; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G018340 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G018340
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRibosomal protein L22p/L17e family protein isoform 1
Genome locationCma_Chr04:9252598..9253451
RNA-Seq ExpressionCmaCh04G018340
SyntenyCmaCh04G018340
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012731.1 hypothetical protein SDJN02_25484, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-4289.01Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLR+MEDPKERDRKFRE +YAVKDRCQKTKEMWSYP+RPYGFWTF+RHN QL WDAQISQVPGRRDPYDD+L DI+NNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
XP_008446038.1 PREDICTED: uncharacterized protein LOC103488888 [Cucumis melo]1.3e-4189.01Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS P+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDDLL D NNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]3.1e-4390.11Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKF+MEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
XP_022956462.1 uncharacterized protein LOC111458190 [Cucurbita moschata]2.7e-47100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]1.1e-4391.21Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKF+MEFAENLVLRLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888886.4e-4289.01Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS P+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDDLL D NNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
A0A5A7SSK1 Uncharacterized protein6.4e-4289.01Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAE+LVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWS P+RPYGFWTF+RHN QL+WD QISQVPGRRDPYDDLL D NNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
A0A6J1DD92 uncharacterized protein LOC1110197161.5e-4390.11Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKF+MEFAENLV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWSYP+RPYGFWTFERHN QL+WDAQISQ PGRRDPYDD+L DINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
A0A6J1GWE2 uncharacterized protein LOC1114581901.3e-47100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
A0A6J1K907 uncharacterized protein LOC1114933471.3e-47100Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
        MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein2.7e-3780Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD
        M FIMEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ PIRPYGFWTFERHN QLRWD QISQV GRRDPYDDLL D
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD
AT1G67350.2 unknown protein2.7e-3780Show/hide
Query:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD
        M FIMEFAENLVLRLME+P+ERDRK REH+Y + +RC+K KEMW+ PIRPYGFWTFERHN QLRWD QISQV GRRDPYDDLL D
Subjt:  MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCATCATGGAGTTTGCTGAGAATTTGGTACTAAGACTTATGGAGGATCCAAAAGAGAGGGATCGGAAGTTCCGAGAGCACGTGTACGCGGTGAAGGAT
CGATGCCAAAAGACGAAGGAGATGTGGAGCTATCCGATCCGTCCTTACGGATTTTGGACATTTGAGCGCCACAATTGTCAGCTGCGGTGGGACGCACAAATTAGC
CAGGTTCCTGGTAGGAGGGATCCTTACGATGATTTGCTTACGGACATCAACAATAACTCCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATTAACAGGGAAGGACATTATTGGAAAATCACATTCATTAAATGGGCCTTGCCAGAGGTTGTCCAAGGTCCAGAGAATTTGGGCCTTTGGGCCTGAAGCTTAATT
GAATTTGGGCCTGGTAATGTCTCTAATGAAAATACTGGGCGTTCTTGTATTCTGCTCATTCTTTCGAGTACATTCCTACGAGTACATTCCTACGGGGGGCGAACG
GCGAACTGCTGGCTGATATTTACTGAGGAAGAAATCTTAATTCCTGCAATCGATTTTCGAGGGCTTTCACTGGAGGATTTGTCGATCGGATGAAGTTCATCATGG
AGTTTGCTGAGAATTTGGTACTAAGACTTATGGAGGATCCAAAAGAGAGGGATCGGAAGTTCCGAGAGCACGTGTACGCGGTGAAGGATCGATGCCAAAAGACGA
AGGAGATGTGGAGCTATCCGATCCGTCCTTACGGATTTTGGACATTTGAGCGCCACAATTGTCAGCTGCGGTGGGACGCACAAATTAGCCAGGTTCCTGGTAGGA
GGGATCCTTACGATGATTTGCTTACGGACATCAACAATAACTCCAAGTGA
Protein sequenceShow/hide protein sequence
MKFIMEFAENLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSYPIRPYGFWTFERHNCQLRWDAQISQVPGRRDPYDDLLTDINNNSK