CuGenDBv2

Gene ID	CmaCh04G018930
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like
Genome location	Cma_Chr04:9877427..9878957
RNA-Seq Expression	CmaCh04G018930
Synteny	CmaCh04G018930
Gene Ontology terms	GO:0022900 - electron transport chain (biological process) GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domains	IPR012576 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008460580.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B [Cucumis melo]

3.5e-32

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

XP_022933083.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita moschata]

3.8e-34

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

XP_022974255.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita maxima]

2.7e-32

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

XP_023540348.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Cucurbita pepo subsp. pepo]

4.6e-32

94.59

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHP+LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHHAD SSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

XP_038876540.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like [Benincasa hispida]

6.0e-32

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPS SHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CD83 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

1.7e-32

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI SPSSSHHHH+DASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

A0A6J1F3P5 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.8e-34

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

A0A6J1GG90 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

3.8e-32

94.59

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHP L+NQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

A0A6J1IDH2 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.3e-32

95.95

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRR DEWRKHP LTNQFRHATPGLGIALVAFGIYLVGEQVYNRI+SPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

A0A6J1KDK9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B-like

1.8e-34

100

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Query:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
Subjt:  MANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

SwissProt top hits

e value

%identity

Alignment

O64725 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-A

1.6e-19

67.74

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Query:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHH
        KPLG+TGEFFRRRDEWRKHP L+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHH

Q9M9R9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-B

9.0e-23

66.2

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Query:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        KPLG+TGEFFRRRDEWRKHP L+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

Arabidopsis top hits

e value

%identity

Alignment

AT1G14450.1 NADH dehydrogenase (ubiquinone)s

6.4e-24

66.2

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Query:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH
        KPLG+TGEFFRRRDEWRKHP L+NQ RHA PGLGI + AF +YLVGEQ+YN+  +PS S HHH + ++ +H
Subjt:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

AT2G02510.1 NADH dehydrogenase (ubiquinone)s

1.1e-20

67.74

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Query:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHH
        KPLG+TGEFFRRRDEWRKHP L+NQ RHA PG+GI + AF +YLVGEQ+Y+++ +PSS   H
Subjt:  KPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHH

Sequences

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CDS sequence

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ATGTGGATTGTCACAGAGGAAAGCATGTCCCGGGGCGTCAGTCCAGTCTTACCTATTAGTACATTTTGTCCTTCATGTTTTCTTCCATTGTCTAAAACTAGTCACCCATG
GTCTTTTTCTCAAGGAGGAGCTGTACACGTTTATTTGCATCAAAAGTCAGAGGAGCGACTGTCGTCATGGTCATCTTCGGTCGGAGGAGCGGCTCACAGGCTGTGCAGAT
GTGGGATCGGAGGAGCGATTGTCATTGTGGTCTTCTACAACCGCGATTGTCGTCAGAGGAGTAGTAGTCATAGCGATTCATGGCGCCGAAAGTCGCGACTCTCTCTCTCA
ATTCGTAATGCAAATCCTGACATGTCAATTATATATCTTCTAAGATTTGGTTCAACCTCTCCGTTTGCTCGTCCGTTTGTGGGAAAAAGGAAATCAGAGCAGTCTGCAAT
GGCGAATAAGCCTTTGGGATCGACGGGAGAGTTCTTCAGGAGGAGAGATGAGTGGAGGAAGCATCCGAGTCTCACCAATCAGTTCCGACACGCCACTCCTGGCCTCGGCA
TCGCCCTCGTCGCTTTCGGCATCTACCTTGTCGGCGAGCAAGTCTACAACAGGATCTATTCTCCCTCTTCTTCTCACCACCACCATGCCGATGCATCCTCCGCCACCCAT
TAA

mRNA sequence

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Protein sequence

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MWIVTEESMSRGVSPVLPISTFCPSCFLPLSKTSHPWSFSQGGAVHVYLHQKSEERLSSWSSSVGGAAHRLCRCGIGGAIVIVVFYNRDCRQRSSSHSDSWRRKSRLSLS
IRNANPDMSIIYLLRFGSTSPFARPFVGKRKSEQSAMANKPLGSTGEFFRRRDEWRKHPSLTNQFRHATPGLGIALVAFGIYLVGEQVYNRIYSPSSSHHHHADASSATH

CmaCh04G018930 (gene) of Cucurbita maxima (Rimu) v1.1 genome