CuGenDBv2

Gene ID	CmaCh04G019910
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	Cma_Chr04:11801949..11807646
RNA-Seq Expression	CmaCh04G019910
Synteny	CmaCh04G019910
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009536 - plastid (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005488 - binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADM92685.1 photosystem I P700 apoprotein A2, partial [Franklinia alatamaha]

6.6e-41

56.45

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQARPFPCKTF---LQFGIL
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFE+WVQ  PF CK     +     
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQARPFPCKTF---LQFGIL

Query:  GQP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        GQP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  GQP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

PHU04724.1 Photosystem I chlorophyll a apoprotein A2 [Capsicum chinense]

1.0e-41

64.74

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ------ARPFPCKTFLQF
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFE+WVQ          P    +  
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ------ARPFPCKTFLQF

Query:  GILGQP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL
           GQP  E     G L PVNIAYS GWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  GILGQP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL

QEL51494.1 photosystem I P700 apoprotein A2 [Pseudostellaria palibiniana]

2.5e-40

56.15

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ----ARPFPCKTFLQFGI
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFE+WVQ     RP     F  F  
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ----ARPFPCKTFLQFGI

Query:  LGQP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
         GQP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  LGQP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

QFQ43767.1 photosystem I P700 apoprotein A2 [Plagiopetalum esquirolii]

2.5e-40

56.22

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLYH++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

RDY14673.1 Photosystem I P700 chlorophyll a apoprotein A2, partial [Mucuna pruriens]

1.7e-44

67.76

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYSAGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL

TrEMBL top hits

e value

%identity

Alignment

A0A2G3BE12 Photosystem I chlorophyll a apoprotein A2

4.9e-42

64.74

Show/hide

Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ------ARPFPCKTFLQF
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFE+WVQ          P    +  
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ------ARPFPCKTFLQF

Query:  GILGQP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL
           GQP  E     G L PVNIAYS GWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  GILGQP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL

A0A371II22 Photosystem I P700 chlorophyll a apoprotein A2 (Fragment)

8.1e-45

67.76

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYSAGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGL

A0A4D5YP51 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-40

56.22

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLYH++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

A0A5P8GMS0 Photosystem I P700 chlorophyll a apoprotein A2

1.2e-40

56.22

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLYH++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

F4YK62 Photosystem I (Fragment)

3.2e-41

56.45

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQARPFPCKTF---LQFGIL
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFE+WVQ  PF CK     +     
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQARPFPCKTF---LQFGIL

Query:  GQP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        GQP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  GQP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

SwissProt top hits

e value

%identity

Alignment

P58385 Photosystem I P700 chlorophyll a apoprotein A2

2.8e-42

55.68

Show/hide

Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

Q09X18 Photosystem I P700 chlorophyll a apoprotein A2

2.8e-42

55.68

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

Q49KZ9 Photosystem I P700 chlorophyll a apoprotein A2

2.8e-42

55.68

Show/hide

Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

Q4VZN4 Photosystem I P700 chlorophyll a apoprotein A2

2.8e-42

55.68

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

Q9MTN7 Photosystem I P700 chlorophyll a apoprotein A2

2.8e-42

55.68

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Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFEAWVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                 AGWLHLQPKWK S+SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

6.3e-42

54.05

Show/hide

Query:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG
        MAL FPRFSQGL QDPTTR IWFGIATA DFE HDDITEERLY ++FAS F   AI   + ++TS N FHVAWQGNFE WVQ      P    +     G
Subjt:  MALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFAS-FAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ--ARPFPCKTFLQFGILG

Query:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL
        QP  E     G L PVNIAYS                                  GWLHLQPKWK  +SWF+NAESRLNHHLSGL
Subjt:  QP--EKLLIEGVL-PVNIAYS---------------------------------AGWLHLQPKWKASLSWFQNAESRLNHHLSGL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

2.5e-06

27.27

Show/hide

Query:  FSQGLTQDP-TTRGIWFGIATAPDFERHDDITEERLYHHLFASFAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ-----------ARPFPCKTFLQFGI
        FS+ + + P TT  IW   A A DF+ H    EE       A F   +I   + ++ S  +FH A   N+EAW+              P   +  L   +
Subjt:  FSQGLTQDP-TTRGIWFGIATAPDFERHDDITEERLYHHLFASFAFRAISQNLSVYTSVNHFHVAWQGNFEAWVQ-----------ARPFPCKTFLQFGI

Query:  LG------------------------QPEKLLIEGVLPVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGLI
         G                        Q     I  ++   +   AGW H   K    L+WFQ+ ES LNHHL+GL+
Subjt:  LG------------------------QPEKLLIEGVLPVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGLI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAAGTTGCTCCTGCTACACTCAGCCTAGAGCCTTGTTTGAGCATTGTCCAAGGACGTGCTGTAGGAGTAACCCATCCATTACCTTACCTTCTGGGTGGAATTGCCA
CAACATAGGCGCTCTTTCTCTTCTTAGCAAGAATTATTGCAGTCCGATAATGGCTAGGAGGATTTGCATTATGGCACTAGGATTTCCAAGGTTTAGCCAAGGCTTAACTC
AGGACCCCACTACTCGTGGTATTTGGTTTGGTATTGCTACCGCGCCTGACTTCGAAAGGCATGATGATATTACTGAAGAACGTCTTTATCATCATCTTTTTGCTTCCTTC
GCATTTCGGGCAATTAGCCAGAATTTGTCTGTGTATACTTCCGTAAATCACTTTCATGTAGCTTGGCAAGGCAATTTTGAAGCATGGGTACAAGCAAGACCCTTTCCATG
TAAGACCTTTTTGCAATTTGGGATCCTCGGTCAACCGGAAAAGCTTTTAATCGAGGGGGTGCTCCCAGTGAATATCGCTTATTCTGCGGGTTGGTTACACCTACAACCGA
AATGGAAAGCGAGCCTTTCGTGGTTTCAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTAATCATTCGGACTATGCCACCCCCGGAATTGAAAGAACCTAAA
GGAGCGCATGGGGCATATATTCCGCAGAACGTCGTTCTTGCCAAGGTTGTATATCTTTGCTTGCCTACTCAAGTCCAAACCATTAGGCTCCCTTACTTAGTGGTTCTAAC
CAAGGAGCACGCGGATCCAAAAAACGCATAG

mRNA sequence

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Protein sequence

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MKSCSCYTQPRALFEHCPRTCCRSNPSITLPSGWNCHNIGALSLLSKNYCSPIMARRICIMALGFPRFSQGLTQDPTTRGIWFGIATAPDFERHDDITEERLYHHLFASF
AFRAISQNLSVYTSVNHFHVAWQGNFEAWVQARPFPCKTFLQFGILGQPEKLLIEGVLPVNIAYSAGWLHLQPKWKASLSWFQNAESRLNHHLSGLIIRTMPPPELKEPK
GAHGAYIPQNVVLAKVVYLCLPTQVQTIRLPYLVVLTKEHADPKNA

CmaCh04G019910 (gene) of Cucurbita maxima (Rimu) v1.1 genome