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CmaCh04G024380 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G024380
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRRM domain-containing protein
Genome locationCma_Chr04:16785635..16785931
RNA-Seq ExpressionCmaCh04G024380
SyntenyCmaCh04G024380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5525233.1 hypothetical protein RHGRI_031789 [Rhododendron griersonianum]6.9e-0438.61Show/hide
Query:  MDEKMKSMGCALVFSLLIALVSLNLPSQFSASYLHYPSPSPTKSPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSK----LRKRDPWPPNFVEQSPPP
        M  K  SM  +L   LL+A+VS++LPSQ SA+Y HY SP P     +    P  +H+   P P P  K     P P K     +   P PP +  +SPPP
Subjt:  MDEKMKSMGCALVFSLLIALVSLNLPSQFSASYLHYPSPSPTKSPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSK----LRKRDPWPPNFVEQSPPP

Query:  P
        P
Subjt:  P
KAG6602172.1 hypothetical protein SDJN03_07405, partial [Cucurbita argyrosperma subsp. sororia]3.4e-4390.82Show/hide
Query:  MDEKMKSMGCALVFSLLIALVSLNLPSQFSASYLHYPSPSPTKSPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSKLRKRDPWPPNFVEQSPPPPF
        MDEK+++MGC LVFSL+IALVSLNL SQFSASYLHYPSPSPTKSPVADHT+PL FHFVHTPMPYPTKKLVEDAPAPSKLRKRDPWPPNFV QSPPPPF
Subjt:  MDEKMKSMGCALVFSLLIALVSLNLPSQFSASYLHYPSPSPTKSPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSKLRKRDPWPPNFVEQSPPPPF
TrEMBL top hitse value%identityAlignment
A0A0A0KCN5 RRM domain-containing protein3.6e-0641.05Show/hide
Query:  VFSLLIALVSLNLPSQFSASYLHYPSPSPTK---------SPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSKLRKRDPWPPNFVEQSPPPPF
        V SLL+ALVSLNLPS+FSA+Y HYP P P K          P     +  +F FV+ P+P P++K  E  P P   + + P  P+     P  PF
Subjt:  VFSLLIALVSLNLPSQFSASYLHYPSPSPTK---------SPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSKLRKRDPWPPNFVEQSPPPPF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGAAAATGAAGAGCATGGGTTGTGCATTGGTGTTCTCCCTTCTCATTGCTTTGGTCTCTTTGAATCTGCCATCACAATTTAGTGCATCATATCTTCATTATCC
ATCTCCTTCACCAACCAAGTCGCCTGTTGCTGACCATACTGTTCCCCTTCATTTTCATTTTGTACATACGCCAATGCCATACCCAACCAAAAAGCTTGTTGAAGATGCCC
CCGCGCCGTCTAAGTTAAGAAAACGCGATCCTTGGCCACCCAATTTCGTCGAGCAATCGCCTCCACCTCCTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGAAAATGAAGAGCATGGGTTGTGCATTGGTGTTCTCCCTTCTCATTGCTTTGGTCTCTTTGAATCTGCCATCACAATTTAGTGCATCATATCTTCATTATCC
ATCTCCTTCACCAACCAAGTCGCCTGTTGCTGACCATACTGTTCCCCTTCATTTTCATTTTGTACATACGCCAATGCCATACCCAACCAAAAAGCTTGTTGAAGATGCCC
CCGCGCCGTCTAAGTTAAGAAAACGCGATCCTTGGCCACCCAATTTCGTCGAGCAATCGCCTCCACCTCCTTTCTAA
Protein sequenceShow/hide protein sequence
MDEKMKSMGCALVFSLLIALVSLNLPSQFSASYLHYPSPSPTKSPVADHTVPLHFHFVHTPMPYPTKKLVEDAPAPSKLRKRDPWPPNFVEQSPPPPF