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CmaCh04G021850 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G021850
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationCma_Chr04:15263961..15264461
RNA-Seq ExpressionCmaCh04G021850
SyntenyCmaCh04G021850
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.4e-4166.88Show/hide
Query:  MNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISFVVSFAGVF
        MNELYSFI A+N RNP I+S           LPICI M+   P NS +T  N+GK I GLTFQAVLALFI+SP S PPLLTHLF AAVLISF VSFAG+F
Subjt:  MNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISFVVSFAGVF

Query:  LQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        LQN FPRIALLF K+ ALIAA+G+ I+AS LL HQ F+WISWL   FSL+AFVLSF+
Subjt:  LQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]6.6e-3152.98Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL
        M S  + +++DMN+      A +G  P         +TA    P        PPP+S QT  NLGKI+ GLTFQAVLALFIS PTS PPLL H+F AA+L
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        ISF +S A +FLQ A+PRIAL  GK+ AL+AA+G   I S LL HQ FSWI WL C F+L+AF+LSFK
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]1.5e-4364.29Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL
        MES S+QI++DMN LYS I ++N RNP I+           GLPICI M+ + P NS +T  N+G  I GLTFQAVLALFI+S TS PPLLTHLFGAAVL
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        ISF VSF GVFLQ+ FPRIALLF K+ ALIAA+G+ I+AS LL HQ F+WISWL C FSL+AF+LSF+
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]4.1e-3355.36Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT-NLGKIIPGLTFQAVLALFISS-PTSYPPLLTHLFGAAVL
        M S S Q +LDM+   SFI  ++ RN G+        T S  LP+ IRM+ SP   +  +  LGKII  L+FQAVLALFISS PTS PPLL H F AAV 
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT-NLGKIIPGLTFQAVLALFISS-PTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        ISF VSFA +FL N+FPR A LF K+ AL +A G+  IASFLL HQ F+WI W+ C FS+I F LSFK
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]4.2e-3067.2Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITW--GTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL
        M S  +Q ++DMN L SFI A+N RN GISS TW  GTST S  LPICIRM+  PP  S Q +LGK I GLTFQAVLALFIS P+S P L T LFGAAVL
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITW--GTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGK
        ISF VSFAG+FLQ A+PR+ALLF K
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein7.3e-4464.29Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL
        MES S+QI++DMN LYS I ++N RNP I+           GLPICI M+ + P NS +T  N+G  I GLTFQAVLALFI+S TS PPLLTHLFGAAVL
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        ISF VSF GVFLQ+ FPRIALLF K+ ALIAA+G+ I+AS LL HQ F+WISWL C FSL+AF+LSF+
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

A0A0A0KJP2 Uncharacterized protein2.0e-3355.36Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT-NLGKIIPGLTFQAVLALFISS-PTSYPPLLTHLFGAAVL
        M S S Q +LDM+   SFI  ++ RN G+        T S  LP+ IRM+ SP   +  +  LGKII  L+FQAVLALFISS PTS PPLL H F AAV 
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT-NLGKIIPGLTFQAVLALFISS-PTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        ISF VSFA +FL N+FPR A LF K+ AL +A G+  IASFLL HQ F+WI W+ C FS+I F LSFK
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.2e-4166.88Show/hide
Query:  MNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISFVVSFAGVF
        MNELYSFI A+N RNP I+S           LPICI M+   P NS +T  N+GK I GLTFQAVLALFI+SP S PPLLTHLF AAVLISF VSFAG+F
Subjt:  MNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQT--NLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISFVVSFAGVF

Query:  LQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        LQN FPRIALLF K+ ALIAA+G+ I+AS LL HQ F+WISWL   FSL+AFVLSF+
Subjt:  LQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter6.6e-2951.52Show/hide
Query:  ESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISF
        E+   +I+LDMNELYSFI A+  RNPGISS TWGT+ AS  LPI I+M+   P NSPQ   G       FQA+L LF++ P S PP L+ L G  +L +F
Subjt:  ESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISF

Query:  VVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK
        V SF GV LQ  FP+IA L     AL+AA+G+ I+ S LL H   +WI WL C   L AF+ SFK
Subjt:  VVSFAGVFLQNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK

A0A6J1CY58 uncharacterized protein LOC1110156582.1e-3067.2Show/hide
Query:  MESCSEQITLDMNELYSFINAMNGRNPGISSITW--GTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL
        M S  +Q ++DMN L SFI A+N RN GISS TW  GTST S  LPICIRM+  PP  S Q +LGK I GLTFQAVLALFIS P+S P L T LFGAAVL
Subjt:  MESCSEQITLDMNELYSFINAMNGRNPGISSITW--GTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVL

Query:  ISFVVSFAGVFLQNAFPRIALLFGK
        ISF VSFAG+FLQ A+PR+ALLF K
Subjt:  ISFVVSFAGVFLQNAFPRIALLFGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCATGTTCAGAGCAAATCACCCTAGATATGAATGAACTATATTCCTTCATCAATGCAATGAATGGAAGAAATCCAGGAATCAGTAGTATTACCTGGGGAACCTC
CACAGCATCGGCTGGCCTTCCAATTTGCATCAGAATGAAGAACTCTCCACCACCCAACAGCCCTCAGACTAATCTTGGGAAGATAATTCCTGGCCTTACTTTTCAGGCAG
TTTTGGCCTTGTTCATCAGTTCACCCACTTCATATCCTCCACTTTTGACACATCTCTTTGGTGCTGCGGTGTTGATAAGCTTCGTAGTTTCATTTGCTGGAGTTTTCCTT
CAAAATGCATTCCCGAGAATTGCACTTTTGTTTGGAAAGCTCAGTGCTCTTATCGCTGCAATGGGTATGTGGATCATAGCAAGTTTTCTTCTAACTCATCAGATTTTCTC
TTGGATCTCTTGGCTGCCATGTGCCTTCTCCTTGATAGCCTTTGTTCTATCATTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCATGTTCAGAGCAAATCACCCTAGATATGAATGAACTATATTCCTTCATCAATGCAATGAATGGAAGAAATCCAGGAATCAGTAGTATTACCTGGGGAACCTC
CACAGCATCGGCTGGCCTTCCAATTTGCATCAGAATGAAGAACTCTCCACCACCCAACAGCCCTCAGACTAATCTTGGGAAGATAATTCCTGGCCTTACTTTTCAGGCAG
TTTTGGCCTTGTTCATCAGTTCACCCACTTCATATCCTCCACTTTTGACACATCTCTTTGGTGCTGCGGTGTTGATAAGCTTCGTAGTTTCATTTGCTGGAGTTTTCCTT
CAAAATGCATTCCCGAGAATTGCACTTTTGTTTGGAAAGCTCAGTGCTCTTATCGCTGCAATGGGTATGTGGATCATAGCAAGTTTTCTTCTAACTCATCAGATTTTCTC
TTGGATCTCTTGGCTGCCATGTGCCTTCTCCTTGATAGCCTTTGTTCTATCATTCAAGTAA
Protein sequenceShow/hide protein sequence
MESCSEQITLDMNELYSFINAMNGRNPGISSITWGTSTASAGLPICIRMKNSPPPNSPQTNLGKIIPGLTFQAVLALFISSPTSYPPLLTHLFGAAVLISFVVSFAGVFL
QNAFPRIALLFGKLSALIAAMGMWIIASFLLTHQIFSWISWLPCAFSLIAFVLSFK