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CmaCh04G019960 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G019960
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCLAVATA3/ESR (CLE)-related protein 12
Genome locationCma_Chr04:12001061..12001318
RNA-Seq ExpressionCmaCh04G019960
SyntenyCmaCh04G019960
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3958485.1 hypothetical protein CMV_016625 [Castanea mollissima]1.2e-0945.65Show/hide
Query:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPF------FPRPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I+ IT+S +  SNHP  TRKVLAS+ DFTPF        + +  + + H + +  +   PD    ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPF------FPRPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

KAG6601759.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3794.12Show/hide
Query:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MNCKSI NITFSYSSSSNHP TTRK LASKVDFTPFFP P+PNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
Subjt:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

KAG7032483.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3794.12Show/hide
Query:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MNCKSI NITFSYSSSSNHP TTRK LASKVDFTPFFP P+PNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
Subjt:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

XP_023903065.1 CLAVATA3/ESR (CLE)-related protein 12 [Quercus suber]5.6e-1047.73Show/hide
Query:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFP--RPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I+ IT+S +  SNHP  TRKVLAS+ DFTPF    + +  + + H + +  +   PD    ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFP--RPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

XP_027365548.1 CLAVATA3/ESR (CLE)-related protein 12 [Abrus precatorius]8.6e-1156Show/hide
Query:  YSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKL--EPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +S  S+HPF +RKVLASK DFTPFF     ++  KH  P V +  +PPD+   ++DP YGVEKRRVP GPNPLH+
Subjt:  YSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKL--EPPDSAADDVDPLYGVEKRRVPNGPNPLHN

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ3 Uncharacterized protein3.2e-1963.95Show/hide
Query:  MNCKSISNITFS-YSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        MN +    ITFS YSSSSNHP  TRKVL SKVDFTPFF    PN+PRKHS P       + A  D+DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSISNITFS-YSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

A0A2N9J7P0 Uncharacterized protein1.4e-1148.86Show/hide
Query:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFP--RPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K IS +T+S  S  +HP  TRKVLASK DFTPF    + +  + + HS+ +  +   P+ A  ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFP--RPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

A0A371DZ46 CLAVATA3/ESR (CLE)-related protein 12 (Fragment)2.3e-0952.7Show/hide
Query:  SYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        S+S  S+HPF +RK LASK DFTPF    K +    H    V+ +P D+   ++DP YGVEKRRVP GPNPLH+
Subjt:  SYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

A0A7N2KK79 Uncharacterized protein1.9e-1148.84Show/hide
Query:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN
        +N K I+ IT+S +  SNHP  TRKVLAS+ DFTPF    +  + + H + +  +   PD    ++DP YGVEKRRVP GPNPLH+
Subjt:  MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLE-PPDSAADDVDPLYGVEKRRVPNGPNPLHN

V7BG00 Uncharacterized protein7.8e-1053.52Show/hide
Query:  SSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        SSS+H    RK LA+K DF+PFF         KH +P V +  PD +  D+DP YGVEKRRVP GPNPLH+
Subjt:  SSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

SwissProt top hitse value%identityAlignment
Q29PU4 CLAVATA3/ESR (CLE)-related protein 124.1e-0844.12Show/hide
Query:  NHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        ++   +RKVL+ + DFTPF  R   +  R + R   + +      D++DP YGVEKRRVP+GPNPLH+
Subjt:  NHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 131.6e-0446.03Show/hide
Query:  RKVLASKV-DFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R+ LA K  DFTPF    + +  RK + PA           ++DP YGVEKR VP+GPNPLH+
Subjt:  RKVLASKV-DFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 97.5e-0552.38Show/hide
Query:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R  + SR    L PP     ++DP YGV+KR VP+GPNPLHN
Subjt:  RPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G68795.1 CLAVATA3/ESR-RELATED 122.9e-0944.12Show/hide
Query:  NHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        ++   +RKVL+ + DFTPF  R   +  R + R   + +      D++DP YGVEKRRVP+GPNPLH+
Subjt:  NHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G69320.1 CLAVATA3/ESR-RELATED 103.7e-0450Show/hide
Query:  RKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R H      L  P     ++D  YGVEKR VP+GPNPLHN
Subjt:  RKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN

AT1G73965.1 CLAVATA3/ESR-RELATED 131.2e-0546.03Show/hide
Query:  RKVLASKV-DFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN
        R+ LA K  DFTPF    + +  RK + PA           ++DP YGVEKR VP+GPNPLH+
Subjt:  RKVLASKV-DFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGCAAATCAATATCAAACATCACATTTTCCTATTCTTCCTCCTCCAACCATCCCTTCACTACAAGAAAAGTACTGGCTAGCAAGGTTGACTTCACTCCCTTTTT
TCCCCGCCCGAAGCCAAATAGACCCAGAAAGCATTCACGACCTGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGC
GGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGCAAATCAATATCAAACATCACATTTTCCTATTCTTCCTCCTCCAACCATCCCTTCACTACAAGAAAAGTACTGGCTAGCAAGGTTGACTTCACTCCCTTTTT
TCCCCGCCCGAAGCCAAATAGACCCAGAAAGCATTCACGACCTGCTGTCAAACTCGAACCGCCCGACTCTGCTGCAGACGACGTTGATCCGCTCTACGGGGTTGAGAAGC
GGCGTGTTCCTAATGGTCCAAACCCATTGCACAATTGA
Protein sequenceShow/hide protein sequence
MNCKSISNITFSYSSSSNHPFTTRKVLASKVDFTPFFPRPKPNRPRKHSRPAVKLEPPDSAADDVDPLYGVEKRRVPNGPNPLHN