; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G024300 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G024300
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein MKS1-like
Genome locationCma_Chr04:16752025..16752513
RNA-Seq ExpressionCmaCh04G024300
SyntenyCmaCh04G024300
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602164.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.4e-7086.5Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKK-LPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGM
        MAERKHLQLHGHRPSALKISKHSHNIKK  P LPPPPP HRPVIIYTDSPKIIHTNPTQFK+LVQRLT CQ ++PD H VQSKTIS+SMSM TSSTEQG+
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKK-LPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGM

Query:  ESVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        ESVGRFPTGILPP  E L P+MPT PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Subjt:  ESVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

KAG7032856.1 VQ motif-containing protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-7086.42Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME
        MAERKHLQLHGHRPSALKISKHSHNIKK P LPPPP  HRPVIIYTDSPKIIHTNPTQFK+LVQRLT CQ ++PD H VQSKTIS+SMSM TSSTEQG+E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME

Query:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        SVGRFPTGILPP  E L P+MPT PS S DLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Subjt:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

XP_022959576.1 protein MKS1-like [Cucurbita moschata]1.1e-6784.57Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME
        MAERKHLQLHGHRPSALKISKHSHNI+K     PPPP HRPVIIYTDSPKIIHTNPTQFK+LVQRLT CQ ++PD H VQSKTIS+SMSM TSSTEQG+E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME

Query:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        SVG FPTGILPP  E LLP+MP  PSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFP FH
Subjt:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

XP_023542758.1 protein MKS1-like [Cucurbita pepo subsp. pepo]1.6e-6684.57Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME
        MAERKHL LHGHRPSALKISKHSHNIKK P LPPPPP HRPVIIYTDSPKIIHTNPTQFK+LVQRLT  Q NSPD H VQSKTIS+S SM TSSTEQG+E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME

Query:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        S+ RFPTGIL P PEFL       PSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
Subjt:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

XP_038885910.1 protein MKS1-like [Benincasa hispida]5.8e-3256.07Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQ---SNSPDTHPVQSKTISISMSMQTSSTEQ
        M ERK + L G RP+ALKI+K SH IKK P  PP PP HRPVIIYT SPKIIHT PT+FK+LVQRLT  +   SN    HP      S+SMSM T+S +Q
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQ---SNSPDTHPVQSKTISISMSMQTSSTEQ

Query:  GMESVGR---FPT-GILPPMPE--FLLPVMPTQPSASTDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH
        G+E VG     PT G+LPP+    F  P      +A+TD S  T +FQD S IA N+F+SSLDFF  NFPDFH
Subjt:  GMESVGR---FPT-GILPPMPE--FLLPVMPTQPSASTDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein3.9e-2652.2Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLT------SCQSNSP---DTHPVQSKTISISMSMQ
        M E+K LQL G RPSALKI+K SH IKK P LPPP P HRPVIIYT SPKIIHT+PT+FK+LVQRLT      S  SN     D HP     ISI  +  
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLT------SCQSNSP---DTHPVQSKTISISMSMQ

Query:  TSSTEQGMESVGRFPTGILPPMPEFLLPVM-------PTQPSAST--DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH
            + G++ +     GIL P P  L P+        P  P+A+   DL+SLT +F D S IA N+F+SSLDFF  NFPDFH
Subjt:  TSSTEQGMESVGRFPTGILPPMPEFLLPVM-------PTQPSAST--DLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH

A0A5A7UZA1 Protein MKS1-like1.5e-2551.11Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLT------SCQSNSPDTHP-VQSKTISISMSMQTS
        M E+K LQL G RPSALKI+K SH IKK P LPPP P HRPVIIYT SPKIIHT+PTQFK+LVQRLT      S  SN    H       ISI ++    
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLT------SCQSNSPDTHP-VQSKTISISMSMQTS

Query:  STEQGMESVGRFPTGILPPMPEFLLPVMPT---------QPSASTDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH
            G++ +     GIL P P  L P+ PT           +A+ DL+SLT +F D S I  N+F+ SLDFF  NFPDFH
Subjt:  STEQGMESVGRFPTGILPPMPEFLLPVMPT---------QPSASTDLSSLTHYFQD-SSIAPNNFASSLDFF-DNFPDFH

A0A6J1FKV1 protein MKS1-like1.7e-2954.17Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME
        MAERK LQL G RP+ALKI+K SH I K        P HRPVIIYT SPK+IHT+PTQFK+LVQRLT  + +S D+H   + T      M  S+  QG E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME

