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CmaCh04G024700 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G024700
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionNucleolar protein 16, putative
Genome locationCma_Chr04:16969226..16969660
RNA-Seq ExpressionCmaCh04G024700
SyntenyCmaCh04G024700
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656615.1 uncharacterized protein LOC105435757 [Cucumis sativus]9.6e-6386.11Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQ ++HSSQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNT     TEPEN NDEMFFSREQ+A
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
        ++W KNILMGGKCQLPDFSGVILYD NGN VTPA+T  PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

XP_022959632.1 uncharacterized protein LOC111460648 [Cucurbita moschata]7.1e-7496.53Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNA EPEN NDEMFFSREQRA
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
         VWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQ PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

XP_022990795.1 uncharacterized protein LOC111487577 [Cucurbita maxima]3.1e-77100Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
        TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

XP_023512486.1 uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo]3.8e-7597.92Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPEN NDEMFFSREQRA
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
         VWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQ PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

XP_038886392.1 uncharacterized protein LOC120076591 [Benincasa hispida]8.4e-6788.89Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQ MMH SQATAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATV+TTQRVN CVVNATE EN NDEMFFSREQ+A
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
         +W+KNILMGGKCQLPDFSGVILYD NGN VTPA+T  PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

TrEMBL top hitse value%identityAlignment
A0A0A0K8P1 Uncharacterized protein4.6e-6386.11Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQ ++HSSQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNT     TEPEN NDEMFFSREQ+A
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
        ++W KNILMGGKCQLPDFSGVILYD NGN VTPA+T  PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

A0A1S3C3W7 uncharacterized protein LOC1034965803.9e-6284.72Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQ ++HSSQ T QVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTT +     VNATEPENDN+EMFFSREQ+A
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
        ++W KNILMGGKCQLPDFSGVILYD NGNVVTPA+T  PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

A0A5A7SQ79 Putative Nucleolar protein 163.9e-6284.72Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQ ++HSSQ T QVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTT +     VNATEPENDN+EMFFSREQ+A
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
        ++W KNILMGGKCQLPDFSGVILYD NGNVVTPA+T  PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

A0A6J1H530 uncharacterized protein LOC1114606483.4e-7496.53Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNA EPEN NDEMFFSREQRA
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
         VWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQ PLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

A0A6J1JR28 uncharacterized protein LOC1114875771.5e-77100Show/hide
Query:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
        MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA
Subjt:  MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRA

Query:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
        TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK
Subjt:  TVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49000.1 unknown protein9.4e-0842.59Show/hide
Query:  ENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFP
        +N  +E   + E+   +W++ ILMGGKC+  DFSGVI YDSNG ++     + P
Subjt:  ENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSGVILYDSNGNVVTPARTQFP

AT1G71740.1 unknown protein1.4e-2244.53Show/hide
Query:  QVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLP
        ++G+A AS+      L   ASH+++  RRW AC  YG    +PVI L  + T++    V        E   D   +    ++R  +W+KNILMGGKCQLP
Subjt:  QVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLP

Query:  DFSGVILYDSNGNVVTPARTQFPLLTWK
        DFSGVILYD++G VV PA+   PLLTWK
Subjt:  DFSGVILYDSNGNVVTPARTQFPLLTWK

AT3G14760.1 unknown protein4.4e-0564.29Show/hide
Query:  VWEKNILMGGKCQLPDFSGVILYDSNGN
        VW++ ILMG KC+LP FSG+ILYD  G+
Subjt:  VWEKNILMGGKCQLPDFSGVILYDSNGN

AT3G18560.1 unknown protein2.6e-0554.55Show/hide
Query:  EQRATVWEKNILMGGKCQLPDFSGVILYDSNGN
        E+   VW++ ILMGGKC+  D+SGVI YD +G+
Subjt:  EQRATVWEKNILMGGKCQLPDFSGVILYDSNGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTC
CCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTAGTGACTACGCAAC
GAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGACAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTACTGTATGGGAGAAGAACATACTCATGGGT
GGGAAGTGTCAACTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGTTTCCTCTACTCACCTGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGGCAACTACAAATGATGATGCATTCTTCACAAGCCACAGCTCAGGTTGGCATGGCTGGTGCGAGCCTTCTCTTGTGTGCTTTTGCATTGTTTATGTGTGCTTC
CCATGCTCGGAAATGGCGTCGTCGCTGGAATGCTTGCTTGGATTATGGCTATGAGTTTGAGGATCCTGTAATAGAGCTTAACCAAGAAGCGACAGTAGTGACTACGCAAC
GAGTGAATACCTGTGTTGTGAATGCCACCGAGCCGGAGAATGACAACGACGAGATGTTCTTCAGCAGAGAGCAACGAGCTACTGTATGGGAGAAGAACATACTCATGGGT
GGGAAGTGTCAACTACCGGACTTCTCGGGCGTCATATTATACGACTCCAATGGAAACGTCGTAACCCCTGCTAGAACTCAGTTTCCTCTACTCACCTGGAAGTGA
Protein sequenceShow/hide protein sequence
MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMG
GKCQLPDFSGVILYDSNGNVVTPARTQFPLLTWK