CuGenDBv2

Gene ID	CmaCh04G019890
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	NADH-ubiquinone oxidoreductase chain 1
Genome location	Cma_Chr04:11773681..11774409
RNA-Seq Expression	CmaCh04G019890
Synteny	CmaCh04G019890
Gene Ontology terms	GO:0009060 - aerobic respiration (biological process) GO:0022900 - electron transport chain (biological process) GO:0005747 - mitochondrial respiratory chain complex I (cellular component) GO:0005886 - plasma membrane (cellular component) GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domains	IPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

Homology

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GenBank top hits

e value

%identity

Alignment

AES96689.1 NADH-quinone oxidoreductase protein [Medicago truncatula]

2.2e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

KAF4349930.1 hypothetical protein G4B88_002352 [Cannabis sativa]

2.9e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

KAG4905997.1 hypothetical protein JHK86_057244 [Glycine max]

2.9e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

KAG4906012.1 hypothetical protein JHK86_057259 [Glycine max]

2.9e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

XP_015947283.1 uncharacterized protein LOC107472263 [Arachis duranensis]

2.9e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

TrEMBL top hits

e value

%identity

Alignment

A0A072THI4 NADH-quinone oxidoreductase protein

1.4e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

A0A5A7TCA6 Uncharacterized protein

1.4e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

A0A6P5MYB5 uncharacterized protein LOC107472259

1.4e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

G7KDW1 NADH-quinone oxidoreductase protein

1.1e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

R4ITZ7 NADH-ubiquinone oxidoreductase chain 1

1.4e-27

91.67

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYARDAILNSPLLAEANV GSRG++
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGML

SwissProt top hits

e value

%identity

Alignment

P08834 NADH-ubiquinone oxidoreductase chain 1

2.3e-27

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRG
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEYA DAILNSPLLAEANV G  G
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRG

P31839 NADH-ubiquinone oxidoreductase chain 1

1.1e-16

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        M QKQIW GIPLFPVLVMFFIS L ETNRA FDLPEAEAE VAGYNVEY+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

P92558 NADH-ubiquinone oxidoreductase chain 1

1.1e-16

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        M QKQIW GIPLFPVLVMFFIS L ETNRA FDLPEAEAE VAGYNVEY+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

Q01148 NADH-ubiquinone oxidoreductase chain 1

1.1e-16

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        M QKQIW GIPLFPVLVMFFIS L ETNRA FDLPEAEAE VAGYNVEY+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

Q01300 NADH-ubiquinone oxidoreductase chain 1

3.0e-19

71.83

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGM
        M QKQIWSGIPLFPVLVMFFISRL ETNRA FDLPEAEAESVAGYNVEY+      S L   AN++   G+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGM

Arabidopsis top hits

e value

%identity

Alignment

ATCG01100.1 NADH dehydrogenase family protein

2.2e-04

55.88

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Query:  VMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        ++F IS L E  R  FDLPEAE E +AGY  EY+
Subjt:  VMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

ATMG00516.1 NADH dehydrogenase 1C

1.8e-19

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        M QKQIWSGIPLFPVLVMF ISRL ETNRA FDLPEAEAESVAGYNVEY+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

ATMG01120.1 NADH dehydrogenase 1B

1.8e-19

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        M QKQIWSGIPLFPVLVMF ISRL ETNRA FDLPEAEAESVAGYNVEY+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

ATMG01275.1 NADH dehydrogenase 1A

1.8e-19

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Query:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA
        M QKQIWSGIPLFPVLVMF ISRL ETNRA FDLPEAEAESVAGYNVEY+
Subjt:  MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYA

Sequences

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CDS sequence

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ATGGTGCAAAAGCAGATATGGTCTGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGTAGAAACTAATCGAGCTTTGTTTGATCTCCCA
GAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCCCGGGATGCGATCCTTAATAGTCCACTGTTGGCGGAAGCCAATGTTCTGGGGTCCCGGGGA
ATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAAC

mRNA sequence

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GTCTCCGTAATTCGAGTGAGATTGTCATGGTGCAAAAGCAGATATGGTCTGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGTAGAAA
CTAATCGAGCTTTGTTTGATCTCCCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCCCGGGATGCGATCCTTAATAGTCCACTGTTGGCGG
AAGCCAATGTTCTGGGGTCCCGGGGAATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAAC

Protein sequence

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MVQKQIWSGIPLFPVLVMFFISRLVETNRALFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVLGSRGMLAGAGHSSFFIRN

CmaCh04G019890 (gene) of Cucurbita maxima (Rimu) v1.1 genome