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CmaCh04G019780 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G019780
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationCma_Chr04:11544296..11545434
RNA-Seq ExpressionCmaCh04G019780
SyntenyCmaCh04G019780
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040730.1 hypothetical protein E6C27_scaffold45541G00050 [Cucumis melo var. makuwa]2.7e-2496.77Show/hide
Query:  KLMELDLKKPFRGENEQTSNDSFLFLVIVEFIIKMDCPYAVNELILMLGLVAREFGNEISLP
        KLMELDLKKPFRGENEQTSNDSFLFLVIVEF+IKMDCPYAVNELILMLGLVA EFGNEISLP
Subjt:  KLMELDLKKPFRGENEQTSNDSFLFLVIVEFIIKMDCPYAVNELILMLGLVAREFGNEISLP

KAG6383911.1 hypothetical protein SASPL_156335 [Salvia splendens]7.5e-0655.74Show/hide
Query:  MDCPYAVNELILMLGLVAREFGNEISLPKALGTC----RVIEAKEKCFPSVKSRYRPPMLP
        MD PYAVNELILMLGLVA +FGNE SLPKALG+       I+  ++ F S      PP+ P
Subjt:  MDCPYAVNELILMLGLVAREFGNEISLPKALGTC----RVIEAKEKCFPSVKSRYRPPMLP

KVH89095.1 hypothetical protein Ccrd_008925 [Cynara cardunculus var. scolymus]3.9e-1043.44Show/hide
Query:  MDCPYAVNELILMLGLVAREFGNEISLPKAL-----------------------------GTCRVIE----------------AKEKCFPSVKSRYRPPM
        MD PY VNELILMLGLVA +FGNE SLPKAL                              T   I+                 KE+CF SVK RY PPM
Subjt:  MDCPYAVNELILMLGLVAREFGNEISLPKAL-----------------------------GTCRVIE----------------AKEKCFPSVKSRYRPPM

Query:  LPKSAYRGIEREELEPELVGLG
        L +SAYR IER++  PE V LG
Subjt:  LPKSAYRGIEREELEPELVGLG

PHT42545.1 hypothetical protein CQW23_16570 [Capsicum baccatum]1.4e-0786.84Show/hide
Query:  VEFIIKMDCPYAVNELILMLGLVAREFGNEISLPKALG
        +EF+IKMD PYAVNELILMLGLVA EFGNE SLPKALG
Subjt:  VEFIIKMDCPYAVNELILMLGLVAREFGNEISLPKALG

YP_009045821.1 orf116d [Batis maritima]1.0e-0777.5Show/hide
Query:  EAKEKCFPSVKSRYRPPMLPKSAYRGIEREELEPELVGLG
        E KE+CF SVKSRYRPPMLP+ AYRGIERE+  PE VGLG
Subjt:  EAKEKCFPSVKSRYRPPMLPKSAYRGIEREELEPELVGLG

TrEMBL top hitse value%identityAlignment
A0A068BFE4 Orf116d5.1e-0877.5Show/hide
Query:  EAKEKCFPSVKSRYRPPMLPKSAYRGIEREELEPELVGLG
        E KE+CF SVKSRYRPPMLP+ AYRGIERE+  PE VGLG
Subjt:  EAKEKCFPSVKSRYRPPMLPKSAYRGIEREELEPELVGLG

A0A124SB01 Uncharacterized protein1.9e-1043.44Show/hide
Query:  MDCPYAVNELILMLGLVAREFGNEISLPKAL-----------------------------GTCRVIE----------------AKEKCFPSVKSRYRPPM
        MD PY VNELILMLGLVA +FGNE SLPKAL                              T   I+                 KE+CF SVK RY PPM
Subjt:  MDCPYAVNELILMLGLVAREFGNEISLPKAL-----------------------------GTCRVIE----------------AKEKCFPSVKSRYRPPM

