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CmaCh04G019970 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G019970
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionPARP catalytic domain-containing protein
Genome locationCma_Chr04:12051709..12051960
RNA-Seq ExpressionCmaCh04G019970
SyntenyCmaCh04G019970
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR50997.1 hypothetical protein CICLE_v10033191mg [Citrus clementina]3.6e-0644.32Show/hide
Query:  MAPALSNTSISC---------LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS
        MA + S++S  C         LL L++++L+    +ARP   TM + N +     + +++RQ F+FLPKG PIPPS PSKRHNSVVDS
Subjt:  MAPALSNTSISC---------LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS

KAG6579701.1 hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1563.64Show/hide
Query:  APALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVD
        A   +N S + LL   LL LL  F+SARPAPATM   +F P PN A +F  Q FSFLPKG PIPPSAPSKRHNSVVD
Subjt:  APALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVD

KAG6601760.1 hypothetical protein SDJN03_06993, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3189.16Show/hide
Query:  MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSAHRD
        MAPALSNTSIS    LLLLILLPPFTSARP PATMPTHNFLPTPNAAIQF+RQFFSFLP+GVPIPPSAPSKRHNSV+ SAHRD
Subjt:  MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSAHRD

KGN51548.1 hypothetical protein Csa_008377 [Cucumis sativus]1.3e-0857.89Show/hide
Query:  SISCLLLLLLLILLPPFTSARPAPATMPT----HNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSA
        S S   +LLL++ LP FT+ARP PAT  T    HN   T   A +F  Q FSFLPKG PIPPSAPSKRHNS+++SA
Subjt:  SISCLLLLLLLILLPPFTSARPAPATMPT----HNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSA

KGN52035.1 hypothetical protein Csa_008746 [Cucumis sativus]7.3e-0750.6Show/hide
Query:  MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLP----TPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS
        M  + S TSI   +LLLLL+LL   +SA     TM      P    +   A ++  Q FSFLPKGVPIPPS PS RHNSVVDS
Subjt:  MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLP----TPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS

TrEMBL top hitse value%identityAlignment
A0A067FVE8 Uncharacterized protein3.9e-0645.98Show/hide
Query:  MAPALSNTS----ISC----LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS
        MA + S++S    I+C    LL L++++L+    +ARP   TM + N +     + +++RQ F+FLPKG PIPPS PSKRHNSVVDS
Subjt:  MAPALSNTS----ISC----LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS

A0A0A0KPP8 Uncharacterized protein6.5e-0957.89Show/hide
Query:  SISCLLLLLLLILLPPFTSARPAPATMPT----HNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSA
        S S   +LLL++ LP FT+ARP PAT  T    HN   T   A +F  Q FSFLPKG PIPPSAPSKRHNS+++SA
Subjt:  SISCLLLLLLLILLPPFTSARPAPATMPT----HNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSA

A0A0A0KR07 Uncharacterized protein3.6e-0750.6Show/hide
Query:  MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLP----TPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS
        M  + S TSI   +LLLLL+LL   +SA     TM      P    +   A ++  Q FSFLPKGVPIPPS PS RHNSVVDS
Subjt:  MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLP----TPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS

A0A2H5QH42 Uncharacterized protein3.9e-0645.98Show/hide
Query:  MAPALSNTS----ISC----LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS
        MA + S++S    I+C    LL L++++L+    +ARP   TM + N +     + +++RQ F+FLPKG PIPPS PSKRHNSVVDS
Subjt:  MAPALSNTS----ISC----LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS

V4TCI5 PARP catalytic domain-containing protein1.8e-0644.32Show/hide
Query:  MAPALSNTSISC---------LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS
        MA + S++S  C         LL L++++L+    +ARP   TM + N +     + +++RQ F+FLPKG PIPPS PSKRHNSVVDS
Subjt:  MAPALSNTSISC---------LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDS

SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA6.0e-0441.18Show/hide
Query:  LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRR-QFFSFLPKGVPIPPSAPSKRHNSVVDS
        +++LL  +L    +S+  A A +     +      + F+    F +LPKGVPIPPSAPSKRHNS V+S
Subjt:  LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRR-QFFSFLPKGVPIPPSAPSKRHNSVVDS

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein4.3e-0541.18Show/hide
Query:  LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRR-QFFSFLPKGVPIPPSAPSKRHNSVVDS
        +++LL  +L    +S+  A A +     +      + F+    F +LPKGVPIPPSAPSKRHNS V+S
Subjt:  LLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRR-QFFSFLPKGVPIPPSAPSKRHNSVVDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCCCGCTCTCTCCAACACCTCCATCTCCTGCCTCCTCCTCCTCCTCCTCCTCATTCTTCTTCCCCCCTTCACCTCTGCAAGGCCAGCTCCCGCAACAATGCCCAC
CCACAATTTCTTACCCACACCAAACGCCGCCATCCAATTCCGTCGTCAATTCTTCAGCTTCCTTCCCAAAGGGGTTCCCATTCCGCCCTCCGCGCCCTCCAAGAGACACA
ACTCCGTCGTTGACTCCGCCCACCGCGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCCCGCTCTCTCCAACACCTCCATCTCCTGCCTCCTCCTCCTCCTCCTCCTCATTCTTCTTCCCCCCTTCACCTCTGCAAGGCCAGCTCCCGCAACAATGCCCAC
CCACAATTTCTTACCCACACCAAACGCCGCCATCCAATTCCGTCGTCAATTCTTCAGCTTCCTTCCCAAAGGGGTTCCCATTCCGCCCTCCGCGCCCTCCAAGAGACACA
ACTCCGTCGTTGACTCCGCCCACCGCGACTGA
Protein sequenceShow/hide protein sequence
MAPALSNTSISCLLLLLLLILLPPFTSARPAPATMPTHNFLPTPNAAIQFRRQFFSFLPKGVPIPPSAPSKRHNSVVDSAHRD