; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G022010 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G022010
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionProtein SIS2
Genome locationCma_Chr04:15374920..15377928
RNA-Seq ExpressionCmaCh04G022010
SyntenyCmaCh04G022010
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601944.1 hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]3.5e-6296.5Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPF   PLVPARA FRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]2.7e-6296.5Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPF   PLVPARAFFRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEISFE KPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

XP_022961614.1 uncharacterized protein LOC111462310 [Cucurbita moschata]1.6e-6296.5Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPF   PLVPARAFFRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

XP_022990673.1 uncharacterized protein LOC111487491 [Cucurbita maxima]2.6e-65100Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE
        MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE
Subjt:  MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE

Query:  LALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]1.0e-5696.97Show/hide
Query:  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTRAFPF   PLVPARAFFRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREA
        EEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREA

TrEMBL top hitse value%identityAlignment
A0A0A0KTR1 Uncharacterized protein1.6e-4481.06Show/hide
Query:  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM
        MAR LISTR FPF   PL P R FFRPS  SP VRF  +PS +RTLRVVTTRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDGSSEISFEEKPALPRTRNRPKREA
        EEDE+ +DG SEISFEEKP +PRTRNRPKREA
Subjt:  EEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1FJ66 uncharacterized protein LOC1114447535.7e-5087.22Show/hide
Query:  MARLLISTRAF----PFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAF      P+ PARAFFRPSKLSPAVRF GD SA +TLR+VTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAF----PFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        MEEDEENKD  S ISFEEKPALPRTRNRPKREA
Subjt:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1HEK5 uncharacterized protein LOC1114623107.7e-6396.5Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
        MASPIPYTSEAMARLLISTRAFPF   PLVPARAFFRPSKLSPAVRFSGDPSAAR LRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF
Subjt:  MASPIPYTSEAMARLLISTRAFPF---PLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKF

Query:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LEELALNQAIMEEDEENKDGSSEI FEEKPALPRTRNRPKREA
Subjt:  LEELALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1JTZ0 uncharacterized protein LOC1114874911.3e-65100Show/hide
Query:  MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE
        MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE
Subjt:  MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE

Query:  LALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        LALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA
Subjt:  LALNQAIMEEDEENKDGSSEISFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896902.8e-4987.22Show/hide
Query:  MARLLISTRAF----PFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI
        MARLLISTRAF      P+VPARA FRPSKLSPAVRF GD SA +TLR+VTTRAGASTSSYIFAFSI FSLILVTALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRAF----PFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREA
        MEEDEENKD  S ISFEEKPALPRTRNRPKREA
Subjt:  MEEDEENKDGSSEISFEEKPALPRTRNRPKREA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1534.1e-1643.8Show/hide
Query:  MARLLISTRAFPFPLVPARAFFRPSKLSPAVRFS--GDPSAARTLRV----VTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQ
        MARL +S    P  +    +  +P    PA  F+  G      T R+    V TRAG STSSY+ AF+IP +LI  T  T++KI D LD+ FLE++ALNQ
Subjt:  MARLLISTRAFPFPLVPARAFFRPSKLSPAVRFS--GDPSAARTLRV----VTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQ

Query:  AIMEEDEENKDGSSEISFE---EKPALPRTRNRPKRE
        AI +  E+ ++G  +IS +   ++P L RTRNRPKRE
Subjt:  AIMEEDEENKDGSSEISFE---EKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGTCCAATTCCTTACACGTCTGAAGCTATGGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCGCTGGTTCCGGCACGAGCATTCTTCAGACCCTCCAA
ATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCAGCCGCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTA
TCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACCGCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAA
GATGAAGAGAACAAAGATGGTAGTTCAGAAATCTCTTTTGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCTAG
mRNA sequenceShow/hide mRNA sequence
AGAGAAGGACGACAAAACAAGGGAAGAAGAGAGAAACGAGAACGTTATCAAAAATTCTCTTTTAATAGATAAAGAGAATTATGAACTCGAGATTACAAGAGGCCAAGCCG
AATTTCATAAAAATGAACTTTGGTTATACATTATCATCACACGCATTTACATGACATCAAATTCAGCCTGCAAGAATGGCCAGTCCAATTCCTTACACGTCTGAAGCTAT
GGCCAGGCTCCTTATCTCCACCAGAGCCTTCCCCTTTCCGCTGGTTCCGGCACGAGCATTCTTCAGACCCTCCAAATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCAT
CAGCCGCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGTGCCAGCACCAGCAGTTACATCTTCGCTTTCTCTATCCCCTTTTCTCTTATTCTCGTCACTGCCCTTACC
GCTCTCAAAATCGGTGATAACCTGGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATAATGGAGGAAGATGAAGAGAACAAAGATGGTAGTTCAGAAATCTC
TTTTGAAGAAAAACCCGCTCTTCCACGAACTCGAAACCGCCCTAAAAGGGAAGCCTAGGTATAAATAGCAGCATAGATTTTGGATGTGAACATGATCGGATCAGACAGGC
AGAAAAAATGGCTCAAAGGAACTAGAAAGCTTCTATGTATACTGTATGTAGCTTAGTTTTCTTCTTCTTCTTAATAATGATTAGTATAAAGTTAGTTTGTATGATGAGTG
AATTTAATGTTTAATATTATTGTTATATATTCTTCAAATTGATATATTTTTAAAAAGCAAATAGTGGTTGATAA
Protein sequenceShow/hide protein sequence
MASPIPYTSEAMARLLISTRAFPFPLVPARAFFRPSKLSPAVRFSGDPSAARTLRVVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEELALNQAIMEE
DEENKDGSSEISFEEKPALPRTRNRPKREA