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CmaCh04G018240 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G018240
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionProteasome subunit beta
Genome locationCma_Chr04:9201497..9205674
RNA-Seq ExpressionCmaCh04G018240
SyntenyCmaCh04G018240
Gene Ontology termsGO:0051603 - proteolysis involved in cellular protein catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0005839 - proteasome core complex (cellular component)
GO:0004298 - threonine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032353.1 hypothetical protein SDJN02_06398, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-0496.15Show/hide
Query:  ATGTIYQLKKLLNCLEEQFIMQHSET
        ATGTIY+LKKLLNCLEEQFIMQHSET
Subjt:  ATGTIYQLKKLLNCLEEQFIMQHSET
XP_022944784.1 proteasome subunit beta type-5-like [Cucurbita moschata]5.1e-0465.79Show/hide
Query:  MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISA
        MK+DT+GLESA +FSG++ST+LLDGLS++ SFD+P +A
Subjt:  MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISA
TrEMBL top hitse value%identityAlignment
A0A6J1FZ24 Proteasome subunit beta2.5e-0465.79Show/hide
Query:  MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISA
        MK+DT+GLESA +FSG++ST+LLDGLS++ SFD+P +A
Subjt:  MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISA
A0A6J1HQU8 Proteasome subunit beta9.4e-0463.16Show/hide
Query:  MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISA
        MK+DT+GLESA +FSG++ST+LL+GLS++ SFD+P +A
Subjt:  MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGGACACTACCGGTCTTGAATCAGCCAATTTTTTCTCTGGGACGGCTAGTACTAAGCTACTCGATGGTTTATCCTCGATGACGTCTTTTGATATTCCAATTTC
TGCTTATGCCGTGGATACCGATCAAGTCGATGAAGAAAGAAATTATGTTCGGGATGGTGCTACCGGTACGATTTATCAGTTGAAGAAGCTGCTGAACTGTCTAGAAGAGC
AATTTATCATGCAACATTCTGAGACGAGTCTCAGGAACAATCATTTTATCGTACTGTTGAGGTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGATGGACACTACCGGTCTTGAATCAGCCAATTTTTTCTCTGGGACGGCTAGTACTAAGCTACTCGATGGTTTATCCTCGATGACGTCTTTTGATATTCCAATTTC
TGCTTATGCCGTGGATACCGATCAAGTCGATGAAGAAAGAAATTATGTTCGGGATGGTGCTACCGGTACGATTTATCAGTTGAAGAAGCTGCTGAACTGTCTAGAAGAGC
AATTTATCATGCAACATTCTGAGACGAGTCTCAGGAACAATCATTTTATCGTACTGTTGAGGTCTTGAGGACTCATAAAATAGGGACTTGGAGGTAATTTTCTTGAACTT
TTGAAGAAATTGAAAGTTTAGAATTATTGATTAATTTTGCGGTTTCATAACTACTCCTCTTACCACATGACGATTACCTAGCCAATGTTTAGATTTGTCTTTATTCAAAC
TTTTTTTGTTTACCCTAGCATTCTCCACTGGTTCGATTGTTGTTGAGCAATTTTTGGATGTCAATCAGACCTCTCCTTCGTCAAAAATGATCCGCTTATCCCGAAATGAC
CTAGCCCAATAGGAAAATCTCAATTCATTGGACTTTTTGATACAATCAAATAGAAAGTCTCAAGGGCGTCATATTCTAAGAGCCCAAACTATGTGGTTGAATAAATCCTC
CTCTATCTGTTGCGGGTCGAGGACTCCTCCTTCCCCTTCTTCAAACTTTGATTCGTATTATTCATAGAGAAATCTCTGATCAACGATAGAACAAGATCCATTTTGTATCA
TCTTTAGGAATCGTTCGAGCCGAAAAAGTAATGTCACTCGATCATTACCAAATCGACTGCAATCTTTTTCTGTCCGTGATGATCTCAATCCCAACAGAGCACTTTCTACT
TCTAATAAGCCATGAACTAGATCAAGAATCATTCTCAACAAGTCCATTTAATATAGCTAATGTACCCTCTTTTATAATCAGTTTTGCTACCGTACTTGCTGAGAACTTAG
ATTTTTTTTCGTACTTTAGAATGGATACACAACTTTTTTTTTTGCAAGGTTGATAATGACCCATATTTTAGATGATATTTTGAGAAGATTAGTTCTTTGAAATATGGTTT
ACTCAAATAGCTGGAATGATTGTTTAAAACATTAATTTAGAGAGGAAGTGTTGAATAAATGGTATTACTATGTTGGATAAAAGGAATTGCGAGTGTTTATATGATTTGGG
GAATGCCCCATTAAGGAGTATATAGATGTTTTAATGTAAAATCACATGCATGCTGACCAGCCTCTTATAAATGAAAGAAGAAAGACATGGGTAATAAATTACATAAATTG
TAGACCCAACCTTTCCAACTACTCCAACTATAATCATTCAAGTTTAGATTAAGCAATACACAATGTAAAAATTAAACTTCTAATTCTACCTTCTATATTATTTTATTATC
CCTAATTCTGTTGCTTGTTTTTATATGTTAGGTTGAACTAAATTATTATTCTTCAATGTTGCTATGCATTGGATTTGCAAATGTCTGTTTATATTTGATCCTCTTTTGTT
GTAAAACTGTAATAATTTGTTACCGCTGTGGCAACAATAGTTTCATTAATTAAATTATGTGAATGATTCATTAATAGGTGAGCTTCAGAAACAATTAAAGACATATTCCG
AAT
Protein sequenceShow/hide protein sequence
MKMDTTGLESANFFSGTASTKLLDGLSSMTSFDIPISAYAVDTDQVDEERNYVRDGATGTIYQLKKLLNCLEEQFIMQHSETSLRNNHFIVLLRS