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CmaCh04G020160 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G020160
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
Genome locationCma_Chr04:12782223..12782905
RNA-Seq ExpressionCmaCh04G020160
SyntenyCmaCh04G020160
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR022546 - Uncharacterised protein family Ycf68


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1835940.1 unnamed protein product [Ananas comosus var. bracteatus]3.3e-7778.28Show/hide
Query:  SEEPSDVPAQ---LIECQHRALLK-------RLGIQASHPVVWYEVSLVR-PAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGN
        SE  S V  Q   LIECQH  L +       RLGIQAS PVVWY V +VR PA     + +KRCVPHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNGN
Subjt:  SEEPSDVPAQ---LIECQHRALLK-------RLGIQASHPVVWYEVSLVR-PAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGN

Query:  DNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        DNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GF RSIGP++THDF V  VPQR LVVLL HTTVGSSTG+K
Subjt:  DNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

KAA0060781.1 hypothetical protein E6C27_scaffold44334G00030 [Cucumis melo var. makuwa]1.5e-9386.93Show/hide
Query:  MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNG
        MRLRIKSLQPKF+EEPS+VPA+LIECQH A+L      ASHPVVWYEV LVRPAKT      +RCVPHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNG
Subjt:  MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNG

Query:  NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGF RSIGP++THDFRV LVPQRLLVVLL HTTVGSSTG+K
Subjt:  NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

KAG8363149.1 hypothetical protein BUALT_BualtMtG0001200 [Buddleja alternifolia]4.7e-7683.82Show/hide
Query:  QHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQL
        +H    K    +A  PVVWY V LVRPAKTA K+ +KRCVPHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQL
Subjt:  QHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQL

Query:  GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        GNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GF RSIGP++THDF VTLVPQRLLV LL HTTVGSSTG+K
Subjt:  GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

PLY62414.1 hypothetical protein LSAT_5X16680 [Lactuca sativa]1.5e-7786.98Show/hide
Query:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK
        + +RLGIQAS PVVWY V LVRPAKTA KQT KRCVPHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQLGNMK
Subjt:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK

Query:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        LESLVIADQHAAVNMYPGP+HT RHTLG+GF RSIGP++THDF V LVPQRLLVVLL HTTV SST +K
Subjt:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

PLY81935.1 hypothetical protein LSAT_5X16200 [Lactuca sativa]2.4e-8089.35Show/hide
Query:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK
        + +RLGIQAS PVVWY V LVRPAKTA KQT KRCVPHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQLGNMK
Subjt:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK

Query:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        LESLVIADQHAAVNMYPGPVHTARHTLG+GF RSIGP++THDF V LVPQRLLVVLL HTTVGSSTG+K
Subjt:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

TrEMBL top hitse value%identityAlignment
A0A2J6JHW2 Uncharacterized protein ycf687.1e-7886.98Show/hide
Query:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK
        + +RLGIQAS PVVWY V LVRPAKTA KQT KRCVPHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQLGNMK
Subjt:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK

Query:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        LESLVIADQHAAVNMYPGP+HT RHTLG+GF RSIGP++THDF V LVPQRLLVVLL HTTV SST +K
Subjt:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

A0A2J6L3N0 Uncharacterized protein ycf681.2e-8089.35Show/hide
Query:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK
        + +RLGIQAS PVVWY V LVRPAKTA KQT KRCVPHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQLGNMK
Subjt:  LLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQLGNMK

Query:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        LESLVIADQHAAVNMYPGPVHTARHTLG+GF RSIGP++THDF V LVPQRLLVVLL HTTVGSSTG+K
Subjt:  LESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

A0A5A7V4U9 Uncharacterized protein ycf687.1e-9486.93Show/hide
Query:  MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNG
        MRLRIKSLQPKF+EEPS+VPA+LIECQH A+L      ASHPVVWYEV LVRPAKT      +RCVPHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNG
Subjt:  MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNG

Query:  NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGF RSIGP++THDFRV LVPQRLLVVLL HTTVGSSTG+K
Subjt:  NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

A0A6V7PYW1 Uncharacterized protein ycf681.6e-7778.28Show/hide
Query:  SEEPSDVPAQ---LIECQHRALLK-------RLGIQASHPVVWYEVSLVR-PAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGN
        SE  S V  Q   LIECQH  L +       RLGIQAS PVVWY V +VR PA     + +KRCVPHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNGN
Subjt:  SEEPSDVPAQ---LIECQHRALLK-------RLGIQASHPVVWYEVSLVR-PAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGN

Query:  DNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        DNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GF RSIGP++THDF V  VPQR LVVLL HTTVGSSTG+K
Subjt:  DNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

S8D505 Uncharacterized protein ycf681.5e-7574.37Show/hide
Query:  MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNG
        MRLR KS QPK +EEPSDVPA LIECQH A+  +                  P K    + +KR VPHSR TASDILEEGGD+VKSAWPLWAGPHTCYNG
Subjt:  MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNG

Query:  NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK
        N NGKQGCKAERIRKDCLSSDCSLQLGNMKL+SLVIA QHAAVNMYPGPVHTARHTLG+GF RSIGP + HDF  TLVPQRLLVVLL HTTVGSSTG+K
Subjt:  NDNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCCTAAGGATCAAGTCTTTGCAACCGAAGTTTTCCGAGGAGCCGAGTGACGTGCCAGCGCAACTAATTGAGTGCCAGCACCGCGCTTTACTAAAAAGACTC
GGCATTCAGGCGAGCCACCCGGTGGTGTGGTACGAAGTGAGTTTAGTACGCCCGGCCAAAACAGCTCTGAAACAAACAAAAAAAAGGTGTGTGCCGCACTCACGA
GGGACTGCTAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATGACAATGGGAAG
CAAGGCTGTAAGGCAGAGCGAATCCGGAAAGATTGTCTCAGTTCAGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATTGCGGATCAGCAT
GCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATGGGTTTCACCCGAAGCATCGGACCAATTCTCACCCATGACTTCCGTGTC
ACACTAGTGCCACAAAGGCTTTTGGTGGTCTTATTGCCGCATACCACGGTGGGGTCTTCGACTGGGATGAAGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCCTAAGGATCAAGTCTTTGCAACCGAAGTTTTCCGAGGAGCCGAGTGACGTGCCAGCGCAACTAATTGAGTGCCAGCACCGCGCTTTACTAAAAAGACTC
GGCATTCAGGCGAGCCACCCGGTGGTGTGGTACGAAGTGAGTTTAGTACGCCCGGCCAAAACAGCTCTGAAACAAACAAAAAAAAGGTGTGTGCCGCACTCACGA
GGGACTGCTAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATGACAATGGGAAG
CAAGGCTGTAAGGCAGAGCGAATCCGGAAAGATTGTCTCAGTTCAGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATTGCGGATCAGCAT
GCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATGGGTTTCACCCGAAGCATCGGACCAATTCTCACCCATGACTTCCGTGTC
ACACTAGTGCCACAAAGGCTTTTGGTGGTCTTATTGCCGCATACCACGGTGGGGTCTTCGACTGGGATGAAGTTGTAA
Protein sequenceShow/hide protein sequence
MRLRIKSLQPKFSEEPSDVPAQLIECQHRALLKRLGIQASHPVVWYEVSLVRPAKTALKQTKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNDNGK
QGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFTRSIGPILTHDFRVTLVPQRLLVVLLPHTTVGSSTGMKL