Query:  SVGRFPTGILPPMPEFLLPV-----MPTQPSASTDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH
         VG    GIL P P  L P+      PT P  S +LS LTH+F+D S IAPN F+ SLDFF NFPD H
Subjt:  SVGRFPTGILPPMPEFLLPV-----MPTQPSASTDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH

A0A6J1H588 protein MKS1-like5.4e-6884.57Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME
        MAERKHLQLHGHRPSALKISKHSHNI+K     PPPP HRPVIIYTDSPKIIHTNPTQFK+LVQRLT CQ ++PD H VQSKTIS+SMSM TSSTEQG+E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME

Query:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH
        SVG FPTGILPP  E LLP+MP  PSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFP FH
Subjt:  SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH

A0A6J1JW33 protein MKS1-like5.5e-2852.38Show/hide
Query:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME
        MAERK +QL G RP+ALKI+K SH I K        P HRPVIIY+ SPK+IHT+PTQFK+LVQRLT  + +S D+H   + T      M  S+   G E
Subjt:  MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGME

Query:  SVGRFPTGILPPMPEFLLPV-----MPTQPSASTDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH
         VG    GIL P P  L P+      PT P  S +LS LTH+F+D S IAPN F+ SLDFF NFPD H
Subjt:  SVGRFPTGILPPMPEFLLPV-----MPTQPSASTDLSSLTHYFQD-SSIAPNNFASSLDFFDNFPDFH

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B2.8e-0535.19Show/hide
Query:  GHRPSALKISKHSHNIKKLPQLPPPPPHHR-----------------PVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTS
        G +P+ LK+   SH I K P L PP P  +                 PV IYT +P+IIHT+P  F  LVQRLT   S S  +    S T     +    
Subjt:  GHRPSALKISKHSHNIKKLPQLPPPPPHHR-----------------PVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTS

Query:  STEQGMES
         T  G+ S
Subjt:  STEQGMES

Q8LGD5 Protein MKS15.5e-0930.23Show/hide
Query:  ERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPH---------HRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSN-----------SPDTHPVQSK
        +++ LQ+ G RPS L + K SH IKK P+ P PPP+           PV+IY  SPK++H   ++F  +VQRLT   S            SP      ++
Subjt:  ERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPH---------HRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSN-----------SPDTHPVQSK

Query:  TISISMSMQTSSTEQGME---------SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAP
          S     + ++ ++ +E           G +  GIL P P  L       P+AST + S   Y Q    +P
Subjt:  TISISMSMQTSSTEQGME---------SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAP

Q9CA36 VQ motif-containing protein 8, chloroplastic3.0e-0752.38Show/hide
Query:  QLHGHRPSALKISKHSHNIKKLPQLPPPP-PHHR--PVIIYTDSPKIIHTNPTQFKELVQRLT
        +++G RPS+LK++  SH IKK       P PH R  PVIIY  SPK+IHT    F  LVQRLT
Subjt:  QLHGHRPSALKISKHSHNIKKLPQLPPPP-PHHR--PVIIYTDSPKIIHTNPTQFKELVQRLT

Q9LS54 VQ motif-containing protein 204.3e-0639.05Show/hide
Query:  PSALKISKHSHNIKKLPQLPPPP--------PHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPD-------THPVQSKTISISMSMQTSSTEQG
        P  LK++K SH IKK    PP P        P H PVIIYT +P+IIHTNP  F  LVQ+LT    +  D       T P   K+I+ ++S  T   +  
Subjt:  PSALKISKHSHNIKKLPQLPPPP--------PHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPD-------THPVQSKTISISMSMQTSSTEQG

Query:  MESVG
            G
Subjt:  MESVG

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding2.0e-0635.19Show/hide
Query:  GHRPSALKISKHSHNIKKLPQLPPPPPHHR-----------------PVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTS
        G +P+ LK+   SH I K P L PP P  +                 PV IYT +P+IIHT+P  F  LVQRLT   S S  +    S T     +    
Subjt:  GHRPSALKISKHSHNIKKLPQLPPPPPHHR-----------------PVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTS

