CuGenDBv2

Gene ID	CmaCh04G022230
Organism	Cucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Description	rRNA-processing protein UTP23 homolog
Genome location	Cma_Chr04:15509120..15513642
RNA-Seq Expression	CmaCh04G022230
Synteny	CmaCh04G022230
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0009793 - embryo development ending in seed dormancy (biological process) GO:0005730 - nucleolus (cellular component) GO:0032040 - small-subunit processome (cellular component)
InterPro domains	IPR006984 - rRNA-processing protein Fcf1/Utp23 IPR029060 - PIN-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7032659.1 rRNA-processing protein UTP23-like protein [Cucurbita argyrosperma subsp. argyrosperma]

5.5e-147

98.23

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLL+KVTKDDEEETE TNEDGDLV KN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
        SEMQVLEKKKKK+GNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG P
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP

XP_022923049.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucurbita moschata]

7.7e-149

100

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG

XP_022923059.1 rRNA-processing protein UTP23 homolog isoform X2 [Cucurbita moschata]

5.5e-147

99.64

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSE KADDNTTKRTRKRKRARKTKTTAETG
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG

XP_022990879.1 rRNA-processing protein UTP23 homolog isoform X1 [Cucurbita maxima]

5.4e-150

100

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP

XP_022990880.1 rRNA-processing protein UTP23 homolog isoform X2 [Cucurbita maxima]

2.9e-148

99.65

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSE KADDNTTKRTRKRKRARKTKTTAETGTP
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CNY6 rRNA-processing protein UTP23 homolog

4.5e-94

70.07

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MR KKQKR R+AVRFYTTC GFR PFK+ CDGTFV+HLLSNQI+PAD A+AK +G RVK+FTTRCVLLELKALG SY+ AFEAAS L TARCDHE RK A
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
          CI++VIG+SN EHFFVATQDT+L+KQLQ+IPGVPLIFGLRN LFMEQP+ ++RQFVKS EEKR H+SE E +LL+K  K    E E TNED DL  +N
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDN--TTKRTRKRKRARKTKTTAETGT
         + QVL   KKK+  L++LKDRPQFKR K KGPNPLSCL  KKKV P+ HPVSEKK DD+    KRTRKRKR+RK K   ET T
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDN--TTKRTRKRKRARKTKTTAETGT

A0A6J1E579 rRNA-processing protein UTP23 homolog isoform X1

3.7e-149

100

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG

A0A6J1E589 rRNA-processing protein UTP23 homolog isoform X2

2.7e-147

99.64

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSE KADDNTTKRTRKRKRARKTKTTAETG
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETG

A0A6J1JRB3 rRNA-processing protein UTP23 homolog isoform X2

1.4e-148

99.65

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSE KADDNTTKRTRKRKRARKTKTTAETGTP
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP

A0A6J1JT87 rRNA-processing protein UTP23 homolog isoform X1

2.6e-150

100

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
        VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKN

Query:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
        SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP
Subjt:  SEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP

SwissProt top hits

e value

%identity

Alignment

O74862 rRNA-processing protein utp23

7.3e-17

30.07

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDH-EIRKH
        MR K+ K +RK +  Y   FGFREP++VL D  F+   LS Q +   AALA+ + G +K   T+C + +L +      +    A +    RC H +    
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDH-EIRKH

Query:  AVTCIMEV--IGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLV
           CI  V  I   N   + VATQD +L++ L+ +PGVPLI+  R+ + +E P +      K ++E        E  LL    K    E  I ++D    
Subjt:  AVTCIMEV--IGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLV

Query:  GKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARK
                  K+        D   +   KRK  KGPNPLS  K+  K      P        +  +R +K +R RK
Subjt:  GKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARK

Q08DU1 rRNA-processing protein UTP23 homolog

7.8e-27

33.21

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        M+  +QK  +K + F+   FG REP+++L DGTF    L  +I   +  L + L    ++ TTRCVL EL+ LG     A   A       C H   K+A
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VT---CIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLV
        V+   C++ ++   N  H+F+ATQD +L  ++++ PG+PL+F ++N + +++P+     FVK+                               E G LV
Subjt:  VT---CIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLV

Query:  GKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTT
          + E Q + + K+++G + D + R + KRKK  GPNPLSCLKKKKK        SEKK         RKRKR R   T+
Subjt:  GKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTT

Q12339 rRNA-processing protein UTP23

1.1e-15

31.36

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIR--K
        MR K+ K +RK +  Y+  F FREP++VL D   V    +N      + L + L   VKV  T+C +  L         A   A      RC+H  +  K
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIR--K

Query:  HAVTCIMEVIGKS--NAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKD-DEEETEITNEDGD
            CI  V+  S  N   + VA+QD DL+++L+ +PGVPLI   R+ + ME  +    +  K +EE             QK+ K  ++   E   E GD
Subjt:  HAVTCIMEVIGKS--NAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKD-DEEETEITNEDGD

