; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G024740 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G024740
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionWD repeat protein
Genome locationCma_Chr04:16983424..16987012
RNA-Seq ExpressionCmaCh04G024740
SyntenyCmaCh04G024740
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602211.1 hypothetical protein SDJN03_07444, partial [Cucurbita argyrosperma subsp. sororia]7.6e-10397.45Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQS SEIREIEETSSNSEL+ LLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITI+ITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]2.2e-9491.15Show/hide
Query:  QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022960369.1 uncharacterized protein LOC111461110 [Cucurbita moschata]4.9e-10296.94Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITI+ITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]1.6e-105100Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]7.6e-10397.45Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQS N SSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVF VAIITI+ITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

TrEMBL top hitse value%identityAlignment
A0A0A0K9G4 Uncharacterized protein2.0e-9389.58Show/hide
Query:  QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL++ NPSSNS++VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC1034965711.1e-9491.15Show/hide
Query:  QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSE+EIRE++ET+S SELQPLL++QNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT L  SR+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  NGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC1110067351.2e-9087.69Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        ME+ Q+ESEIREIEET SNSE QPLLQSQNPSS+S+ VKTKVPEVEIHLYRQGKGPIDVFKSSLGGW+QDQLE+REILDKYGFKS FAFKP++GRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKP+TRI+F VAI+TILIT L  SR SQG MKKLNI+GNFPPWILACVVIVFTRSRKRTRDLLKK+G
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC1114611102.4e-10296.94Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNS+TVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYR GAEIYIDGEPKDSLIKPVT IVFVVAIITI+ITLLSTSR+SQGWMK LNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC1114873207.9e-106100Show/hide
Query:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
        MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR
Subjt:  MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIR

Query:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
Subjt:  FNPRNGRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G71780.1 unknown protein6.7e-6563.83Show/hide
Query:  REIEETSSNSELQPLLQSQNPSS--NSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +EIEET+      PLL++  P S   S T   KVPEVEIHLY+ GKGPIDVFKS+LGG+EQDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REIEETSSNSELQPLLQSQNPSS--NSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW
        +L YRDGA IYIDGEP+DSL+KP+TRI+  V I+T+LIT L   ++   W+K     G FPPW+LAC+VIVFTR+RKRTRD  KKYGW
Subjt:  ILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATCATCAGAGCGAGAGCGAAATCCGTGAAATTGAAGAAACCAGCTCGAACTCAGAGCTGCAACCTCTTCTTCAGAGCCAGAACCCGAGTTCGAATTCC
AGAACAGTGAAGACGAAGGTTCCGGAGGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGAACAAGAC
CAGCTCGAGGTCCGAGAGATTCTCGATAAATACGGCTTCAAAAGCGTTTTCGCCTTCAAACCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAAT
GGTAGGTCTATATTGACTTACAGAGATGGAGCCGAAATTTACATCGACGGAGAGCCCAAGGATTCCCTGATCAAACCCGTAACCCGGATAGTTTTTGTCGTGGCA
ATTATCACCATTTTGATAACGCTTCTCTCGACCTCAAGAAACTCACAGGGATGGATGAAGAAACTAAACATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGC
GTCGTTATCGTCTTCACACGCTCAAGGAAGAGAACCAGGGACTTGCTAAAGAAGTACGGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAACGATATTTTATATTAGCTGGTTGGAACAAACAAAATCCATTACCGTACATCAAAAACATTGCGCGAAATGGAGGATCATCAGAGCGAGAGCGA
AATCCGTGAAATTGAAGAAACCAGCTCGAACTCAGAGCTGCAACCTCTTCTTCAGAGCCAGAACCCGAGTTCGAATTCCAGAACAGTGAAGACGAAGGTTCCGGA
GGTTGAGATCCATCTTTATCGGCAGGGCAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGGGGTTGGGAACAAGACCAGCTCGAGGTCCGAGAGATTCTCGA
TAAATACGGCTTCAAAAGCGTTTTCGCCTTCAAACCTGACTCCGGTCGTGGCGTCCCGATTCGATTCAACCCTAGAAATGGTAGGTCTATATTGACTTACAGAGA
TGGAGCCGAAATTTACATCGACGGAGAGCCCAAGGATTCCCTGATCAAACCCGTAACCCGGATAGTTTTTGTCGTGGCAATTATCACCATTTTGATAACGCTTCT
CTCGACCTCAAGAAACTCACAGGGATGGATGAAGAAACTAAACATCACTGGGAACTTCCCTCCTTGGATTCTTGCTTGCGTCGTTATCGTCTTCACACGCTCAAG
GAAGAGAACCAGGGACTTGCTAAAGAAGTACGGTTGGTGAATCTCATTCTCCAGGCCTTCCTATGTTGATTATGGAAGGTAAAATTAATGTCTTAAGTTGATTAT
TGTTTCTTGATTTGAAACTTTGGAAATAGAAGATAATGATACAATACAAATGGAACGTTCTTGGTCCATTGCTATCATAAATTCCCTGCCTGGATCTTGATCTTT
TGACGTAATGAGTTATTATATAGTTTGGATTTATGTGTAT
Protein sequenceShow/hide protein sequence
MEDHQSESEIREIEETSSNSELQPLLQSQNPSSNSRTVKTKVPEVEIHLYRQGKGPIDVFKSSLGGWEQDQLEVREILDKYGFKSVFAFKPDSGRGVPIRFNPRN
GRSILTYRDGAEIYIDGEPKDSLIKPVTRIVFVVAIITILITLLSTSRNSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTRDLLKKYGW