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CmaCh04G018160 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G018160
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionAa_trans domain-containing protein
Genome locationCma_Chr04:9152170..9152584
RNA-Seq ExpressionCmaCh04G018160
SyntenyCmaCh04G018160
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7096194.1 hypothetical protein CFC21_098178, partial [Triticum aestivum]5.8e-0447.27Show/hide
Query:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLM
        P+ HVA  +QAQKI+P+M H+LGLH      D PVA+RR +  H   Q++ +LL+
Subjt:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLM

KAF9673691.1 hypothetical protein SADUNF_Sadunf10G0050500 [Salix dunnii]6.8e-0544.07Show/hide
Query:  APMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI
        AP+HHVA  +Q Q+++ ++D +LGLHC  +  D  VAH   +  +P+ Q L VLLM++I
Subjt:  APMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI

KAF9847733.1 hypothetical protein H0E87_022112 [Populus deltoides]8.9e-0541.54Show/hide
Query:  MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNM
        +T ++  AP+ HVA  +Q +++R ++D KLGL     S D  V H  P+  HP+SQ L +LLMN+
Subjt:  MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNM

KAG6512448.1 hypothetical protein ZIOFF_030559 [Zingiber officinale]1.8e-0552.63Show/hide
Query:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNM
        P+HHVA+ +QAQK+R I+D KL LHC    ADG  A+ R E  H   +ELPVLL+++
Subjt:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNM

TKR83890.1 hypothetical protein D5086_0000266610 [Populus alba]3.1e-0540.91Show/hide
Query:  MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI
        +T ++  AP+HHVA  +Q ++++ ++D KLGL     S D  V H  P+  HP+SQ L +LLMN++
Subjt:  MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI

TrEMBL top hitse value%identityAlignment
A0A287WX91 Aa_trans domain-containing protein2.8e-0442.47Show/hide
Query:  MHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI--------TARTQPVC
        +HHVA  +QAQKI+P+M ++LGLH      D PVA+RR +  H   Q++ VLL++          TAR Q  C
Subjt:  MHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI--------TARTQPVC

A0A3B6RGD3 Aa_trans domain-containing protein2.8e-0447.27Show/hide
Query:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLM
        P+ HVA  +QAQKI+P+M H+LGLH      D PVA+RR +  H   Q++ +LL+
Subjt:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLM

A0A453S108 Aa_trans domain-containing protein3.3e-0548.28Show/hide
Query:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI
        P++HVA  +QAQKI+P+M H+LGLH      D PVA+RR +  H   Q++ VLL++ I
Subjt:  PMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI

A0A4U5NMD0 Aa_trans domain-containing protein1.5e-0540.91Show/hide
Query:  MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI
        +T ++  AP+HHVA  +Q ++++ ++D KLGL     S D  V H  P+  HP+SQ L +LLMN++
Subjt:  MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMI

A0A6N2MWP8 Aa_trans domain-containing protein1.3e-0444.64Show/hide
Query:  MHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNM
        +HHVA  +Q Q+++ ++D +LGLHC  +  D  VAH   +  HP SQ L VLLM++
Subjt:  MHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTATTCTTTACGTGCAGCTCCCATGCATCATGTGGCTAGCGATATACAAGCCCAAAAGATTCGGCCTATCATGGACCACAAATTGGGTTTGCATTGTGTT
CGGCATTCTGCTGATGGTCCTGTCGCCCATCGGCGGCCTGAGAACGCTCATCCTTTCAGCCAAGAACTACCAGTTCTTCTCATGAACATGATCACAGCAAGAACC
CAACCAGTTTGTACTTCAATAGGAGCTCAAGAAACGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCTATTCTTTACGTGCAGCTCCCATGCATCATGTGGCTAGCGATATACAAGCCCAAAAGATTCGGCCTATCATGGACCACAAATTGGGTTTGCATTGTGTT
CGGCATTCTGCTGATGGTCCTGTCGCCCATCGGCGGCCTGAGAACGCTCATCCTTTCAGCCAAGAACTACCAGTTCTTCTCATGAACATGATCACAGCAAGAACC
CAACCAGTTTGTACTTCAATAGGAGCTCAAGAAACGTAA
Protein sequenceShow/hide protein sequence
MTYSLRAAPMHHVASDIQAQKIRPIMDHKLGLHCVRHSADGPVAHRRPENAHPFSQELPVLLMNMITARTQPVCTSIGAQET