Query:  LVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGT
          GK S       KK+K G                K PNPLS +KKKKKV+     V +K+      K+ R+RK    T      GT
Subjt:  LVGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGT

Q9BRU9 rRNA-processing protein UTP23 homolog

4.6e-27

33.82

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        M+  +QK  +K + F+   FG REP+++L DGTF    L  +I   +  L + L G  ++ TTRCVL EL+ LG     A   A       C H   K+A
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VT---CIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLV
        V+   C++ ++ + N  H+FVATQD +L  ++++ PGVPL+F ++N + +++P+     FVK+                               E G LV
Subjt:  VT---CIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLV

Query:  GKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRAR
          + E + ++  K+++G + + +   + KRKK  GPNPLSCLKKKKK    Q   SEKK         RKRKR R
Subjt:  GKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRAR

Q9CX11 rRNA-processing protein UTP23 homolog

1.7e-26

33.69

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDH-EIRKH
        M+  +QK  +K + F+   FG REP+++L DGTF    L  +I   D  L + L G  ++ TTRCVL EL+ LG     A   A       C H +    
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDH-EIRKH

Query:  AVTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGK
           C++ ++ + N  H+FVATQD +L  +++  PG+PL+F ++N + +++P+     FVK+ E                               G LV  
Subjt:  AVTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGK

Query:  NSEMQVLEKKKKKRGNLN--DLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKT
        + E Q +++ K+++G +   DL+ R + K+KK  GPNPLSCLKKKKK    + P SEKK         RKRKR R   T
Subjt:  NSEMQVLEKKKKKRGNLN--DLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKT

Arabidopsis top hits

e value

%identity

Alignment

AT2G34570.1 PIN domain-like family protein

1.1e-63

47.24

Show/hide

Query:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA
        MR K+QK++R+ VRF+T C+GFR+P+KVLCDGTFVHHL++N+I PAD A++++LGG VK+FTTRCV+ EL+ LG  ++++ EAA  L+TA C+HE  K A
Subjt:  MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHA

Query:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLL----QKVTKDDEEETEITNEDGDL
          C+ EVIG  N EHFF+ TQD + +++LQ+   VPL+FGLRN L ++QP+  +RQ  K SE KR  +++ E  LL     K+   + +E  I NE+  +
Subjt:  VTCIMEVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLL----QKVTKDDEEETEITNEDGDL

Query:  VGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKK-------KVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAE
               +V+  K     N   +KDRPQFKR + KGPNPLSC+KKKK       K D N +   EKK   + T++ R RKR++K K+  E
Subjt:  VGKNSEMQVLEKKKKKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKK-------KVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAE

AT2G46230.1 PIN domain-like family protein

2.2e-08

30.77

Show/hide

Query:  PFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTAR--CDHEIRKHAVTCIMEVIGKSNAEHFFVATQD
        P++VL D  F++  + N+I   +  +   L        T CV+ EL+ LG  Y  A   A +    R  C H+   +A  C+++ + +     F VAT D
Subjt:  PFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTAR--CDHEIRKHAVTCIMEVIGKSNAEHFFVATQD

Query:  TDLKKQLQEIPGVPLIF
         DLK+++++IPGVP+++
Subjt:  TDLKKQLQEIPGVPLIF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGATTCAAAAAGCAAAAGCGTCATCGGAAAGCTGTGAGATTCTACACTACATGTTTTGGATTCAGGGAGCCGTTTAAAGTCTTGTGTGATGGAACTTTTGTC
CACCATCTTCTTTCCAATCAAATATTGCCGGCCGATGCTGCCCTTGCTAAAGTTCTTGGTGGCCGAGTCAAGGTTTTCACCACTAGATGTGTACTTTTAGAATTG
AAGGCCCTTGGTCCATCCTACTCTAAAGCTTTTGAGGCAGCTAGTAACCTGTCTACTGCAAGATGTGACCATGAGATAAGAAAACATGCTGTGACATGCATCATG
GAGGTGATTGGTAAATCAAATGCGGAGCATTTTTTTGTTGCCACCCAAGATACTGATCTTAAGAAGCAGCTTCAAGAGATACCTGGGGTCCCACTTATATTTGGT
TTGAGAAATGCACTTTTCATGGAGCAACCAACTGCCTTGGAACGCCAATTTGTTAAATCTTCGGAAGAAAAAAGATCGCATATTTCTGAGGTCGAACTTAATTTG
TTACAGAAAGTAACGAAGGACGACGAAGAGGAAACTGAGATAACTAACGAAGATGGAGATCTGGTAGGCAAAAATTCAGAGATGCAGGTTTTGGAAAAGAAAAAG
AAAAAGAGAGGAAATTTAAATGATTTGAAGGATAGACCTCAATTTAAGAGAAAGAAAACAAAGGGTCCAAACCCTCTTTCGTGTCTGAAGAAGAAGAAAAAGGTC
GATCCAAACCAACATCCAGTTTCAGAGAAGAAGGCTGATGATAATACTACTAAAAGGACTCGCAAACGAAAACGGGCACGAAAGACCAAAACAACTGCTGAGACG
GGCACGCCATAG

