGCGTTTTTGAAGA
ACTTGGTGAGATCTGTGATACAAATGATGAGTGCGAGTGGGAATCCTTCGAGTTCTGAGGAAGAATTCGACTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACCCAG
TTCAAATCTTTGGGTCAAAGCTTCAATAATGGCGGAACAGAGAAGGGCTCTGCTTCGAGGTGTATCATGGCAGAGTGCTGTGTTTGTCTTTGTGGGTTTGAAGCTGATGA
GGAACACCCAGAAGATCAATTTAGAATTCAAAAGGATTCATCAGCAAAAGCTAAGAACACAGAGCTAAGAACAGTTAAAGCAGGGAGCTTTAAATGGCTTGGAGCAGCTG
GGCAGTCACAAAACTGGCAATTCCAATGTGTGGGACTCTGTTCTTCAGTGAGAAATCTAGTTCAGAAGTCATTCAACACAAGAAATGAACCAGGAGCTAACAGTTTCTTT
CAGCTAGCTAACAGTTTATTACAGAACCAGAAGACAGAACGAGATCAATAG
Protein sequenceShow/hide protein sequence
MPKTYFFFFSSFSSATQGKTLKRIRLHFGRKEKSFKFCGFLKMGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEEFDWENGRERRISITQ
FKSLGQSFNNGGTEKGSASRCIMAECCVCLCGFEADEEHPEDQFRIQKDSSAKAKNTELRTVKAGSFKWLGAAGQSQNWQFQCVGLCSSVRNLVQKSFNTRNEPGANSFF
QLANSLLQNQKTERDQ