Query:  STEQGMES
         T  G+ S
Subjt:  STEQGMES

AT1G21326.1 VQ motif-containing protein8.1e-0837.96Show/hide
Query:  GHRPSALKISKHSHNIKKLPQLPPPPPHHR-----------------PVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTS
        G RP  LK+   SH I K P L PP P  +                 PVIIYT SP+IIHT+P  F  LVQRLT   S S  +    S T +   +    
Subjt:  GHRPSALKISKHSHNIKKLPQLPPPPPHHR-----------------PVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTS

Query:  STEQGMES
         T  G+ S
Subjt:  STEQGMES

AT1G68450.1 VQ motif-containing protein2.1e-0852.38Show/hide
Query:  QLHGHRPSALKISKHSHNIKKLPQLPPPP-PHHR--PVIIYTDSPKIIHTNPTQFKELVQRLT
        +++G RPS+LK++  SH IKK       P PH R  PVIIY  SPK+IHT    F  LVQRLT
Subjt:  QLHGHRPSALKISKHSHNIKKLPQLPPPP-PHHR--PVIIYTDSPKIIHTNPTQFKELVQRLT

AT3G18360.1 VQ motif-containing protein3.1e-0739.05Show/hide
Query:  PSALKISKHSHNIKKLPQLPPPP--------PHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPD-------THPVQSKTISISMSMQTSSTEQG
        P  LK++K SH IKK    PP P        P H PVIIYT +P+IIHTNP  F  LVQ+LT    +  D       T P   K+I+ ++S  T   +  
Subjt:  PSALKISKHSHNIKKLPQLPPPP--------PHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPD-------THPVQSKTISISMSMQTSSTEQG

Query:  MESVG
            G
Subjt:  MESVG

AT3G18690.1 MAP kinase substrate 13.9e-1030.23Show/hide
Query:  ERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPH---------HRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSN-----------SPDTHPVQSK
        +++ LQ+ G RPS L + K SH IKK P+ P PPP+           PV+IY  SPK++H   ++F  +VQRLT   S            SP      ++
Subjt:  ERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPH---------HRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSN-----------SPDTHPVQSK

Query:  TISISMSMQTSSTEQGME---------SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAP
          S     + ++ ++ +E           G +  GIL P P  L       P+AST + S   Y Q    +P
Subjt:  TISISMSMQTSSTEQGME---------SVGRFPTGILPPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCTGCCGCAGCTCCCCCCACCACCACC
GCACCACCGCCCTGTCATAATCTACACCGACTCCCCCAAGATAATCCACACCAATCCTACCCAATTCAAGGAATTGGTCCAACGTCTCACTAGCTGCCAATCTAATAGTC
CTGATACTCATCCGGTCCAATCCAAGACAATATCAATATCTATGTCGATGCAAACGAGTAGTACCGAACAAGGAATGGAGAGTGTAGGTCGTTTCCCAACCGGGATATTA
CCGCCGATGCCGGAGTTTCTACTGCCCGTCATGCCGACGCAGCCGTCGGCGTCAACTGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGCTCCATAGCTCCTAATAA
TTTTGCATCGTCGCTAGATTTCTTCGACAACTTCCCTGATTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAAAGAAAACACCTTCAACTCCATGGCCACCGCCCCTCCGCCCTCAAAATCTCCAAACACTCCCACAATATCAAAAAGCTGCCGCAGCTCCCCCCACCACCACC
GCACCACCGCCCTGTCATAATCTACACCGACTCCCCCAAGATAATCCACACCAATCCTACCCAATTCAAGGAATTGGTCCAACGTCTCACTAGCTGCCAATCTAATAGTC
CTGATACTCATCCGGTCCAATCCAAGACAATATCAATATCTATGTCGATGCAAACGAGTAGTACCGAACAAGGAATGGAGAGTGTAGGTCGTTTCCCAACCGGGATATTA
CCGCCGATGCCGGAGTTTCTACTGCCCGTCATGCCGACGCAGCCGTCGGCGTCAACTGATCTCAGCTCTCTCACCCACTACTTCCAAGACAGCTCCATAGCTCCTAATAA
TTTTGCATCGTCGCTAGATTTCTTCGACAACTTCCCTGATTTTCATTAA
Protein sequenceShow/hide protein sequence
MAERKHLQLHGHRPSALKISKHSHNIKKLPQLPPPPPHHRPVIIYTDSPKIIHTNPTQFKELVQRLTSCQSNSPDTHPVQSKTISISMSMQTSSTEQGMESVGRFPTGIL
PPMPEFLLPVMPTQPSASTDLSSLTHYFQDSSIAPNNFASSLDFFDNFPDFH