; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmaCh04G025310 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G025310
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionRRM domain-containing protein
Genome locationCma_Chr04:17339662..17342488
RNA-Seq ExpressionCmaCh04G025310
SyntenyCmaCh04G025310
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602267.1 MKI67 FHA domain-interacting nucleolar phosphoprotein-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-11197.17Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKLSKATSLISN+ ESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEFD
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERK+HNKERTLGEHRKLVERILKRNQARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKF ED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]7.4e-11296.7Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKL+KATSL+SN+ ESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEFD
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERK+HNKERTLGEHRKLVERILKRNQARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022990457.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]4.2e-115100Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_023525015.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Cucurbita pepo subsp. pepo]6.3e-11196.23Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKL+KATSL+SN+ ESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEFD
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERK+ NKERTLGEHRKLVERILKRNQARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]6.1e-10691.98Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKLSKATSL  ++ ESADFLPLEGGPGRKLPAQKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEF+
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RI+KR+QARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein1.0e-10390.09Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKA+KAMKKKL+KAT L S++ ESADFLPLEGGPGRKL  QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGY+EF+
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAA IDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c6.5e-10691.51Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKL KAT L S++ ESADFLPLEGGPGRKLP QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRH PLNWSELERK+HNKERTL EH+KLV+RILKR+QARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like3.6e-11296.7Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKL+KATSL+SN+ ESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYIEFD
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERK+HNKERTLGEHRKLVERILKRNQARQKRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JIS9 uncharacterized RNA-binding protein C1827.05c-like2.0e-115100Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like1.6e-10489.62Show/hide
Query:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD
        MGAKAKKAMKKKLSKATS +S++ ESADFLPLEGGPGRKLPAQKPLE+TATVLYI RIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKS+HFGYIEF+
Subjt:  MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFD

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
        SPEVAKIVADSMHNYLLYEH+LKVHLI+PEHVHPKLWKGFNYRH PL+WSELERK+HNKERTL EH+KLVERILKR+QAR+KRIRAA IDYECPEIVGSV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c3.8e-2638.06Show/hide
Query:  RKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        +K+   K L+    VLY+ R+PHGF+EK+M  +F QFG V RLR++RN+KTG SKH+ +IEF+S +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYE
        KG +     +  + + R +H K  +  +  KL+ R  ++ + ++++++   I  E
Subjt:  KGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein2.4e-2537.89Show/hide
Query:  RKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW
        R    Q+  + T  V+Y+  +P   +E ++  +F QFG V R R++R+KKTG SK +G++EF+S +VAKI A++M+NYL  E +LK H I PE VH +L+
Subjt:  RKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW

Query:  KGFNYRHIPLNWSELER-KRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIV
        + +   H+P         KR+N+ R+L +  ++ ER  K+ +  +KR+    IDY  P +V
Subjt:  KGFNYRHIPLNWSELER-KRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like4.2e-2541.96Show/hide
Query:  VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSE
        V+YI  IP   +E ++  +F QFG V RLR++R+KKTG SK + Y+EF+  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   +      ++
Subjt:  VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSE

Query:  LERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECP
            R+NK R+  E +K+ +R+L +    +KR+    IDY+ P
Subjt:  LERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like1.2e-2441.1Show/hide
Query:  TATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLN
        T  V+YI  IP    E +++ +F QFG V RLR++R+KKTG SK + Y+E++  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G N R     
Subjt:  TATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLN

Query:  WSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECP
         ++    R+N +R   E +K+ +R++ +    +KR+    IDY+ P
Subjt:  WSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein8.4e-2641.83Show/hide
Query:  VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW----KGFNYRHIPL
        VLY+  +P G FE +++ +F QFGKV RLR++R+KKTG SK +G++EF+  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+     GF     P 
Subjt:  VLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLW----KGFNYRHIPL

Query:  NWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV
                R+NK  T  + +K+  ++L +    +KR+ A  IDY+ P     +
Subjt:  NWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSV

Arabidopsis top hitse value%identityAlignment
AT1G03457.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-0635.16Show/hide
Query:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL
        G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG SK FG+I +DS   A+   ++M+   L    LKV L
Subjt:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL

AT1G03457.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-0635.16Show/hide
Query:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL
        G  +P+    E  A   L+I  IP  F ++E+   F  FGKV   ++  +K TG SK FG+I +DS   A+   ++M+   L    LKV L
Subjt:  GRKLPAQKPLESTATV-LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHL

AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-0627.88Show/hide
Query:  LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSEL
        +Y+  IP    E +++GF G  G+V  +RI R K +G  K + ++ F S ++A    D+++N       +K      +H   +L+ G    ++P NW E 
Subjt:  LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSEL

