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CmaCh04G027340 (gene) of Cucurbita maxima (Rimu) v1.1 genome

Gene IDCmaCh04G027340
OrganismCucurbita maxima Rimu (Cucurbita maxima (Rimu) v1.1)
DescriptionMetalloendoproteinase 2-MMP-like
Genome locationCma_Chr04:18397862..18399888
RNA-Seq ExpressionCmaCh04G027340
SyntenyCmaCh04G027340
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0030198 - extracellular matrix organization (biological process)
GO:0030574 - collagen catabolic process (biological process)
GO:0031012 - extracellular matrix (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001818 - Peptidase M10, metallopeptidase
IPR024079 - Metallopeptidase, catalytic domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648906.1 hypothetical protein Csa_009291 [Cucumis sativus]2.1e-0666.67Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH
        DIKIS E G+HGD  PFDSVGGV+A AF+PTDGR    A+ H
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH

KAG5535004.1 hypothetical protein RHGRI_022944 [Rhododendron griersonianum]2.1e-0638.83Show/hide
Query:  SIDIKISLESGEHGDA--HPFDSVGGVIARAFSPTDGRYILMALSHGLLLPFLIRLIWRPWRCMRLDTLWAFTTAQWKGVLCCRPSWEELPRVCMPTTPK
        S ++KI     +HGD   + FD  GG +  AF PT+GR+   A     +      LIWR W CMRL T      AQ+  + C R    ELP+VCM TT +
Subjt:  SIDIKISLESGEHGDA--HPFDSVGGVIARAFSPTDGRYILMALSHGLLLPFLIRLIWRPWRCMRLDTLWAFTTAQWKGVLCCRPSWEELPRVCMPTTPK

Query:  AIK
         +K
Subjt:  AIK

XP_004142457.2 metalloendoproteinase 3-MMP [Cucumis sativus]2.1e-0666.67Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH
        DIKIS E G+HGD  PFDSVGGV+A AF+PTDGR    A+ H
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH

XP_038889209.1 metalloendoproteinase 2-MMP-like [Benincasa hispida]2.1e-0682.35Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR
        DIKIS ESG+HGD H FD VGGVIA AFSPTDGR
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR

XP_038891009.1 metalloendoproteinase 2-MMP-like [Benincasa hispida]1.2e-0665.91Show/hide
Query:  SIDIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH
        S DIKIS E G+HGD  PFDSVGGV+A AF+PTDGR    A+ H
Subjt:  SIDIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH

TrEMBL top hitse value%identityAlignment
A0A0A0KS47 ZnMc domain-containing protein1.0e-0666.67Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH
        DIKIS E G+HGD  PFDSVGGV+A AF+PTDGR    A+ H
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH

A0A1S3C925 metalloendoproteinase 2-MMP-like3.8e-0661.9Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH
        DIK++ E G+HGD  PFDSVGGV+A AF+PTDGR    A+ H
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH

A0A5A7T7T1 Metalloendoproteinase 2-MMP-like1.7e-0664.29Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH
        DIK+S E G+HGD  PFDSVGGV+A AF+PTDGR    A+ H
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSH

A0A6J1HJ41 metalloendoproteinase 3-MMP-like6.5e-0669.23Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA
        DIKI  E+G+HGD +PFD VGGVIA AFSP DGR+ L A
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA

A0A6J1JQE4 metalloendoproteinase 2-MMP-like6.5e-0669.23Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA
        DIKI  E+G+HGD +PFD VGGVIA AFSP DGR+ L A
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA

SwissProt top hitse value%identityAlignment
O18767 Matrix metalloproteinase-205.9e-0454.55Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDG
        DI IS E+G+HGD++PFD   G +A AF+P +G
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDG

P29136 Metalloendoproteinase 12.0e-0455.88Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR
        +IKI   S  HGD +PFD  GG++  AF+PTDGR
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR

P57748 Matrix metalloproteinase-205.9e-0454.55Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDG
        DI IS E+G+HGD++PFD   G +A AF+P +G
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDG

P79287 Matrix metalloproteinase-205.9e-0454.55Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDG
        DI IS E+G+HGD++PFD   G +A AF+P +G
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDG

Q8GWW6 Metalloendoproteinase 4-MMP2.0e-0458.82Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR
        DIKI   +G+HGD  PFD V GV+A  FSP +GR
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR

Arabidopsis top hitse value%identityAlignment
AT1G70170.1 matrix metalloproteinase5.5e-0551.28Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA
        DI I   +G+HGD  PFD V G +A AFSP  G++ L A
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA

AT2G45040.1 Matrixin family protein1.4e-0558.82Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR
        DIKI   +G+HGD  PFD V GV+A  FSP +GR
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGR

AT4G16640.1 Matrixin family protein9.3e-0551.28Show/hide
Query:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA
        D+KI   +G+HGD  PFD V G +A AF+P +GR  L A
Subjt:  DIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGATTCATCTTTGGTTGAGAGATGCTAATAATGGAGGCGGAGGGGGGGCTTCCATAGATATCAAAATAAGCTTGGAAAGTGGTGAACATGGAGACGCC
CATCCTTTCGACAGTGTTGGAGGAGTCATAGCTCGTGCCTTTTCGCCCACAGATGGACGTTACATTTTGATGGCGTTGAGTCATGGACTATTGCTGCCGTTCCTA
ATTCGTTTGATATGGAGACCGTGGCGTTGCATGAGATTGGACACCTTATGGGCCTTCACCACAGCTCAGTGGAAGGGGGTATTATGTTGCCGACCATCATGGGAG
GAACTACCAAGGGTTTGCATGCCCACGACGCCCAAAGCCATTAAAGCTCAAGTTCAATGGTTGAGCCCAAAAGCCGTTACAGCCCAATTCATGGGTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTGATTCATCTTTGGTTGAGAGATGCTAATAATGGAGGCGGAGGGGGGGCTTCCATAGATATCAAAATAAGCTTGGAAAGTGGTGAACATGGAGACGCC
CATCCTTTCGACAGTGTTGGAGGAGTCATAGCTCGTGCCTTTTCGCCCACAGATGGACGTTACATTTTGATGGCGTTGAGTCATGGACTATTGCTGCCGTTCCTA
ATTCGTTTGATATGGAGACCGTGGCGTTGCATGAGATTGGACACCTTATGGGCCTTCACCACAGCTCAGTGGAAGGGGGTATTATGTTGCCGACCATCATGGGAG
GAACTACCAAGGGTTTGCATGCCCACGACGCCCAAAGCCATTAAAGCTCAAGTTCAATGGTTGAGCCCAAAAGCCGTTACAGCCCAATTCATGGGTGCATGA
Protein sequenceShow/hide protein sequence
MGLIHLWLRDANNGGGGGASIDIKISLESGEHGDAHPFDSVGGVIARAFSPTDGRYILMALSHGLLLPFLIRLIWRPWRCMRLDTLWAFTTAQWKGVLCCRPSWE
ELPRVCMPTTPKAIKAQVQWLSPKAVTAQFMGA