Query:  LPKSAYRGIEREELEPELVGLG
        L +SAYR IER++  PE V LG
Subjt:  LPKSAYRGIEREELEPELVGLG

A0A2G2WBB7 Uncharacterized protein6.6e-0886.84Show/hide
Query:  VEFIIKMDCPYAVNELILMLGLVAREFGNEISLPKALG
        +EF+IKMD PYAVNELILMLGLVA EFGNE SLPKALG
Subjt:  VEFIIKMDCPYAVNELILMLGLVAREFGNEISLPKALG

A0A4D8Y8F6 Uncharacterized protein5.3e-0572.5Show/hide
Query:  MDCPYAVNELILMLGLVAREFGNEISLPKALGTCRVIEAK
        MD PYAVNELILMLGLVA +FGNE SLPKALG+   + A+
Subjt:  MDCPYAVNELILMLGLVAREFGNEISLPKALGTCRVIEAK

A0A5A7TBN1 Uncharacterized protein1.3e-2496.77Show/hide
Query:  KLMELDLKKPFRGENEQTSNDSFLFLVIVEFIIKMDCPYAVNELILMLGLVAREFGNEISLP
        KLMELDLKKPFRGENEQTSNDSFLFLVIVEF+IKMDCPYAVNELILMLGLVA EFGNEISLP
Subjt:  KLMELDLKKPFRGENEQTSNDSFLFLVIVEFIIKMDCPYAVNELILMLGLVAREFGNEISLP

SwissProt top hitse value%identityAlignment
P08834 NADH-ubiquinone oxidoreductase chain 17.3e-0476.92Show/hide
Query:  GTCRVIEAKEKCFPSVKSRYRPPMLP
        G  +VIEAKE+CFPSVKSRYRPP  P
Subjt:  GTCRVIEAKEKCFPSVKSRYRPPMLP

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATATATTTCAGGAGCTAGATCAGTTGCCGATAAACAAGTCAGAATTGCCTCAACCAAATTGATGGAATTGGACCTAAAAAAGCCATTCAGAGGGGAGAACGAGCA
GACATCGAACGATTCATTTCTCTTTCTTGTTATCGTGGAATTCATCATCAAGATGGATTGCCCTTACGCGGTCAACGAACTCATACTAATGCTAGGACTTGTCGCAAGAG
AATTCGGAAATGAAATCAGTTTACCGAAAGCCCTTGGTACTTGTCGGGTAATAGAAGCTAAGGAGAAATGCTTTCCATCAGTCAAAAGCAGATATCGCCCACCCATGCTC
CCCAAGTCTGCTTACCGAGGAATAGAAAGGGAAGAACTGGAGCCAGAGCTAGTTGGGTTGGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATATATTTCAGGAGCTAGATCAGTTGCCGATAAACAAGTCAGAATTGCCTCAACCAAATTGATGGAATTGGACCTAAAAAAGCCATTCAGAGGGGAGAACGAGCA
GACATCGAACGATTCATTTCTCTTTCTTGTTATCGTGGAATTCATCATCAAGATGGATTGCCCTTACGCGGTCAACGAACTCATACTAATGCTAGGACTTGTCGCAAGAG
AATTCGGAAATGAAATCAGTTTACCGAAAGCCCTTGGTACTTGTCGGGTAATAGAAGCTAAGGAGAAATGCTTTCCATCAGTCAAAAGCAGATATCGCCCACCCATGCTC
CCCAAGTCTGCTTACCGAGGAATAGAAAGGGAAGAACTGGAGCCAGAGCTAGTTGGGTTGGGGTAA
Protein sequenceShow/hide protein sequence
MSYISGARSVADKQVRIASTKLMELDLKKPFRGENEQTSNDSFLFLVIVEFIIKMDCPYAVNELILMLGLVAREFGNEISLPKALGTCRVIEAKEKCFPSVKSRYRPPML
PKSAYRGIEREELEPELVGLG