Query:  ERKR
        + K+
Subjt:  ERKR

AT3G52660.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.5e-0627.88Show/hide
Query:  LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSEL
        +Y+  IP    E +++GF G  G+V  +RI R K +G  K + ++ F S ++A    D+++N       +K      +H   +L+ G    ++P NW E 
Subjt:  LYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSEL

Query:  ERKR
        + K+
Subjt:  ERKR

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-7059.28Show/hide
Query:  MGAKAKKAMKKKLSKATS--------LISNQTESADFLPLEGGPGRKLP-AQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKAKKA+KK + K  +        L  N   SADFLPLEGGP RK P    PL++ ATVLYI RIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKAKKAMKKKLSKATS--------LISNQTESADFLPLEGGPGRKLP-AQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  KHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDY
        KHFG+I+F+ PEVA+I A +M++YLL EH+LKVH+I PE+V P LW+GF     P++  ++ER++ NKERTL EHRK++++I+K++Q R+KRI AA I+Y
Subjt:  KHFGYIEFDSPEVAKIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDY

Query:  ECPEIVGSVQPTPKKIKFDED
        ECPE+VG+ QP PK+IKF E+
Subjt:  ECPEIVGSVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAGTAAGGCTACTTCTCTGATATCCAACCAGACGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGT
CCTGGGCGTAAGTTACCGGCCCAAAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGCTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTT
TTCGGACAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGGAATAAAAAAACTGGGAAATCGAAGCATTTTGGCTACATTGAGTTCGATTCTCCAGAGGTGGCA
AAAATTGTAGCTGATTCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTTCATCTAATTGCTCCCGAACATGTTCATCCTAAACTATGGAAAGGTTTT
AACTATCGCCACATTCCCTTAAACTGGTCTGAACTTGAACGTAAAAGGCATAACAAGGAAAGGACATTGGGTGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAG
CGGAATCAGGCTAGACAGAAGAGGATAAGAGCTGCTAGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGCGTCCAACCAACTCCCAAGAAGATCAAGTTTGAT
GAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ACATTGTTCACTTTCCGCTTACAATTTGCTGTGTCTGCACCGATAAGTTCGTGGCAGTTTAGGGAATTCTAGGGTTTGATTCCCTTTTGCTTGAATTCAATGGGG
GCTAAGGCGAAGAAAGCTATGAAGAAGAAACTCAGTAAGGCTACTTCTCTGATATCCAACCAGACGGAATCTGCCGATTTCTTGCCATTGGAGGGTGGTCCTGGG
CGTAAGTTACCGGCCCAAAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGCTCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGA
CAGTTTGGGAAAGTCAAAAGATTAAGAATTGCACGGAATAAAAAAACTGGGAAATCGAAGCATTTTGGCTACATTGAGTTCGATTCTCCAGAGGTGGCAAAAATT
GTAGCTGATTCTATGCATAACTATTTGTTGTACGAACACATTCTGAAAGTTCATCTAATTGCTCCCGAACATGTTCATCCTAAACTATGGAAAGGTTTTAACTAT
CGCCACATTCCCTTAAACTGGTCTGAACTTGAACGTAAAAGGCATAACAAGGAAAGGACATTGGGTGAGCACAGGAAGTTGGTGGAGAGGATCTTGAAGCGGAAT
CAGGCTAGACAGAAGAGGATAAGAGCTGCTAGGATTGATTACGAGTGCCCAGAAATTGTGGGTAGCGTCCAACCAACTCCCAAGAAGATCAAGTTTGATGAAGAT
TAGAACGAGCGTGGAGTTCATTAAAGCTATAATAGTGTCATAATAGAGAGGAAGGATGGAAGAATGATGAGCCAGCCATTGCATCTTTCCAATTTCTTATATGCT
CTGGGAGGTAACCTTCTTGAATCTCCAAATTTTGATCTTTGATGAAATTTTGTGTTGAACCCTTTTGTTTCTAAGAAACAGGAACTGGAATAGTATATTGTATGA
TGCCTATAAATGATAATCTTTAAAGTAGTTTAGCCATTATGACTTGACTAATTCAAAGTACTTGCCATGCCATTATGAACCCTACGGTTTCATATGATAACCTTT
TAGTTTTTGAAAA
Protein sequenceShow/hide protein sequence
MGAKAKKAMKKKLSKATSLISNQTESADFLPLEGGPGRKLPAQKPLESTATVLYIARIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYIEFDSPEVA
KIVADSMHNYLLYEHILKVHLIAPEHVHPKLWKGFNYRHIPLNWSELERKRHNKERTLGEHRKLVERILKRNQARQKRIRAARIDYECPEIVGSVQPTPKKIKFD
ED