mRNA sequence

Show/hide mRNA sequence

CAGTTGCCCTACTATGGGTTGGGCTTAGGATGAACAAGCAACCCAAGGTTTAAGTTTCGGTCATCTCTCTGCTCACTCTCTGATTCCTGTTTCTCTCCGCCGCCG
CGCGCCGGTAACGCCTCCACTGCCACTTTGCTCTGTTCTCTTCTTCTTTGTCTGCTGCAACCGAAGGTTTCCCGGACTAGGCAATACCACGAAAACAGTTGCTGC
AATCGACCAGAATAAGCTCTCCTTGTTCTCAGGATGAGATTCAAAAAGCAAAAGCGTCATCGGAAAGCTGTGAGATTCTACACTACATGTTTTGGATTCAGGGAG
CCGTTTAAAGTCTTGTGTGATGGAACTTTTGTCCACCATCTTCTTTCCAATCAAATATTGCCGGCCGATGCTGCCCTTGCTAAAGTTCTTGGTGGCCGAGTCAAG
GTTTTCACCACTAGATGTGTACTTTTAGAATTGAAGGCCCTTGGTCCATCCTACTCTAAAGCTTTTGAGGCAGCTAGTAACCTGTCTACTGCAAGATGTGACCAT
GAGATAAGAAAACATGCTGTGACATGCATCATGGAGGTGATTGGTAAATCAAATGCGGAGCATTTTTTTGTTGCCACCCAAGATACTGATCTTAAGAAGCAGCTT
CAAGAGATACCTGGGGTCCCACTTATATTTGGTTTGAGAAATGCACTTTTCATGGAGCAACCAACTGCCTTGGAACGCCAATTTGTTAAATCTTCGGAAGAAAAA
AGATCGCATATTTCTGAGGTCGAACTTAATTTGTTACAGAAAGTAACGAAGGACGACGAAGAGGAAACTGAGATAACTAACGAAGATGGAGATCTGGTAGGCAAA
AATTCAGAGATGCAGGTTTTGGAAAAGAAAAAGAAAAAGAGAGGAAATTTAAATGATTTGAAGGATAGACCTCAATTTAAGAGAAAGAAAACAAAGGGTCCAAAC
CCTCTTTCGTGTCTGAAGAAGAAGAAAAAGGTCGATCCAAACCAACATCCAGTTTCAGAGAAGAAGGCTGATGATAATACTACTAAAAGGACTCGCAAACGAAAA
CGGGCACGAAAGACCAAAACAACTGCTGAGACGGGCACGCCATAGTTTGTAGTCATCTGATGTGGCTTTGGTAATTTTTTGGTGCTTTGTGGTAAATGGTAGAAT
GATTTGGTTTTAACGTTTAGAATGCATCCCTAGCAAGAGGATTAGAAGTCTGAAATTAGATGGGAGTTATGGGTGTTCCCTCACGAAGGTGTAGCTTCCATAGAT
AAGGAAATTGTATTATGATAATACCCGTTGCCAACCTAAGCTATAGAGATACAATTTTTTGTTTTCACATGTAGTTGATACTGGTCAATATTTTTCTGTTCTTGC
AAAAGGAAATTGATTCTTTGAACCTCAACGAGACCAGCTGAAAGCGAAAATGGATTGTTTCACCTTGTAAGGCGATTTCTACGCTTTTTTTTTTGCTATTTATTT
GAGTAGGGGTGTGTTTAAGCTAGACAGGTTTTAGGGGCTTTTGCTCCTTTGGGTGAACTTAGATTTAGATTTAGATGTGGCTTTAGTCGTTGATGAACAAATTTA
TTTGTCCATGTGTTTTGGTAAAAGAATCTATCAGTATTTGCTATTGCAGTTGTATATGTTGATTGAAACTCCTGAAGACATCTCGTAAAGCATAATTTTGTTCGC
TCGCTTGTAGAGACAATTTTATTGTGGTTTGAAATTTATGAAAGGG

Protein sequence

Show/hide protein sequence

MRFKKQKRHRKAVRFYTTCFGFREPFKVLCDGTFVHHLLSNQILPADAALAKVLGGRVKVFTTRCVLLELKALGPSYSKAFEAASNLSTARCDHEIRKHAVTCIM
EVIGKSNAEHFFVATQDTDLKKQLQEIPGVPLIFGLRNALFMEQPTALERQFVKSSEEKRSHISEVELNLLQKVTKDDEEETEITNEDGDLVGKNSEMQVLEKKK
KKRGNLNDLKDRPQFKRKKTKGPNPLSCLKKKKKVDPNQHPVSEKKADDNTTKRTRKRKRARKTKTTAETGTP

CmaCh04G022230 (gene) of Cucurbita maxima (Rimu) v1.1 genome