| GenBank top hits | e value | %identity | Alignment |
|---|
| ALO21718.1 RpoC2 [Cucurbita argyrosperma] | 8.8e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| ALO22260.1 RpoC2 [Cucurbita lundelliana] | 8.8e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| ALO22384.1 RpoC2 [Cucurbita moschata] | 8.8e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| ALO22869.1 RpoC2 [Cucurbita pedatifolia] | 8.8e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| YP_009447525.1 RNA polymerase beta'' subunit [Cucurbita moschata] | 8.8e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0S2IDT9 DNA-directed RNA polymerase | 4.2e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| A0A0S2IDY7 DNA-directed RNA polymerase | 4.2e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| A0A0S2IEZ1 DNA-directed RNA polymerase | 4.2e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| A0A0S2IG43 DNA-directed RNA polymerase | 4.2e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| A0A2H4T1Y3 DNA-directed RNA polymerase subunit beta'' | 4.2e-139 | 96.98 | Show/hide |
Query: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
++ + SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Subjt: RIQRISAPSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTI
Query: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Subjt: VQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETA
Query: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
Subjt: RVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| A0ZZ25 DNA-directed RNA polymerase subunit beta'' | 1.7e-129 | 92.58 | Show/hide |
Query: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
SAKPYLAT GATVH HYGE LYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNE ITRILGIPWGF+IGAELTIVQSR+SLV
Subjt: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
Query: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
NKIQKVYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVF PGELIGLLRAERTGRALEEAICYRAVLLGIT+ASLNTQSFISEASFQETARVLAKAAL
Subjt: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
Query: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDI
RGRIDWL+GLKENVVLGGMIP GTGF+ L HRSRQHNNI LET K FF GEMRDI
Subjt: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDI
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| A6MM26 DNA-directed RNA polymerase subunit beta'' | 2.2e-132 | 93.39 | Show/hide |
Query: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
SAKPYLAT GATVH HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKR+EGWNERI RILGIPWGFLIGAELTI QSRISLV
Subjt: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
Query: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
NKIQKVYRSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGIT+ASLNTQSFISEASFQETARVLAKAAL
Subjt: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
Query: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RGRIDWL+GLKENVVLGG+IPVGTGF+ L HRSRQHNNIPLET K FEGEMRDIL
Subjt: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| A6MMB2 DNA-directed RNA polymerase subunit beta'' | 1.2e-130 | 91.83 | Show/hide |
Query: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
SAKP+LAT GATVH HYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSIS+NLEKR+EGWNERITRI+GIPWGFLIGAELTI QSRISLV
Subjt: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
Query: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
NKIQKVYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRA+LLGIT+ SLNTQSFISEASFQETARVLAKAAL
Subjt: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
Query: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RGRIDWL+GLKENVVLGGMIPVGTGF+ L HRSRQHNN PLE K FEGEMRDIL
Subjt: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| Q0G9M9 DNA-directed RNA polymerase subunit beta'' | 1.6e-130 | 92.61 | Show/hide |
Query: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
SAKP+LAT GATVH HYGEIL EGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNE ITRILGIPWGFLIGAELTI QSRISLV
Subjt: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
Query: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
NKIQKVYRSQGV+IHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEE ICYRA+LLGIT+ASLNTQSFISEASFQETARVLAKAAL
Subjt: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
Query: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RGRIDWL+GLKENVVLGGMIPVGTGF+ L HRSRQHNNIPLE K FEGEMRDIL
Subjt: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| Q4VZP3 DNA-directed RNA polymerase subunit beta'' | 2.2e-140 | 99.22 | Show/hide |
Query: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISM+LEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
Subjt: SAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELTIVQSRISLV
Query: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
Subjt: NKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQETARVLAKAAL
Query: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKK FEGEMRDIL
Subjt: RGRIDWLRGLKENVVLGGMIPVGTGFRELAHRSRQHNNIPLETPPKKFFEGEMRDIL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G35800.1 RNA polymerase II large subunit | 1.9e-06 | 35.63 | Show/hide |
Query: EAICYRAVLLGITKASLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFREL-AHRSRQHNNIPLETP
+ + YR L+ IT+ +N + SF+ET +L AA D LRG+ EN++LG + P+GTG EL + N I L+ P
Subjt: EAICYRAVLLGITKASLNTQSF--ISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFREL-AHRSRQHNNIPLETP
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| AT5G60040.1 nuclear RNA polymerase C1 | 2.3e-04 | 31.17 | Show/hide |
Query: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
L + + YR +LGI + + +S + +ASF+ T L AA G++D + G+ E V++G + +GTG ++ R+
Subjt: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
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| AT5G60040.2 nuclear RNA polymerase C1 | 2.3e-04 | 31.17 | Show/hide |
Query: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
L + + YR +LGI + + +S + +ASF+ T L AA G++D + G+ E V++G + +GTG ++ R+
Subjt: LEEAICYRAVLLGITKASLN--TQSFISEASFQETARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRELAHRS
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| ATCG00170.1 DNA-directed RNA polymerase family protein | 2.2e-124 | 84.15 | Show/hide |
Query: IQRISA--PSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELT
+QR SA SAKPYLAT GA VH HY EILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSIS+NLEKRI+GWN+ ITRILGIPWGFLIGAELT
Subjt: IQRISA--PSAKPYLATSGATVHRHYGEILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRIEGWNERITRILGIPWGFLIGAELT
Query: IVQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQET
IVQSRISLVNKIQKVYRSQGV+IHNRHIEIIVRQITSKVLVSE+GMSNVF PGELIGLLRAERTGRALEEAICYRAVLLGIT+ASLNTQSFISEASFQET
Subjt: IVQSRISLVNKIQKVYRSQGVEIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERTGRALEEAICYRAVLLGITKASLNTQSFISEASFQET
Query: ARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRE-LAHRSRQHNNIPLETPPKK--FFEGEMRDILSF------SLIDKSD
ARVLAKAALRGRIDWL+GLKENVVLGG+IP GTGF + L H SRQH NI LE K FEG+MRDIL + S I KSD
Subjt: ARVLAKAALRGRIDWLRGLKENVVLGGMIPVGTGFRE-LAHRSRQHNNIPLETPPKK--FFEGEMRDILSF------SLIDKSD
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