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CmaCh04G026700 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G026700
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionCopine domain-containing protein
Genome locationCma_Chr04:18128333..18128752
RNA-Seq ExpressionCmaCh04G026700
SyntenyCmaCh04G026700
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655383.1 uncharacterized protein LOC105435522 [Cucumis sativus]1.6e-3868.42Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRR--GEERRRRFVGRSKRWFKIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKR
        M DL+ TA  GKFRYRRLRYSEEFEEAFGRSR   GE  R+R+  R + WF++R        SIGRRLKKLR+PSLRKLLRRK RLV AM+GSI+KVVKR
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRR--GEERRRRFVGRSKRWFKIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKR

Query:  FREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS-------ALPNFAPTYSL
        FR+GEAYLGDLFAGNYLFLQVNPSS+KC KNHH         + NF  TYSL
Subjt:  FREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS-------ALPNFAPTYSL

XP_022922294.1 uncharacterized protein LOC111430312 [Cucurbita moschata]5.8e-6595.71Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE-ERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAY
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE  RRRRFVGRSKRWF+IRRASIGRRLKKLRVPSLRKLLRRKSRLVTAM+GSI+KVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE-ERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSAL NFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL

XP_022990096.1 uncharacterized protein LOC111487096 [Cucurbita maxima]6.6e-69100Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL

Query:  GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
        GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
Subjt:  GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL

XP_023551709.1 uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo]3.4e-6595.68Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL
        MPDLDTTA PGKFRYRRLRYSEEFEEAFGRSR GEERRRRFVGRSKRWF+IRRASIGRRLKKLRVPSLRKLLRRKSRLVTAM+GSI+KVVKRFREGEAYL
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL

Query:  GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
        GDLFAGNYLFLQVNPSSIKCHKNHHSAL NFAPTYSLNL
Subjt:  GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL

XP_038889218.1 uncharacterized protein LOC120079105 [Benincasa hispida]4.3e-4476.26Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRA-SIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAY
        M DL+ TAP  KFRYRRL YSEEFEEAFGR R GE    R + RSKRWF+IR+A SIGRRLKKLR+PSLRKLLRRKS+LV AM+GSISK++KRFR+GEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRA-SIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHS-ALPNFAPTYSL
        LGDLFAGNYLFLQVNPSS+KC KNHH   L NF  TYSL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHS-ALPNFAPTYSL

TrEMBL top hitse value%identityAlignment
A0A0A0KSD1 Uncharacterized protein7.7e-3968.42Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRR--GEERRRRFVGRSKRWFKIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKR
        M DL+ TA  GKFRYRRLRYSEEFEEAFGRSR   GE  R+R+  R + WF++R        SIGRRLKKLR+PSLRKLLRRK RLV AM+GSI+KVVKR
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRR--GEERRRRFVGRSKRWFKIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKR

Query:  FREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS-------ALPNFAPTYSL
        FR+GEAYLGDLFAGNYLFLQVNPSS+KC KNHH         + NF  TYSL
Subjt:  FREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS-------ALPNFAPTYSL

A0A1S4E272 uncharacterized protein LOC1079916317.7e-3967.35Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFR
        M DL+ TA  GKFRYRRLRYSEEFEEAFGRSR G    R+     + WF++R        SIGRRLKKLR+PSLRKL+RRK RLV AM+GSI+KV+KRFR
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIR------RASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFR

Query:  EGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSA----LPNFAPTYSL
        +GEAYLGDLFAGNYLFLQVNPSS+KC KNHH      + NF  TYSL
Subjt:  EGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHSA----LPNFAPTYSL

A0A6J1E2Z5 uncharacterized protein LOC1114303122.8e-6595.71Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE-ERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAY
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE  RRRRFVGRSKRWF+IRRASIGRRLKKLRVPSLRKLLRRKSRLVTAM+GSI+KVVKRFREGEAY
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGE-ERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAY

Query:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
        LGDLFAGNYLFLQVNPSSIKCHKNHHSAL NFAPTYSLNL
Subjt:  LGDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL

A0A6J1FMJ7 uncharacterized protein LOC1114453171.5e-3771.01Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL
        M DL+  A   KFRYRRLR+S+E E AF RSR GE+  RRF G     F++RRASIGRRLKKLR+PSLRKL  RKSRLV AM GSISKV+KRFR+GEAYL
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL

Query:  GDLFAGNYLFLQVNPSSIKCHKNHHS-ALPNFAPTYSL
        GDLFAGNYLFLQ+NPSSIKC  NHH   L NF PT+SL
Subjt:  GDLFAGNYLFLQVNPSSIKCHKNHHS-ALPNFAPTYSL

A0A6J1JM01 uncharacterized protein LOC1114870963.2e-69100Show/hide
Query:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL
        MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL
Subjt:  MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYL

Query:  GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
        GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL
Subjt:  GDLFAGNYLFLQVNPSSIKCHKNHHSALPNFAPTYSLNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G14410.1 unknown protein3.1e-0841.86Show/hide
Query:  GEERRRRFVGRSKRWFKIRRASIGRRLK-KLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLFLQVNPSSI
        GE  RRR    S R+ ++      RR++ ++++  LR  +R+K+  V   K  I K++KR +E +++ GDLFAGNYLF+QVNPSS+
Subjt:  GEERRRRFVGRSKRWFKIRRASIGRRLK-KLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLFLQVNPSSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGACCTCGACACCACCGCGCCGCCCGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGACGAGGAGAAGAGAG
GAGGAGGAGATTTGTAGGAAGGTCGAAGCGGTGGTTCAAAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAACTCAGAGTTCCTAGCCTGAGAAAGCTGTTGAGAA
GGAAATCGCGGCTGGTGACGGCCATGAAAGGCTCGATTTCGAAGGTTGTGAAGAGGTTTAGGGAAGGCGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTGTTC
CTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCCAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGACCTCGACACCACCGCGCCGCCCGGCAAGTTCCGGTACCGGAGGCTGAGATACAGCGAGGAATTTGAGGAGGCGTTTGGAAGATCGAGACGAGGAGAAGAGAG
GAGGAGGAGATTTGTAGGAAGGTCGAAGCGGTGGTTCAAAATCAGAAGGGCTTCGATTGGGAGGAGGTTGAAGAAACTCAGAGTTCCTAGCCTGAGAAAGCTGTTGAGAA
GGAAATCGCGGCTGGTGACGGCCATGAAAGGCTCGATTTCGAAGGTTGTGAAGAGGTTTAGGGAAGGCGAAGCGTATTTGGGGGATCTTTTTGCTGGAAATTATTTGTTC
CTTCAGGTGAATCCCAGCTCCATCAAATGCCATAAAAATCACCATTCTGCCCTTCCAAATTTCGCCCCAACTTATTCCCTCAACCTCTAA
Protein sequenceShow/hide protein sequence
MPDLDTTAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVPSLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLF
LQVNPSSIKCHKNHHSALPNFAPTYSLNL