; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G019930 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G019930
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPhotosystem I PsaA/PsaB
Genome locationCma_Chr04:11838959..11842918
RNA-Seq ExpressionCmaCh04G019930
SyntenyCmaCh04G019930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7831153.1 photosystem I P700 apoprotein A1 [Senna tora]2.2e-0481.25Show/hide
Query:  GYTYNRNRKRAFRGFKMPNLVSIIICQDYSFG
        GYTYNRN  RAFRG KMPN VSIIICQ YS G
Subjt:  GYTYNRNRKRAFRGFKMPNLVSIIICQDYSFG
KVH74158.1 Photosystem I PsaA/PsaB, partial [Cynara cardunculus var. scolymus]4.4e-0543.48Show/hide
Query:  TTRLLYSSCVIYPSPIHSRMNYDRQELFLMELYSRDYNTKQNENNVMGRECSYLDILFGLLDFYYEFPG
        +TRL YSSCVIY SPIH R++ DR        + RDYN +QNE+NV+ R   + + +   L +   F G
Subjt:  TTRLLYSSCVIYPSPIHSRMNYDRQELFLMELYSRDYNTKQNENNVMGRECSYLDILFGLLDFYYEFPG
MBA0754883.1 hypothetical protein [Gossypium gossypioides]8.4e-0477.42Show/hide
Query:  VGYTYNRNRKRAFRGFKMPNLVSIIICQDYS
        VGYTYNR+  RAF G K PNLV+IIICQDYS
Subjt:  VGYTYNRNRKRAFRGFKMPNLVSIIICQDYS
TrEMBL top hitse value%identityAlignment
A0A103WKT7 Photosystem I PsaA/PsaB (Fragment)2.2e-0543.48Show/hide
Query:  TTRLLYSSCVIYPSPIHSRMNYDRQELFLMELYSRDYNTKQNENNVMGRECSYLDILFGLLDFYYEFPG
        +TRL YSSCVIY SPIH R++ DR        + RDYN +QNE+NV+ R   + + +   L +   F G
Subjt:  TTRLLYSSCVIYPSPIHSRMNYDRQELFLMELYSRDYNTKQNENNVMGRECSYLDILFGLLDFYYEFPG
A0A4U5Q400 Photosystem I5.3e-0475.76Show/hide
Query:  VGYTYNRNRKRAFRGFKMPNLVSIIICQDYSFG
        VGYTYNRN   AFRG KMPNLVS  ICQDY  G
Subjt:  VGYTYNRNRKRAFRGFKMPNLVSIIICQDYSFG
A0A7J9D2C5 Uncharacterized protein4.1e-0477.42Show/hide
Query:  VGYTYNRNRKRAFRGFKMPNLVSIIICQDYS
        VGYTYNR+  RAF G K PNLV+IIICQDYS
Subjt:  VGYTYNRNRKRAFRGFKMPNLVSIIICQDYS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGGCGTGGTTATTGGCAAGAACTTATTGAATCCAGCGCTTGGCAAGGCAATTTTGAATCATGGGTACAAGCAAGACCCTTTCCATGTTGGTTACACCTACAACCG
AAATCGAAAGCGAGCCTTTCGTGGTTTCAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCATTTGGAGTCAGTTCCTTGGCTTGGACAGGCCATTTCA
GCCATCACAAGAAGACGACTCGACTACTCTACTCAAGCTGCGTTATATACCCATCACCAATACATAGCAGGATGAATTATGACAGACAGGAGCTTTTTCTCATGGAGCTA
TATTCTAGAGATTACAATACCAAACAGAATGAGAATAATGTAATGGGGCGCGAATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTCTATTATGAATTTCCTGG
CGGGGGGATATTGGTAAGAAGAATTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGGCGTGGTTATTGGCAAGAACTTATTGAATCCAGCGCTTGGCAAGGCAATTTTGAATCATGGGTACAAGCAAGACCCTTTCCATGTTGGTTACACCTACAACCG
AAATCGAAAGCGAGCCTTTCGTGGTTTCAAAATGCCGAATCTCGTCTCAATCATCATTTGTCAGGACTATTCATTTGGAGTCAGTTCCTTGGCTTGGACAGGCCATTTCA
GCCATCACAAGAAGACGACTCGACTACTCTACTCAAGCTGCGTTATATACCCATCACCAATACATAGCAGGATGAATTATGACAGACAGGAGCTTTTTCTCATGGAGCTA
TATTCTAGAGATTACAATACCAAACAGAATGAGAATAATGTAATGGGGCGCGAATGTTCTTATTTGGACATCTTGTTTGGGCTACTGGATTTCTATTATGAATTTCCTGG
CGGGGGGATATTGGTAAGAAGAATTGATTGA
Protein sequenceShow/hide protein sequence
MPGVVIGKNLLNPALGKAILNHGYKQDPFHVGYTYNRNRKRAFRGFKMPNLVSIIICQDYSFGVSSLAWTGHFSHHKKTTRLLYSSCVIYPSPIHSRMNYDRQELFLMEL
YSRDYNTKQNENNVMGRECSYLDILFGLLDFYYEFPGGGILVRRID